Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C22
(1214 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 41 0.002
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.18
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.18
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.23
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.23
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.23
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.54
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 33 0.54
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 33 0.54
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.71
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.71
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.71
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.94
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.94
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.94
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.94
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 32 0.94
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 27 1.3
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 27 1.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 2.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 2.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 2.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 27 2.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 27 2.8
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 27 2.8
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 25 2.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.9
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 3.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.8
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 29 5.0
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 5.0
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 5.0
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 5.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.6
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 6.6
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.6
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 6.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.6
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 25 7.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 8.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 8.8
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 8.8
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 8.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 8.8
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 41.1 bits (92), Expect = 0.002
Identities = 34/110 (30%), Positives = 35/110 (31%)
Frame = -2
Query: 571 GGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXPXXXXGXFFPXXSXXXX 392
G APPP F P PPP S G PP G F P S
Sbjct: 346 GSFGAPPPQQFHAPSPQSFGGP----PPPVSSAPGNFAPPP--QSGPPGAFAPPPSAFGA 399
Query: 391 XXXXXXXXXXGXGPPXGGXXXXXXGXPPRGGGGXXGVXPPXXFFLGXPPP 242
G PP G G PP+GG G G PP PPP
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAPGSYG-PPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 37.1 bits (82), Expect = 0.025
Identities = 30/106 (28%), Positives = 31/106 (29%)
Frame = -2
Query: 559 APPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXPXXXXGXFFPXXSXXXXXXXX 380
AP P G P PPP G PP G P
Sbjct: 358 APSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGP--GGYGPPPPG 415
Query: 379 XXXXXXGXGPPXGGXXXXXXGXPPRGGGGXXGVXPPXXFFLGXPPP 242
GPP GG G PP GG G G P +G PPP
Sbjct: 416 GPGAPGSYGPPQGGPGGF--GPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = -2
Query: 583 PXXXGGVXAPPPXX--AXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXP 440
P GG PPP A G P PPPP P P G P
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFP 452
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.13
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 341 PXGGPXXPGGXXKPPPPXPPXGXTGKKXP 427
P P PGG PPPP PP G G P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 33.9 bits (74), Expect = 0.23
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 243 GGGXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXG 350
GG P GG P PPPP GG PP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.94
