Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D03
(1199 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D565F8 Cluster: PREDICTED: similar to myb bindin... 85 3e-15
UniRef50_UPI00015B4207 Cluster: PREDICTED: similar to DNA polyme... 78 4e-13
UniRef50_Q17DX3 Cluster: DNA polymerase v; n=1; Aedes aegypti|Re... 61 6e-08
UniRef50_UPI0000E47D89 Cluster: PREDICTED: similar to myb bindin... 55 3e-06
UniRef50_UPI0000ECA339 Cluster: Myb-binding protein 1A.; n=2; Ga... 49 3e-04
UniRef50_Q7QBD6 Cluster: ENSANGP00000014704; n=1; Anopheles gamb... 48 4e-04
UniRef50_UPI0000499954 Cluster: hypothetical protein 268.t00004;... 43 0.018
UniRef50_UPI0000F2E91F Cluster: PREDICTED: similar to myb bindin... 41 0.055
UniRef50_Q6DRL5 Cluster: Myb-binding protein 1A-like protein; n=... 41 0.055
UniRef50_O60094 Cluster: DNA polymerase V; n=1; Schizosaccharomy... 41 0.055
UniRef50_UPI0001555C45 Cluster: PREDICTED: similar to MYB bindin... 38 0.68
UniRef50_Q1FL80 Cluster: DNA polymerase III, delta subunit; n=1;... 36 1.6
UniRef50_A2EHI4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_Q5UQL4 Cluster: Uncharacterized protein L417; n=1; Acan... 35 3.6
UniRef50_A0UVK5 Cluster: Peptidase M16-like precursor; n=1; Clos... 34 6.4
UniRef50_Q09FA3 Cluster: Heme maturase; n=2; Tetrahymena|Rep: He... 34 8.4
UniRef50_P47479 Cluster: Uncharacterized protein MG237; n=2; Myc... 34 8.4
>UniRef50_UPI0000D565F8 Cluster: PREDICTED: similar to myb binding
protein (P160) 1a-like; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to myb binding protein (P160) 1a-like
- Tribolium castaneum
Length = 1103
Score = 85.0 bits (201), Expect = 3e-15
Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 5/157 (3%)
Frame = +1
Query: 103 LKMKDESEXNKPQTQAKVTSFVLESFDLLKAAKDDARLTGGTKIITQLQDNENEK----D 270
+++ + E ++ + K S VL++F L ++ R+ G +I L ++N + +
Sbjct: 7 VEIVENGENHQKTNKRKRESSVLDNFTKLTNGQEKVRVKAGIDLIRHLTSDKNGEQSNDE 66
Query: 271 VQYVLKRLVRSLGANVPDMRTGYFATLVALLTKFDQIXXXXXXXXXXXXXHANGS-SKSE 447
++Y L RL+R LG++ +TG+FA LVALL I H GS SKSE
Sbjct: 67 LKYALGRLIRGLGSSKIHAKTGFFAALVALLN-LKTITIEEIFTHVEKELHKGGSNSKSE 125
Query: 448 VGDVALGQILVCGAVFRSGLIMKCTTEEQTEIIKLLM 558
D+ GQIL+CGA+ RS L C +E+ +++++L+
Sbjct: 126 NADICSGQILLCGAILRSNLYESCDEKEKIKVLEMLL 162
Score = 49.2 bits (112), Expect = 2e-04
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Frame = +3
Query: 567 QKKTYLSTVAYLIFLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMVANKKF 746
++++YL+ + D ++ + F ++++ IK D K + LDSL+ + F
Sbjct: 166 KERSYLNLASCKFLTDLFQQVEQKEFETVIFPLIKNDLAKPWQDQNLDSLFLFLQIQNHF 225
Query: 747 PDVVK---LRKLIGTSEILCEDNIQPVCEKLMTGVDFSSLNHPIYKEIGAQIANSPHLXL 917
P + L+ +GT E++C +++ + L T + S N + + + Q N +
Sbjct: 226 PGFLHAKFLKNNLGTEELICSESLYDLALTLTTDLTVSFFNE-LDRTLIRQNRNKFFVAT 284
Query: 918 FWLSGIDSQLTKHNRNRELVAVN 986
L+GI +L + EL+ N
Sbjct: 285 KLLTGILDELNDFSLIPELLTRN 307
>UniRef50_UPI00015B4207 Cluster: PREDICTED: similar to DNA
polymerase v; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to DNA polymerase v - Nasonia vitripennis
