Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D02
(1203 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 36 0.057
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 2.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 2.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 2.1
Z77660-2|CAB01176.1| 361|Caenorhabditis elegans Hypothetical pr... 30 3.7
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 30 3.7
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 30 3.7
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 30 3.7
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.057
Identities = 30/108 (27%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXPGXXXKXXXGXS--PPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G S PP F G
Sbjct: 150 GPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSG 209
Query: 1010 XPXGX--------NXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P G + PGPF A G F P +P GG P
Sbjct: 210 GPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPP 257
Score = 35.9 bits (79), Expect = 0.057
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 240 GPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 299
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 300 GP-------PGPFDPSGAQPSGGPPGPFNPSGAPPSGGPP 332
Score = 35.5 bits (78), Expect = 0.075
Identities = 29/108 (26%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 255 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSG 314
Query: 1010 XPXGX--------NXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P G + PGPF A G F P +P GG P
Sbjct: 315 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPP 362
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 285 GPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 344
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 345 GP-------PGPFNPSGAPPSGGPPGPFDPSGAPPSGGPP 377
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 300 GPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSG 359
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 360 GP-------PGPFDPSGAPPSGGPPGPFDPSGAPPSGGPP 392
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 315 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 374
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 375 GP-------PGPFDPSGAPPSGGPPGPFDPSGAPPSGGPP 407
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 330 GPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 389
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 390 GP-------PGPFDPSGAPPSGGPPGPFNPSGAPPSGGPP 422
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 345 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 404
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 405 GP-------PGPFNPSGAPPSGGPPGPFNPSGAPPSGGPP 437
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 360 GPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSG 419
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 420 GP-------PGPFNPSGAPPSGGPPGPFNPSGAPPSGGPP 452
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 375 GPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 434
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 435 GP-------PGPFNPSGAPPSGGPPGPFNPSGAPPSGGPP 467
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 390 GPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 449
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 450 GP-------PGPFNPSGAPPSGGPPGPFNPSGAPPSGGPP 482
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 405 GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 464
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 465 GP-------PGPFNPSGAPPSGGPPGPFDPSGAPPSGGPP 497
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 420 GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 479
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P GG P
Sbjct: 480 GP-------PGPFDPSGAPPSGGPPGPFNPSGAPPSGGPP 512
Score = 31.9 bits (69), Expect = 0.93
Identities = 27/100 (27%), Positives = 29/100 (29%), Gaps = 2/100 (2%)
Frame = -2
Query: 1184 GPXXPXXXXGXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGG 1011
GP P G GG P P G P G +PP F G
Sbjct: 435 GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 494
Query: 1010 XPXGXNXXXPGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
P PGPF A G F P +P G P
Sbjct: 495 GP-------PGPFNPSGAPPSGGPPGPFDPSGAPPSGMPP 527
Score = 29.5 bits (63), Expect = 5.0
Identities = 25/91 (27%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Frame = -2
Query: 1157 GXXXXGGXPXGXXPGGXXP--GXXXKXXXGXSPPXXXXXXXFXXXXXXGGGXPXGXNXXX 984
G GG P P G P G +PP F G P
Sbjct: 144 GAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGP------- 196
Query: 983 PGPFXGXXALXXGXXXXXFFPXVSPDXGGXP 891
PGPF A G F P +P GG P
Sbjct: 197 PGPFNPSEAPPSGGPTGPFDPSGAPPSGGPP 227
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 966 PXKXAGXXGVXPXGXXPPXXXXXXKXXXPXXXGGGXPXXGLXXXPXXXPPGXXPPGXPPX 1145
P G P G PP P GG P P PPG PP PP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 1146 XP 1151
P
Sbjct: 776 PP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 966 PXKXAGXXGVXPXGXXPPXXXXXXKXXXPXXXGGGXPXXGLXXXPXXXPPGXXPPGXPPX 1145
P G P G PP P GG P P PPG PP PP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 1146 XP 1151
P
Sbjct: 776 PP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 966 PXKXAGXXGVXPXGXXPPXXXXXXKXXXPXXXGGGXPXXGLXXXPXXXPPGXXPPGXPPX 1145
P G P G PP P GG P P PPG PP PP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 1146 XP 1151
P
Sbjct: 359 PP 360
>Z77660-2|CAB01176.1| 361|Caenorhabditis elegans Hypothetical
protein F38H4.2 protein.
Length = 361
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 176 SGGNFGDEVNTLKHVFDIVTRE 241
S GN GD ++LKH FDI++ +
Sbjct: 316 SNGNIGDNSSSLKHGFDIISND 337
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Frame = +3
Query: 990 GVXPXGXXPPXXXXXXKXXXPXXXGGGXPXXGLXXXPXXXPP-----GXXPPGXPPXXPX 1154
G+ P G PP P G P GL P PP G P PP P
Sbjct: 81 GMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPP 140
Query: 1155 P 1157
P
Sbjct: 141 P 141
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Frame = +3
Query: 990 GVXPXGXXPPXXXXXXKXXXPXXXGGGXPXXGLXXXPXXXPP-----GXXPPGXPPXXPX 1154
G+ P G PP P G P GL P PP G P PP P
Sbjct: 104 GMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPP 163
Query: 1155 P 1157
P
Sbjct: 164 P 164
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Frame = +3
Query: 990 GVXPXGXXPPXXXXXXKXXXPXXXGGGXPXXGLXXXPXXXPP-----GXXPPGXPPXXPX 1154
G+ P G PP P G P GL P PP G P PP P
Sbjct: 354 GMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPP 413
Query: 1155 P 1157
P
Sbjct: 414 P 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,342,459
Number of Sequences: 27780
Number of extensions: 288225
Number of successful extensions: 807
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3307723186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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