Identities = 26/84 (30%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = -2
Query: 487 PPXSGXGGXPXPPGXPXXXXGXFFPXXSXXXXXXXXXXXXXXGXG--PPXGGXXXXXXGX 314
PP +G G P PPG P G P G PP G
Sbjct: 707 PPITG--GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP-- 762
Query: 313 PPRGGGGXXGVXPPXXFFLGXPPP 242
PP GG PP F G PPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXP 448
PP P PGG PPP PP G P P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 805
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXP 440
P P GG PPP P PPPP GG P PP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGL--------PPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = +3
Query: 246 GGXPKKKXXGGXT-----PXXPPPPRGGXPXXXXXNPPXG 350
GG P GG P PPPP GG P PP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXG 406
PP G P GG PPPP PP G
Sbjct: 715 PPPGLPPITGG---PPPPPPPGG 734
Score = 29.1 bits (62), Expect = 6.6
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
P P GG PPP P PPPP GG P PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGG--------CPPPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 340 PPGGAXXPRGXXKTPPPXPPPGXXXEKXPP 429
PP G P PPP PP G PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 7/95 (7%)
Frame = -2
Query: 508 PXVXXPPPPXSGX----GGXPXPP---GXPXXXXGXFFPXXSXXXXXXXXXXXXXXGXGP 350
P + PPP G GG P PP G P G P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPP 763
Query: 349 PXGGXXXXXXGXPPRGGGGXXGVXPPXXFFLGXPP 245
P GG PP G G PP F P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.13
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 341 PXGGPXXPGGXXKPPPPXPPXGXTGKKXP 427
P P PGG PPPP PP G G P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 33.9 bits (74), Expect = 0.23
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 243 GGGXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXG 350
GG P GG P PPPP GG PP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.94
Identities = 26/84 (30%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = -2
Query: 487 PPXSGXGGXPXPPGXPXXXXGXFFPXXSXXXXXXXXXXXXXXGXG--PPXGGXXXXXXGX 314
PP +G G P PPG P G P G PP G
Sbjct: 707 PPITG--GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP-- 762
Query: 313 PPRGGGGXXGVXPPXXFFLGXPPP 242
PP GG PP F G PPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXP 448
PP P PGG PPP PP G P P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 805
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXP 440
P P GG PPP P PPPP GG P PP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGL--------PPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = +3
Query: 246 GGXPKKKXXGGXT-----PXXPPPPRGGXPXXXXXNPPXG 350
GG P GG P PPPP GG P PP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXG 406
PP G P GG PPPP PP G
Sbjct: 715 PPPGLPPITGG---PPPPPPPGG 734
Score = 29.1 bits (62), Expect = 6.6
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
P P GG PPP P PPPP GG P PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGG--------CPPPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 340 PPGGAXXPRGXXKTPPPXPPPGXXXEKXPP 429
PP G P PPP PP G PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 7/95 (7%)
Frame = -2
Query: 508 PXVXXPPPPXSGX----GGXPXPP---GXPXXXXGXFFPXXSXXXXXXXXXXXXXXGXGP 350
P + PPP G GG P PP G P G P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPP 763
Query: 349 PXGGXXXXXXGXPPRGGGGXXGVXPPXXFFLGXPP 245
P GG PP G G PP F P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.13
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 341 PXGGPXXPGGXXKPPPPXPPXGXTGKKXP 427
P P PGG PPPP PP G G P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 33.9 bits (74), Expect = 0.23
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 243 GGGXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXG 350
GG P GG P PPPP GG PP G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 31.9 bits (69), Expect = 0.94
Identities = 26/84 (30%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = -2
Query: 487 PPXSGXGGXPXPPGXPXXXXGXFFPXXSXXXXXXXXXXXXXXGXG--PPXGGXXXXXXGX 314
PP +G G P PPG P G P G PP G
Sbjct: 290 PPITG--GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP-- 345
Query: 313 PPRGGGGXXGVXPPXXFFLGXPPP 242
PP GG PP F G PPP
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXP 448
PP P PGG PPP PP G P P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 388
