Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D01
(1218 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 44 3e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.011
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.32
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.99
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.3
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 9.2
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 44.4 bits (100), Expect = 3e-05
Identities = 40/143 (27%), Positives = 42/143 (29%), Gaps = 2/143 (1%)
Frame = +3
Query: 402 PPXPGXXGXXFXAPXPSPPXXTXXPXXPGGGRGXPPXXGGKRXPXKTGGXPXKKIXXKXP 581
PP P AP P P + P P G PP P +G P K P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS-GAPPV------PAPSGIPPVPKPSVAAP 1102
Query: 582 XXGXKPKXXPXXGXSPXAPPPXKXS--KKPXPXXXGXNPXXXXKXPGXPPXKPPXXPPXP 755
P APP K S P P G P P P PP P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 756 XPXXKXKPCPFXPXXXGGPSPKP 824
P P P P P PKP
Sbjct: 1163 KPSVAAPPVP-APSSGIPPVPKP 1184
Score = 42.7 bits (96), Expect = 1e-04
Identities = 38/142 (26%), Positives = 39/142 (27%), Gaps = 1/142 (0%)
Frame = +3
Query: 402 PPXPGXXGXXFXAPXPSPPXXTXXPXXPGGGRGXP-PXXGGKRXPXKTGGXPXKKIXXKX 578
PP P G P P P P G P P P +G P K
Sbjct: 1112 PPVPAPSGAP---PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK----- 1163
Query: 579 PXXGXKPKXXPXXGXSPXAPPPXKXSKKPXPXXXGXNPXXXXKXPGXPPXKPPXXPPXPX 758
P P P G P P P P P P PP P PP P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP--PSTAPPVPT 1221
Query: 759 PXXKXKPCPFXPXXXGGPSPKP 824
P P P P P P P
Sbjct: 1222 PSAGLPPVP-VPTAKAPPVPAP 1242
Score = 39.9 bits (89), Expect = 7e-04
Identities = 35/130 (26%), Positives = 38/130 (29%), Gaps = 2/130 (1%)
Frame = +3
Query: 441 PXPSPPXXTXXPXXPGGGRGXP-PXXGGKRXPXKTGGXPXKKIXXKXPXXGXKPKXXPXX 617
P P P P G P P P +G P K P P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK-----PSVAAPP--VPAP 1155
Query: 618 GXSPXAPPPXKXSKKPXPXXXGXNPXXXXKXPGXPPXKPPXX-PPXPXPXXKXKPCPFXP 794
+P P P + P P P G PP PP PP P P P P P
Sbjct: 1156 SGAPPVPKP-SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP--P 1212
Query: 795 XXXGGPSPKP 824
P P P
Sbjct: 1213 PSTAPPVPTP 1222
Score = 36.3 bits (80), Expect = 0.009
Identities = 36/144 (25%), Positives = 38/144 (26%), Gaps = 4/144 (2%)
Frame = +3
Query: 405 PXPGXXGXXFXAPXPSPPXX--TXXPXXPGGGRGXPPXXGGKRXPXKTGGXPXKKIXXKX 578
P P P +PP T P P G P P + P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP--PPVPAPSSEIPSIPAPSGA 1082
Query: 579 PXXGXKPKXXPXXGXSPXAPPPXKXSKK--PXPXXXGXNPXXXXKXPGXPPXKPPXXPPX 752
P P S APP K S P P G P P P PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 753 PXPXXKXKPCPFXPXXXGGPSPKP 824
P P P P P PKP
Sbjct: 1143 PKPSVAAPPVP--APSGAPPVPKP 1164
Score = 30.3 bits (65), Expect = 0.57
Identities = 29/141 (20%), Positives = 32/141 (22%)
Frame = +3
Query: 441 PXPSPPXXTXXPXXPGGGRGXPPXXGGKRXPXKTGGXPXKKIXXKXPXXGXKPKXXPXXG 620
P P P P P P + G P P + P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAP--SAPPPVPAPSSEIPSIPAPS 1080
Query: 621 XSPXAPPPXKXSKKPXPXXXGXNPXXXXKXPGXPPXKPPXXPPXPXPXXKXKPCPFXPXX 800
+P P P P P P P P PP P P P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAP-PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA 1139
Query: 801 XGGPSPKPXXXXSXXGXGXPP 863
P P G PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPP 1160
Score = 29.9 bits (64), Expect = 0.75
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 388 PXKKTPXPRGXGGXXXGPPPXPPPXKPXXPGFXGGXGXXPPXXGEKGXPXKP 543
P P P+ G PPP P P P G PP G P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAP-SSEIPSIPAPSG-APPVPAPSGIPPVP 1095
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.011
Identities = 32/91 (35%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Frame = -2
Query: 668 GGFF*XFXGGGGXWGXPXXRXXFGFXAXXGPFXXNFFXGXSPGFXGXP--FSPXXGGXXP 495
GG F F GG G G P FG G G GF G P F GG
Sbjct: 187 GGGFGGFGGGSG--GPPPGPGGFGGFGGFG--GEGHHHGGHGGFGGGPGGFEGGPGGFG- 241
Query: 494 XPPXXPGXXGXXGGGXGGGPKXXPPXPRGXG 402
PG G GG GGGP P G G
Sbjct: 242 ---GGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 33.5 bits (73), Expect = 0.061
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 6/72 (8%)
Frame = -3
Query: 823 GFGXGPPFXXGXKGXGFXXXXGX------GXGGXXGGFXGGXPGXFXXXXGFXPXXXGXG 662