Length = 1220
Score = 78.2 bits (184), Expect = 4e-13
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Frame = +1
Query: 160 SFVLESFDLLKAAKDDARLTGGTKIITQL----QDNENEKDVQYVLKRLVRSLGANVPDM 327
S VLE F L RL G K+I L Q+N K++ +VL RLVR LG++
Sbjct: 3 STVLECFPKLLRDNAGERLDGAFKLIQHLSREAQENGESKELNHVLNRLVRGLGSSKVSS 62
Query: 328 RTGYFATLVALLTKFDQIXXXXXXXXXXXXXHANGS-SKSEVGDVALGQILVCGAVFRSG 504
R G+++TL L + + S SK E D++ G+IL CGA+ RS
Sbjct: 63 RKGFYSTLTVYLALNPDVTLERIFGIMDNELKTSSSNSKGEFADISNGRILACGAIIRSK 122
Query: 505 LIMKCTTEEQTEIIKLLM 558
+I C+ EEQ ++++ L+
Sbjct: 123 MIKTCSVEEQQKVLECLI 140
Score = 70.1 bits (164), Expect = 1e-10
Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Frame = +3
Query: 567 QKKTYLSTVAYLIFLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMVANKKF 746
++++YL + ++F+N L+ + VW ++Q K E TLD+ Y L+V KF
Sbjct: 144 KQRSYLGFESVSFIIEFLNQLEDDESLKAVWPVLEQGICKPFKEQTLDTFYALLVVQDKF 203
Query: 747 PDVVK---LRKLIGTSEILCEDNIQPVCEKLMTGVD-FSSLNHPIYKEIGAQIANSPHLX 914
P V+ L+K G+ I+ E++++ + K++T + S HP+YK ++ + +
Sbjct: 204 PGVLSKKVLKKTFGSENIINEESMKDIL-KILTDIPRVISYKHPVYKIFCEKLIATELVE 262
Query: 915 LFWLSGIDSQLTKHNRNRELVAVNI 989
FW +GID K ++ E + V +
Sbjct: 263 QFW-NGIDECFIKPSKTDEYLGVEL 286
>UniRef50_Q17DX3 Cluster: DNA polymerase v; n=1; Aedes aegypti|Rep:
DNA polymerase v - Aedes aegypti (Yellowfever mosquito)
Length = 1180
Score = 60.9 bits (141), Expect = 6e-08
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Frame = +3
Query: 582 LSTVAYLIFLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMVA---NKKFPD 752
++ +A + + + +D + FT ++W I+ +EHT+D++YFL+ A +KK +
Sbjct: 169 VTPLAIMYLSELVQKIDTKKFTKVLWPVIEPVVNVPKAEHTMDTIYFLLAASSVHKKSVN 228
Query: 753 VVKLRKLIGTSEILCEDNIQPVCEKLMTGVDFSSLNHPIYKEIGAQIANSPHLXLFWLSG 932
++ E+N + + L D ++NHP+Y + Q+ + FW G
Sbjct: 229 QKFFESNFNAPHLIHEENYEFLASLLWDIKDTLTINHPLYDFLIEQLVKQNKVGEFWAQG 288
Query: 933 IDSQLTKH---NRNRELVAVNI 989
+D L +R ++LVA+ +
Sbjct: 289 VDPILVDEGSTHRFKDLVALRV 310
Score = 52.4 bits (120), Expect = 2e-05
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Frame = +1
Query: 133 KPQTQAK----VTSFVLESFDLLKAAKDDARLTGGTKIITQL-------QDNENEKDVQY 279
KP+T+ K + V + F+ L ++ RL G +++I L ++++EK+ Y
Sbjct: 2 KPKTEGKSGKLLDKTVFKFFEKLINQDENIRLRGASELIQFLCAGNDGSAEDKHEKERAY 61
Query: 280 VLKRLVRSLGANVPDMRTGYFATLVALL--TKFDQIXXXXXXXXXXXXXHANGSSKSEVG 453
LKRL+R +G+N R G+F LV L K + + K E
Sbjct: 62 ALKRLIRGVGSNNHTSRAGFFTALVGYLQQVKESDHCPSVTEIFKLVKSELSDTDKGEED 121
Query: 454 ------DVALGQILVCGAVFRSGLIMKCTTEEQTEIIKLL 555
++ +G++ VCGA+ SGLI + E ++K L
Sbjct: 122 TQQTKLELRVGKVSVCGAIINSGLIENASDMELQTVLKAL 161
>UniRef50_UPI0000E47D89 Cluster: PREDICTED: similar to myb binding
protein (P160) 1a-like; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to myb binding
protein (P160) 1a-like - Strongylocentrotus purpuratus
Length = 1026
Score = 55.2 bits (127), Expect = 3e-06
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Frame = +1
Query: 130 NKPQTQAKVTSFVLESFDLLKAAKDDARLTGGTKIITQLQDNENE-------KDVQYVLK 288