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXP 440
P P GG PPP P PPPP GG P PP P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGL--------PPISGGPPPPPPPPGGCPPPPPPP 358
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = +3
Query: 246 GGXPKKKXXGGXT-----PXXPPPPRGGXPXXXXXNPPXG 350
GG P GG P PPPP GG P PP G
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXG 406
PP G P GG PPPP PP G
Sbjct: 298 PPPGLPPITGG---PPPPPPPGG 317
Score = 29.1 bits (62), Expect = 6.6
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
P P GG PPP P PPPP GG P PP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGG--------CPPPPPPPPPGGFKGGPPPPP 371
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 340 PPGGAXXPRGXXKTPPPXPPPGXXXEKXPP 429
PP G P PPP PP G PP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 7/95 (7%)
Frame = -2
Query: 508 PXVXXPPPPXSGX----GGXPXPP---GXPXXXXGXFFPXXSXXXXXXXXXXXXXXGXGP 350
P + PPP G GG P PP G P G P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPP 346
Query: 349 PXGGXXXXXXGXPPRGGGGXXGVXPPXXFFLGXPP 245
P GG PP G G PP F P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 571 GGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
GG+ PPP + P PP P SG G P PP
Sbjct: 345 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 32.7 bits (71), Expect = 0.54
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPP----XSGXGGXPXPP 449
P G+ PPP G P + PPPP G GG P PP
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXP 448
PP G PGG PPPP P G P P
Sbjct: 336 PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 29.1 bits (62), Expect = 6.6
Identities = 27/104 (25%), Positives = 27/104 (25%), Gaps = 5/104 (4%)
Frame = +3
Query: 276 GXTPXXPPPPRGGXPXXXXXNPP---XGGPXXXXXXXXXXXXXXXXXXXGKKXPXXXXG- 443
G TP PPPP G PP G P G P G
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 341
Query: 444 -XPGGXGXPPXPEXGGGGXXTXGXXKXXXXXPXAXXGGGAXTPP 572
PGG PP P G P G G PP
Sbjct: 342 RYPGGMPPPPPPRYPSAGPGMY-PPPPPSRPPAPPSGHGMIPPP 384
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 571 GGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
GG+ PPP + P PP P SG G P PP
Sbjct: 355 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 32.7 bits (71), Expect = 0.54
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPP----XSGXGGXPXPP 449
P G+ PPP G P + PPPP G GG P PP
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXP 448
PP G PGG PPPP P G P P
Sbjct: 346 PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 29.1 bits (62), Expect = 6.6
Identities = 27/104 (25%), Positives = 27/104 (25%), Gaps = 5/104 (4%)
Frame = +3
Query: 276 GXTPXXPPPPRGGXPXXXXXNPP---XGGPXXXXXXXXXXXXXXXXXXXGKKXPXXXXG- 443
G TP PPPP G PP G P G P G
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 351
Query: 444 -XPGGXGXPPXPEXGGGGXXTXGXXKXXXXXPXAXXGGGAXTPP 572
PGG PP P G P G G PP
Sbjct: 352 RYPGGMPPPPPPRYPSAGPGMY-PPPPPSRPPAPPSGHGMIPPP 394
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.23
Identities = 26/113 (23%), Positives = 33/113 (29%), Gaps = 2/113 (1%)
Frame = +3
Query: 240 KGGGXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXGGPXXXXXXXXXXXXXXXXXXXGK 419
+ G K++ +P PPPP+G P +PP P G
Sbjct: 222 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPPPPTGS 279
Query: 420 KXPXXXXG--XPGGXGXPPXPEXGGGGXXTXGXXKXXXXXPXAXXGGGAXTPP 572
P G P G PP P G T G G+ PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 32.7 bits (71), Expect = 0.54
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXG--XTGKKXPXXXXXXP 448
PP GG P PPPP PP G TG P P
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
P P G PPP P PPP +G G P PP
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP-AGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.23
Identities = 26/113 (23%), Positives = 33/113 (29%), Gaps = 2/113 (1%)
Frame = +3
Query: 240 KGGGXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXGGPXXXXXXXXXXXXXXXXXXXGK 419
+ G K++ +P PPPP+G P +PP P G
Sbjct: 243 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPPPPTGS 300
Query: 420 KXPXXXXG--XPGGXGXPPXPEXGGGGXXTXGXXKXXXXXPXAXXGGGAXTPP 572
P G P G PP P G T G G+ PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 32.7 bits (71), Expect = 0.54
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXG--XTGKKXPXXXXXXP 448
PP GG P PPPP PP G TG P P
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
P P G PPP P PPP +G G P PP