G G PP G G G G G GG GGF GG G GF G G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 661 FFXXFXGGGAXG 626
GGG G
Sbjct: 256 GGPGGFGGGPGG 267
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 476 GXXGXXGGGXGGGPKXXPPXPRGXGVF 396
G G GG GGG PP P G G F
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGF 210
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.32
Identities = 34/156 (21%), Positives = 38/156 (24%), Gaps = 2/156 (1%)
Frame = +3
Query: 402 PPXPGXXGXXFXAPXPSPPXXTXXPXXP--GGGRGXPPXXGGKRXPXKTGGXPXKKIXXK 575
PP P P PP P GR PP + P TG P +
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP-STGRQPPPLSSSR 383
Query: 576 XPXXGXKPKXXPXXGXSPXAPPPXKXSKKPXPXXXGXNPXXXXKXPGXPPXKPPXXPPXP 755
P +P PP S+ P P PP PP PP
Sbjct: 384 AVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP--------TPPSLPPSAPPSLPPSA 435
Query: 756 XPXXKXKPCPFXPXXXGGPSPKPXXXXSXXGXGXPP 863
P P P P PP
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 30.7 bits (66), Expect = 0.43
Identities = 32/132 (24%), Positives = 34/132 (25%), Gaps = 3/132 (2%)
Frame = +3
Query: 438 APXPSPPXXTXXPXXPGGGRGXPPXXGGK---RXPXKTGGXPXKKIXXKXPXXGXKPKXX 608
AP P PP P GR PP + P P + P
Sbjct: 360 APPPPPPRSA-----PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 609 PXXGXSPXAPPPXKXSKKPXPXXXGXNPXXXXKXPGXPPXKPPXXPPXPXPXXKXKPCPF 788
P P PP S P P P PP PP P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAP-----PSLPMGAPAAPPL-PPSAPIAPPLPAGMPAAPP 468
Query: 789 XPXXXGGPSPKP 824
P P P P
Sbjct: 469 LPPAAPAPPPAP 480
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.99
Identities = 30/130 (23%), Positives = 33/130 (25%), Gaps = 5/130 (3%)
Frame = +3
Query: 450 SPPXXTXXPXXPGGGRGXPPXXGGKRXPXK----TGGXPXKKIXXKXPXXGXKPKXX-PX 614
+PP T P P P GG P + K P P
Sbjct: 72 APPVPTGAPSLPTSSNNTQQAEERPSMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPP 131
Query: 615 XGXSPXAPPPXKXSKKPXPXXXGXNPXXXXKXPGXPPXKPPXXPPXPXPXXKXKPCPFXP 794
S PP S P P +P P P P PP P K P P
Sbjct: 132 TPQSELRPPT---SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 795 XXXGGPSPKP 824
P P
Sbjct: 189 SLPSAVPPMP 198
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +3
Query: 597 PKXXPXXGXSPXAPPPXKXSKKPXPXXXGXNPXXXXKXPGXPPXKPPXXPPXPXPXXKXK 776
P P APP P P P P PP PP PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP--PPLPASSAPSV 1743
Query: 777 PCP 785
P P
Sbjct: 1744 PNP 1746
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +3
Query: 720 PPXKPPXXPPXPXPXXKXKPCPFXPXXXGGPSPKPXXXXSXXGXGXPP 863
PP P P P P P P P G P P P + G PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPP-APIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 397 KTPXPRGXGGXXXGPPPXPPPXKPXXPGFXGGXGXXPPXXGEKGXPXKPGEXP 555
K+P P P P P P P P GG PP G G P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAP-IMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.3 bits (60), Expect = 2.3
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 723 PXKPPXXPPXPXPXXKXKPCPFXPXXXGGPSPKPXXXXSXXGXGXPP 863
P PP P P P P GGP P P G G PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGP-PPPPPPPGVAGAGPPP 777
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 401 PPXPGXXGXXFXGPXPXPPPXNPGPXXSXGG 493
PP P G GP P PPP P S GG
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP---PAVSAGG 789
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 403 PXPRGXGGXXXGPPPXPPP 459
P P G G PPP PPP
Sbjct: 765 PPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 5.3
Identities = 22/88 (25%), Positives = 26/88 (29%)
Frame = +3
Query: 558 KKIXXKXPXXGXKPKXXPXXGXSPXAPPPXKXSKKPXPXXXGXNPXXXXKXPGXPPXKPP 737
+K+ K P P +P PP P P G P PG PP
Sbjct: 725 QKLLLKSPPPPPPAVIVPTPAPAPIPVPP------PAPIMGG--PPPPPPPPGVAGAGPP 776
Query: 738 XXPPXPXPXXKXKPCPFXPXXXGGPSPK 821
PP P + P P PK
Sbjct: 777 PPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 504 GXPXPPXEXXGPGFXGGGXGXGP 436
G P P G GF GGG G P
Sbjct: 78 GQPGGPGGGPGEGFPGGGFGFDP 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.148 0.491
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,343,571
Number of Sequences: 5004
Number of extensions: 30501
Number of successful extensions: 122
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 659412242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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