N+ T++ L++F L D+ R++G T ++ L +NE +V Y L+
Sbjct: 15 NENSTKSPADKQFLDTFWKLAVPSDNERISGATTLLQILIKKQNETKEDKYCSEVTYSLR 74
Query: 289 RLVRSLGANVPDMRTGYFATLVALLTKFDQIXXXXXXXXXXXXXHANGSSKSEVGDVALG 468
RLVR L ++ R GY L LL+K +I +G KSE + A G
Sbjct: 75 RLVRGLASSRKGARQGYAIALTELLSKVKEIALEDVFKLMKQELQVSG-KKSEEKEYAFG 133
Query: 469 QILVCGAVFRSGLIMKCTTEEQTEIIKLLM 558
Q+ AV +SG + + I++ L+
Sbjct: 134 QVFAYLAVIQSGRLNEHNGASSVHILEQLL 163
Score = 44.8 bits (101), Expect = 0.004
Identities = 27/89 (30%), Positives = 42/89 (47%)
Frame = +3
Query: 567 QKKTYLSTVAYLIFLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMVANKKF 746
Q+KTYL + +D I E FT +W +K D K+ E + ++L LMV +KF
Sbjct: 167 QQKTYLQLICLQGVIDLIKRSSAELFTDHIWPVLKADMKQGWEEVSPNNLALLMVCRQKF 226
Query: 747 PDVVKLRKLIGTSEILCEDNIQPVCEKLM 833
P S ++ + PVC+ L+
Sbjct: 227 P----------KSTLISHPIVHPVCDMLL 245
>UniRef50_UPI0000ECA339 Cluster: Myb-binding protein 1A.; n=2;
Gallus gallus|Rep: Myb-binding protein 1A. - Gallus
gallus
Length = 1183
Score = 48.8 bits (111), Expect = 3e-04
Identities = 29/113 (25%), Positives = 52/113 (46%)
Frame = +1
Query: 178 FDLLKAAKDDARLTGGTKIITQLQDNENEKDVQYVLKRLVRSLGANVPDMRTGYFATLVA 357
+D+ K + + RL ++ L+D +++++Y L+RLV LGA R G+ L
Sbjct: 31 WDIAKP-EQEVRLAATENLLRHLRDGGEDEELKYALRRLVEGLGATREAARPGFSLALAQ 89
Query: 358 LLTKFDQIXXXXXXXXXXXXXHANGSSKSEVGDVALGQILVCGAVFRSGLIMK 516
+L F++I + K V + A G A+F+SG ++K
Sbjct: 90 VLQAFEEIPLCSVLEQIQEKHNLEKVKKKLVRNAAFGNFFGVMALFQSGRLIK 142
>UniRef50_Q7QBD6 Cluster: ENSANGP00000014704; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000014704 - Anopheles gambiae
str. PEST
Length = 1384
Score = 48.4 bits (110), Expect = 4e-04
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Frame = +1
Query: 268 DVQYVLKRLVRSLGANVPDMRTGYFATLVALLTKFDQIXXXXXXXXXXXXXHANGSSKSE 447
+ Y LKRLVR +G+ D R G+F LV LL + + ++SE
Sbjct: 69 ETAYALKRLVRGVGSMQNDSRIGFFTALVGLLERLRGREDECPSVTELFTLVKSELTESE 128
Query: 448 VG-----------DVALGQILVCGAVFRSGLIMKCTTEEQTEIIKLL 555
+G ++ +G+ILVCGA+ +SGLI + E ++K L
Sbjct: 129 LGEGEEEKHKTPLELRIGKILVCGAIIKSGLIDDASELELQTVLKTL 175
Score = 40.3 bits (90), Expect = 0.097
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +3
Query: 582 LSTVAYLIFLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMV----ANKKFP 749
L + Y + N L+ F+ + W + +HT+DS +FL+ +KK
Sbjct: 183 LVPLVYTFLNELANRLEASKFSKVFWPVFEPVLNVPKEKHTIDSAFFLLQLSTGPHKKLI 242
Query: 750 DVVKLRKLIGTSEILCEDNIQPVCEKLMTGVDFS-SLNHPIYK 875
+ + G ++L E N P +L+ G+ + +NHP Y+
Sbjct: 243 NQKYFERNFGAPKLLHEHNF-PFLAQLLFGIGSTMGINHPFYE 284
>UniRef50_UPI0000499954 Cluster: hypothetical protein 268.t00004;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 268.t00004 - Entamoeba histolytica HM-1:IMSS
Length = 930
Score = 42.7 bits (96), Expect = 0.018
Identities = 24/101 (23%), Positives = 48/101 (47%)
Frame = +1
Query: 229 KIITQLQDNENEKDVQYVLKRLVRSLGANVPDMRTGYFATLVALLTKFDQIXXXXXXXXX 408
K +++++ E+ + + Y L RL++SLG++ R G L+ LL F I
Sbjct: 32 KAESEIKNGEHSEVMVYSLNRLIKSLGSSHDCARDGNLLCLILLLQTFPSIQESSVVDIA 91