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP-AGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.23
Identities = 26/113 (23%), Positives = 33/113 (29%), Gaps = 2/113 (1%)
Frame = +3
Query: 240 KGGGXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXGGPXXXXXXXXXXXXXXXXXXXGK 419
+ G K++ +P PPPP+G P +PP P G
Sbjct: 228 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPPPPTGS 285
Query: 420 KXPXXXXG--XPGGXGXPPXPEXGGGGXXTXGXXKXXXXXPXAXXGGGAXTPP 572
P G P G PP P G T G G+ PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 32.7 bits (71), Expect = 0.54
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXG--XTGKKXPXXXXXXP 448
PP GG P PPPP PP G TG P P
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
P P G PPP P PPP +G G P PP
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP-AGTGSPPPPP 339
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 33.1 bits (72), Expect = 0.41
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = -3
Query: 582 PXXGGXXXPPPPXGPXGXXAPVXXAPXXXXXXXXXXXXXXXPXPXGXXFXXXGXFFPVXP 403
P G PP P GP G P A G G P P
Sbjct: 173 PGDAGKDGPPGPPGPDGDSGPNGEAGPNGEPGAPGKDGEKGKGEPGPA-GPPGPPGPGGP 231
Query: 402 XGGXGGGGFXXPPGXXGPP 346
G GG G PG GPP
Sbjct: 232 PGDAGGAGSDGAPGPQGPP 250
Score = 29.1 bits (62), Expect = 6.6
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 347 GGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXPXGXXXXXXXXXXXXXXXXXGAXKTGA 526
G P PG K PP PP G G P P G A G
Sbjct: 168 GQPGAPGDAGKDGPPGPP-GPDGDSGP-NGEAGPNGEPGAPGKDGEKGKGEPGPAGPPGP 225
Query: 527 XXPXGPXGGGG 559
P GP G G
Sbjct: 226 PGPGGPPGDAG 236
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.54
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 559 APPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXP 440
APPP G P PPP GG P PP P
Sbjct: 519 APPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLP 558
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 32.7 bits (71), Expect = 0.54
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +2
Query: 347 GGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXPXGXXXXXXXXXXXXXXXXXGAXKTGA 526
G P PGG +P PP P G G+ P G G + G
Sbjct: 203 GPPGPPGGVGEPGPPG-PAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGG 261
Query: 527 XXPXGPXGGGG 559
P G GG G
Sbjct: 262 QGPPGDAGGPG 272
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -3
Query: 585 PPXXGGXXXPPPPXGPXGXXAPVXXAPXXXXXXXXXXXXXXXPXPXGXXFXXXGXFFPVX 406
PP G PP P G G V A P G P
Sbjct: 207 PPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGGQGPPG 266
Query: 405 PXGGXGGGGFXXPPGXXGP 349
GG G G PPG GP
Sbjct: 267 DAGGPGPVGGQGPPGPQGP 285
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 32.7 bits (71), Expect = 0.54
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +2
Query: 347 GGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXPXGXXXXXXXXXXXXXXXXXGAXKTGA 526
G P PGG +P PP P G G+ P G G + G
Sbjct: 203 GPPGPPGGVGEPGPPG-PAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGG 261
Query: 527 XXPXGPXGGGG 559
P G GG G
Sbjct: 262 QGPPGDAGGPG 272
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -3
Query: 585 PPXXGGXXXPPPPXGPXGXXAPVXXAPXXXXXXXXXXXXXXXPXPXGXXFXXXGXFFPVX 406
PP G PP P G G V A P G P
Sbjct: 207 PPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGGQGPPG 266
Query: 405 PXGGXGGGGFXXPPGXXGP 349
GG G G PPG GP
Sbjct: 267 DAGGPGPVGGQGPPGPQGP 285
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.71
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAX-GXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
P GG+ PPP F P PPPP SG G P PP
Sbjct: 88 PMFAGGIPPPPPMMGGIPPPPPMFGAPP---PPPPPSGLGVAPQPP 130
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP 449
P GG+ PPP A G P + PPP G P PP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPP---PPPMMGGIPPPPPMFGAPPPPP 118
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 32.3 bits (70), Expect = 0.71
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTG 415
PP G P G PPPP PP G G
Sbjct: 637 PPMGLPAVGAGAPPPPPPPPPSGAGG 662
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = -2
Query: 556 PPPXXAXGXXXXXFXXPXVXXPPPPXS----GXGGXPXPPGXPXXXXG 425
PPP + G P PPPP G G P PP P G
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 32.3 bits (70), Expect = 0.71
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTG 415
PP G P G PPPP PP G G
Sbjct: 463 PPMGLPAVGAGAPPPPPPPPPSGAGG 488
