Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_D02
         (1203 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   5.5  
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148...    29   7.3  

>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/60 (28%), Positives = 18/60 (30%)
 Frame = -1

Query: 900 GXTXXPPLXXLXPLPXAXRPXAXXHXRGXGXAPHXXTASPRAVADSXXXXKPPXPPPXPG 721
           G    PP     P P    P       G G  P    A+P A         PP PP   G
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAG 378


>02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,
            14807-14887,14980-15044,15357-15497,15578-15694,
            15995-16237,16326-16383,18127-18224
          Length = 638

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -3

Query: 1156 GXGXXGGXPGGXXPGGXXXGXXXXPXXGXPP 1064
            G G  GG PGG  PGG   G       G  P
Sbjct: 547  GGGFPGGMPGGGFPGGMPGGFPGGAMPGGVP 577


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,845,729
Number of Sequences: 37544
Number of extensions: 335723
Number of successful extensions: 1256
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3678130032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)