Query: 409 XXXXHANGSSKSEVGDVALGQILVCGAVFRSGLIMKCTTEE 531
G+++ + DV G++ C A+ ++ + + T E
Sbjct: 92 TSTFTTTGNARQALRDVLFGRLCTCLALIKAQRVNETETVE 132
>UniRef50_UPI0000F2E91F Cluster: PREDICTED: similar to myb binding
protein (P160) 1a-like; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to myb binding protein (P160) 1a-like
- Monodelphis domestica
Length = 1786
Score = 41.1 bits (92), Expect = 0.055
Identities = 28/111 (25%), Positives = 48/111 (43%)
Frame = +1
Query: 184 LLKAAKDDARLTGGTKIITQLQDNENEKDVQYVLKRLVRSLGANVPDMRTGYFATLVALL 363
+ K A+++ RL ++ +L++ E ++QY LKRL+ LGA R G+ L +L
Sbjct: 74 IAKPAQEE-RLAATAALVGRLRERPQEAELQYALKRLIEGLGATREAARPGFSLALSQVL 132
Query: 364 TKFDQIXXXXXXXXXXXXXHANGSSKSEVGDVALGQILVCGAVFRSGLIMK 516
D + K + A G A+F+SG ++K
Sbjct: 133 QALDHVPLRRVWEQVKEKHDL--QKKKLLRSAAFGNFFGVLALFQSGRLVK 181
>UniRef50_Q6DRL5 Cluster: Myb-binding protein 1A-like protein; n=8;
Clupeocephala|Rep: Myb-binding protein 1A-like protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1269
Score = 41.1 bits (92), Expect = 0.055
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +1
Query: 211 RLTGGTKIITQLQDNENEKDVQYVLKRLVRSLGANVPDMRTGYFATLVALLTKFDQI 381
RL +I L+++E +++Y LKRLV L D R+GY L LL+ F++I
Sbjct: 49 RLKAIEDLINYLKNSEQADELKYTLKRLVDGLSHTREDARSGYSVALAQLLSVFEEI 105
>UniRef50_O60094 Cluster: DNA polymerase V; n=1; Schizosaccharomyces
pombe|Rep: DNA polymerase V - Schizosaccharomyces pombe
(Fission yeast)
Length = 959
Score = 41.1 bits (92), Expect = 0.055
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = +1
Query: 157 TSFVLESFDLLKAAKDDARLTGGTKIITQLQDNENEKDVQYVLKRLVRSLGANVPDMRTG 336
T LE F L + RL+ ++I L NE++++Y L RL + L + R G
Sbjct: 3 TKTQLELFTKLTSNDKAIRLSSAAQLIDSLS---NEEELKYSLNRLTKGLSSGRESARIG 59
Query: 337 YFATLVALLTKFDQIXXXXXXXXXXXXXHANGSSK-SEVGDVALGQILVCGAVFRSGLI- 510
+ L LLT+ I A+G+ K + D G + ++ SG++
Sbjct: 60 FAVALTELLTRTKDIRATHVLDLLVKHNTASGNLKGQDERDFYFGLLFGLQSIVYSGILT 119
Query: 511 -MKCTTEEQTEIIKLLM 558
+ T E+ ++ LL+
Sbjct: 120 HKESTIEDFQRVVDLLL 136
>UniRef50_UPI0001555C45 Cluster: PREDICTED: similar to MYB binding
protein (P160) 1a, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to MYB binding protein
(P160) 1a, partial - Ornithorhynchus anatinus
Length = 1193
Score = 37.5 bits (83), Expect = 0.68
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +3
Query: 552 LNECKQKKTYLSTVAYLIFLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMV 731
L Q++++L +D ++ + F S++ ++ D L+ + L+ L+V
Sbjct: 75 LQRLDQQRSHLQDQPRKALVDILSEVPEAVFESVLLDVLRTDLTSALNSP--EQLHLLLV 132
Query: 732 ANKKFPDVV---KLRKLIGTSEILCEDNI 809
++FP V+ KL+KL+G+S I ++NI
Sbjct: 133 GLQRFPGVLQPKKLQKLLGSSSIFTKENI 161
>UniRef50_Q1FL80 Cluster: DNA polymerase III, delta subunit; n=1;
Clostridium phytofermentans ISDg|Rep: DNA polymerase
III, delta subunit - Clostridium phytofermentans ISDg
Length = 325
Score = 36.3 bits (80), Expect = 1.6
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = +3
Query: 555 NECKQKKTYLSTVAYLIFLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMVA 734