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = -2
Query: 556 PPPXXAXGXXXXXFXXPXVXXPPPPXS----GXGGXPXPPGXPXXXXG 425
PPP + G P PPPP G G P PP P G
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.94
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPP-PPXP---PXGXTGKKXP-XXXXXXPXGXXXXXXXXXXXXXXXX 502
P GGP P G PP PP P P G P P G
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGE 208
Query: 503 XGAXKTGAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
GA + G GP G G P G G
Sbjct: 209 PGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.9 bits (69), Expect = 0.94
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPP-PPXP---PXGXTGKKXP-XXXXXXPXGXXXXXXXXXXXXXXXX 502
P GGP P G PP PP P P G P P G
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGE 208
Query: 503 XGAXKTGAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
GA + G GP G G P G G
Sbjct: 209 PGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.9 bits (69), Expect = 0.94
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPP-PPXP---PXGXTGKKXP-XXXXXXPXGXXXXXXXXXXXXXXXX 502
P GGP P G PP PP P P G P P G
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGE 208
Query: 503 XGAXKTGAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
GA + G GP G G P G G
Sbjct: 209 PGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.94
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPP-PPXP---PXGXTGKKXP-XXXXXXPXGXXXXXXXXXXXXXXXX 502
P GGP P G PP PP P P G P P G
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGE 208
Query: 503 XGAXKTGAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
GA + G GP G G P G G
Sbjct: 209 PGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.9 bits (69), Expect = 0.94
Identities = 25/89 (28%), Positives = 27/89 (30%), Gaps = 7/89 (7%)
Frame = +3
Query: 249 GXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXGGPXXXXXXXXXXXXXXXXXXXGKKXP 428
G P K GG + PP P G P GG G+ P
Sbjct: 242 GRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGG--YGVGPPGPPGPSGRPGAPGQPGP 299
Query: 429 XXXXGXPGGXGXP-------PXPEXGGGG 494
G PG G P P P GGGG
Sbjct: 300 DGQPGAPGNDGTPGTDAAYCPCPGRGGGG 328
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 246 GGXPKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXGGP 356
GG P + PPP RGG P P GGP
Sbjct: 1466 GGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGP 1502
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 352 PPXGGXXXXXXGXPPRGGGGXXGVXPPXXFFLGXPPP 242
PP GG G PP GG PP +G PPP
Sbjct: 1561 PPHGGMNGWRGGPPPPRGGSHCQGPPP---LMGGPPP 1594
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 1.2
Identities = 32/110 (29%), Positives = 33/110 (30%), Gaps = 3/110 (2%)
Frame = -2
Query: 559 APPPXXAXGXXXXXFXXPXVXXPPPPX-SGXGGXPXPPGXPXXXXGXFFPXXSXXXXXXX 383
APPP G P V PPP G P P P G F +
Sbjct: 706 APPPPGIPGYPPAP-PPPGVGPPPPQGIPPMGFDPNKPPPPMFQQG--FNAGAPPPPFGR 762
Query: 382 XXXXXXXGXGPPXGGXXXXXXGXPPRGGGGXXGVXPPXXFFL--GXPPPF 239
PP GG RGG G G PP F G PPF
Sbjct: 763 GAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPPF 812
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 26.6 bits (56), Expect(2) = 1.3
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 603 PXXXXXPPXXGGXXXPPPPXGPXGXXAP 520
P PP G PP P GP G P
Sbjct: 223 PPGPPGPPGAPGNDGPPGPPGPKGAPGP 250
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 414 PVXPXGGXGGGGFXXPPGXXGPP 346
P P G G G PPG G P
Sbjct: 250 PDGPPGADGQSGPPGPPGPAGTP 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 26.6 bits (56), Expect(2) = 1.3
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 603 PXXXXXPPXXGGXXXPPPPXGPXGXXAP 520
P PP G PP P GP G P
Sbjct: 223 PPGPPGPPGAPGNDGPPGPPGPKGAPGP 250
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 414 PVXPXGGXGGGGFXXPPGXXGPP 346
P P G G G PPG G P
Sbjct: 250 PDGPPGADGQSGPPGPPGPAGTP 272
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXP 448
PP GGP P PPP P G G P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVP 818
Score = 25.0 bits (52), Expect(2) = 9.2
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 606 SPXXXXXPPXXGGXXXPPPPXGPXGXXAPVXXAP 505
SP P GG P PP G G P P
Sbjct: 764 SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 21.8 bits (44), Expect(2) = 9.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 405 PXGGXGGGGFXXPP 364
P G GGGG PP
Sbjct: 798 PPGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXP 448
