Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_C22
         (1214 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.84 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   1.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.9  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   4.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.84
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 285 PXXPPPPRGGXPXXXXXNPPXGGP 356
           P  PPPP  G P       P GGP
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 27.1 bits (57), Expect = 1.1
 Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
 Frame = +2

Query: 338 PPXG----GPXXPGGXXKPPPPXPPXG 406
           PP G    G    GG   PPPP PP G
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGG 538



 Score = 26.2 bits (55), Expect = 1.9
 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
 Frame = +1

Query: 340 PPGGAXXP----RGXXKTPPPXPPPGXXXEKXPP 429
           PP GA        G    PPP PPPG      PP
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPP 545



 Score = 24.6 bits (51), Expect = 5.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 243 GGGXPKKKXXGGXTPXXPPPPRGG 314
           G G   +   GG     PPPP GG
Sbjct: 515 GAGYDGRDLTGGPLGPPPPPPPGG 538



 Score = 24.6 bits (51), Expect = 5.9
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 341 PXGGPXXPGGXXKPPPPXPP 400
           P G P  P     P PP PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPP 589


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect(2) = 1.3
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 428 GGFFSXXXPGGGXGGG 381
           GG      PGGG GGG
Sbjct: 216 GGSSGGPGPGGGGGGG 231



 Score = 21.8 bits (44), Expect(2) = 1.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 401 GGGXGGGVFXXPRGXXAP 348
           GGG GGG+    RG   P
Sbjct: 250 GGGGGGGMQLDGRGNAIP 267


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +1

Query: 340 PPGGAXXPRGXXKTPPPXPPPGXXXEKXP 426
           PPG    PR    T P  P PG    + P
Sbjct: 194 PPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 249 GXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXG 350
           G P +K   G TP   PP R G P     N P G
Sbjct: 696 GAPGEKGQKGETPQL-PPQRKGPPGPPGFNGPKG 728


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 434 PXGGFFSXXXPGGGXGGGVFXXPRGXXAPPGG 339
           P GG +S    G G G G F    G  A   G
Sbjct: 23  PGGGVYSTGPAGNGTGSGGFGALAGSNASSAG 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,692
Number of Sequences: 2352
Number of extensions: 7111
Number of successful extensions: 74
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138156486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)