NE ++ V L ++ +NGLD ++ V S ++++ KK +++ TL YFL
Sbjct: 108 NEVDKRNRLYKAVKDLGYISELNGLDEKSLKMWVVSLLQRENKK-ITDATLT--YFLNKV 164
Query: 735 NKKFPDVV-KLRKLIG---TSEILCEDNIQPVCEKLMTGVDFSSLN 860
++ ++ KL+ E++ E++I+ VC + +TG F L+
Sbjct: 165 GTNLDNIQSEIDKLVSYCYEREVITEEDIKAVCSEQITGKMFQMLD 210
>UniRef50_A2EHI4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 802
Score = 36.3 bits (80), Expect = 1.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 229 KIITQLQDNENEKDVQYVLKRLVRSLGANVPDM 327
++I L +NE E D Y++ L+ S G NVPD+
Sbjct: 543 QLIDALLNNEREDDAMYIMASLIESFGENVPDL 575
>UniRef50_Q5UQL4 Cluster: Uncharacterized protein L417; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L417 - Mimivirus
Length = 491
Score = 35.1 bits (77), Expect = 3.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 795 CEDNI-QPVCEKLMTGVDFSSLNHPIYKEIGAQIANSPHLXLFWLSGID 938
C +NI Q +C+ G+ S+L H Y E G N+P+L + +D
Sbjct: 104 CNNNISQAICQNFYNGLSTSALIHRCYAECGKDAHNNPYLFFHGVEPLD 152
>UniRef50_A0UVK5 Cluster: Peptidase M16-like precursor; n=1;
Clostridium cellulolyticum H10|Rep: Peptidase M16-like
precursor - Clostridium cellulolyticum H10
Length = 1137
Score = 34.3 bits (75), Expect = 6.4
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 573 KTYLSTVAYLIFLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMVANKK 743
K L T+ + FIN +NFT+ S++ +D +L+E LD +Y V N K
Sbjct: 116 KNVLFTILNQTYSTFINAFTAQNFTTYPVSSLSEDQLLKLAEVYLDCVYHPSVYNDK 172
>UniRef50_Q09FA3 Cluster: Heme maturase; n=2; Tetrahymena|Rep: Heme
maturase - Tetrahymena malaccensis
Length = 519
Score = 33.9 bits (74), Expect = 8.4
Identities = 20/71 (28%), Positives = 41/71 (57%)
Frame = -3
Query: 285 QYILYVFFILIVLQLCYNFGTSC*SSIVFRSFK*IKRF*HKRSYFGLRLRLVXFTFVFHF 106
Q+I+Y++ I++V+ L NF ++++ K IK F K+ ++ L ++ ++F
Sbjct: 260 QFIMYIWLIILVIILILNFQIIKFNNLI----KNIKIFNIKQKFYNLIFYIIVINLFYNF 315
Query: 105 ELN*TIQTKLN 73
+LN T+Q +N
Sbjct: 316 KLN-TLQLFIN 325
>UniRef50_P47479 Cluster: Uncharacterized protein MG237; n=2;
Mycoplasma|Rep: Uncharacterized protein MG237 -
Mycoplasma genitalium
Length = 294
Score = 33.9 bits (74), Expect = 8.4
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Frame = +3
Query: 606 FLDFINGLDVENFTSIVWSNIKQDFKKELSEHTLDSLYFLMVANKKFPDVVKLRKLIGTS 785
FL+ ++GL ++F+ + ++++ FKK LSE+ + F +K +VK +K T+
Sbjct: 8 FLNHLDGLK-QHFSD--YDSLQKSFKKYLSENQTELNNFFFNQFEKIIVLVK-KKEFKTA 63
Query: 786 EILCEDNI-QPVCEKLMTGVDFSSL----NHPIYKEIGAQIAN 899
+ CE+ + P K + G F SL NH + ++ Q+AN
Sbjct: 64 QERCEEELATPYFSKPLVGF-FQSLLQLINHDLIEQKNQQLAN 105
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 941,686,038
Number of Sequences: 1657284
Number of extensions: 17100190
Number of successful extensions: 40862
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 39355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40852
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 120758430771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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