PP GGP P PPP P G G P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVP 818
Score = 25.0 bits (52), Expect(2) = 9.2
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 606 SPXXXXXPPXXGGXXXPPPPXGPXGXXAPVXXAP 505
SP P GG P PP G G P P
Sbjct: 764 SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 21.8 bits (44), Expect(2) = 9.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 405 PXGGXGGGGFXXPP 364
P G GGGG PP
Sbjct: 798 PPGAPGGGGGMYPP 811
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP-GXPXXXXG 425
P G PPP PPPP G G P PP G P G
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSG 150
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXP 440
P G +PPP PPPP G G P P G P
Sbjct: 252 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPTGEP 299
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP-GXP 440
P G +PPP PPPP G G P PP G P
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 176
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP-GXP 440
P G +PPP PPPP G G P PP G P
Sbjct: 159 PPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEP 207
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = -2
Query: 583 PXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPP-GXP 440
P G PPP PPPP G G P PP G P
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEP 82
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 26.6 bits (56), Expect(2) = 2.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 603 PXXXXXPPXXGGXXXPPPPXGPXGXXAP 520
P PP G PP P GP G P
Sbjct: 230 PAGPPGPPGAPGNDGPPGPPGPKGSPGP 257
Score = 25.8 bits (54), Expect(2) = 4.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 341 PXGGPXXPGGXXKPPPPXPPXGXTGKKXP 427
P G P PG PP PP G G P
Sbjct: 230 PAGPPGPPGAPGNDGPPGPP-GPKGSPGP 257
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 521 GAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
G+ P GP G G PP G G
Sbjct: 253 GSPGPDGPAGVDGQAGPPGPPGQAGTPG 280
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 414 PVXPXGGXGGGGFXXPPGXXGPP 346
P P G G G PPG G P
Sbjct: 257 PDGPAGVDGQAGPPGPPGQAGTP 279
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 26.6 bits (56), Expect(2) = 2.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 603 PXXXXXPPXXGGXXXPPPPXGPXGXXAP 520
P PP G PP P GP G P
Sbjct: 230 PAGPPGPPGAPGNDGPPGPPGPKGSPGP 257
Score = 25.8 bits (54), Expect(2) = 4.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 341 PXGGPXXPGGXXKPPPPXPPXGXTGKKXP 427
P G P PG PP PP G G P
Sbjct: 230 PAGPPGPPGAPGNDGPPGPP-GPKGSPGP 257
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 521 GAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
G+ P GP G G PP G G
Sbjct: 253 GSPGPDGPAGVDGQAGPPGPPGQAGTPG 280
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 414 PVXPXGGXGGGGFXXPPGXXGPP 346
P P G G G PPG G P
Sbjct: 257 PDGPAGVDGQAGPPGPPGQAGTP 279
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 26.6 bits (56), Expect(2) = 2.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 603 PXXXXXPPXXGGXXXPPPPXGPXGXXAP 520
P PP G PP P GP G P
Sbjct: 228 PPGPPGPPGAPGNDGPPGPPGPKGAPGP 255
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 414 PVXPXGGXGGGGFXXPPGXXGPP 346
P P G G G PPG G P
Sbjct: 255 PDGPPGVDGQSGPPGPPGPAGTP 277
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 25.0 bits (52), Expect(2) = 2.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 521 GAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
G GP G GG PP GG G
Sbjct: 165 GGHGEPGPAGRGGPRGPPGPGGPQGEAG 192
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 350 GPXXPGGXXKPPPPXPPXGXTGKKXP 427
GP P G P P P G G+ P
Sbjct: 147 GPAGPAGGPGPKGPPGPPGGHGEPGP 172
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXP 427
PP GGP P PPP P G G P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 25.0 bits (52), Expect(2) = 4.3
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 606 SPXXXXXPPXXGGXXXPPPPXGPXGXXAPVXXAP 505
SP P GG P PP G G P P
Sbjct: 764 SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 23.0 bits (47), Expect(2) = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 6/26 (23%)
Frame = -3
Query: 405 PXGGXGGGGFXXP------PGXXGPP 346
P G GGGG P PG GPP
Sbjct: 798 PPGAPGGGGGMYPPLIPTRPGPGGPP 823
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 2.9
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +2
Query: 347 GGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXPXGXXXXXXXXXXXXXXXXXGAXKTGA 526
GGP PGG PP G ++ P P G G
Sbjct: 125 GGPGGPGGP-------PPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGH 177
Query: 527 XXPXGPXGGGGXXXPPXXGG 586
GP G GG PP GG
Sbjct: 178 GGMGGPPGHGGQGGPPGHGG 197
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 2.9
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +2
Query: 347 GGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXPXGXXXXXXXXXXXXXXXXXGAXKTGA 526
GGP PGG PP G ++ P P G G
Sbjct: 405 GGPGGPGGP-------PPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGH 457
Query: 527 XXPXGPXGGGGXXXPPXXGG 586
GP G GG PP GG
Sbjct: 458 GGMGGPPGHGGQGGPPGHGG 477
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTGKKXP 427
PP GGP P PPP P G G P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 25.0 bits (52), Expect(2) = 4.3
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 606 SPXXXXXPPXXGGXXXPPPPXGPXGXXAPVXXAP 505
SP P GG P PP G G P P
Sbjct: 764 SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 23.0 bits (47), Expect(2) = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 6/26 (23%)
Frame = -3
Query: 405 PXGGXGGGGFXXP------PGXXGPP 346
P G GGGG P PG GPP
Sbjct: 798 PPGAPGGGGGMYPPLIPTRPGPGGPP 823
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 3.8
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = +3
Query: 276 GXTPXXPPPPRGGXPXXXXXNPPXGGPXXXXXXXXXXXXXXXXXXXGKKXPXXXXGXPGG 455
G TP P P NP GG G+ P G PG
Sbjct: 112 GGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPG---GRPGPPGPPGRPGS 168
Query: 456 XGXPPXPEXGGGGXXTXG 509
G P P GGG G
Sbjct: 169 DGQPGRPATGGGAAPRPG 186
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 405 PXGGXGGGGFXXPPGXXGPP 346
P GG GGGG+ P G PP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPP 99
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 255 PKKKXXGGXTPXXPPPPRGGXPXXXXXNPPXGGP 356
P+K GG +P PPPPR PP P
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPP 161
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 29.5 bits (63), Expect = 5.0
Identities = 28/110 (25%), Positives = 29/110 (26%), Gaps = 1/110 (0%)
Frame = -2
Query: 601 PXXXXXPXXXGGVXAPPPXXAXGXXXXXFXXPXVXXPPPPXSGXGGXPXPPGXPXXXXGX 422
P P G P G P P PP G G P PPG P
Sbjct: 204 PGPKGPPGQPGADGQPGMPGEPGKDAPQEGSPVPGDPGPP--GDSGIPGPPGPPGMAGPD 261
Query: 421 FFPXXSXXXXXXXXXXXXXXGXGPPXGGXXXXXXGXPPRGGG-GXXGVXP 275
P GPP G P GGG G G+ P
Sbjct: 262 GIPGMG-------GAKGQNGPDGPPGASGESGPNGPPGSGGGAGEKGICP 304
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 441 GXPGGXGXPPXPEXGGGGXXTXG 509
G PGG G PP GGGG G
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTG 641
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 434 PXGGFFSXXXPGGGXGGGVFXXPRGXXAPP 345
P GG PGGG GGG P G APP
Sbjct: 621 PGGGGGPPRGPGGGGGGG----PTGPPAPP 646
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 582 PXXGGXXXPPPPXGPXGXXAP 520
P GG PPPP GP G P
Sbjct: 42 PCGGGFGPPPPPFGPVGYALP 62
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 441 GXPGGXGXPPXPEXGGGGXXTXG 509
G PGG G PP GGGG G
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTG 641
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 434 PXGGFFSXXXPGGGXGGGVFXXPRGXXAPP 345
P GG PGGG GGG P G APP
Sbjct: 621 PGGGGGPPRGPGGGGGGG----PTGPPAPP 646
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPP 400
PP P GG PPPP PP
Sbjct: 40 PPPPPPPCGGGYEAPPPPPPP 60
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTG 415
P G P P G PPPP PP G
Sbjct: 51 PAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTG 415
P G P P G PPPP PP G
Sbjct: 51 PAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTG 415
P G P P G PPPP PP G
Sbjct: 51 PAAGYPRPPIGYGAPPPPPPPPAFGG 76
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 6.6
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +3
Query: 414 GKKXPXXXXGXPGGXGXPPXPEXGGGGXXTXGXXKXXXXXPXAXXGGGAXTPPXXXGXXX 593
G P G PGG G P P GG P A GGG P G
Sbjct: 278 GPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTP-AGGGGGGDFPAGGGGGGY 336
Query: 594 XXG 602
G
Sbjct: 337 STG 339
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/93 (27%), Positives = 26/93 (27%), Gaps = 5/93 (5%)
Frame = +2
Query: 341 PXGGPXXPG---GXXKPPPPXPPXGXTGKKXPXXXXXXPXGXXXXXXXXXXXXXXXXXGA 511
P G P PG PPPP PP G G P G G
Sbjct: 194 PAGAPGVPGPDGDAGSPPPPGPP-GPPGPPGNDGQPGAP-GQDGQPGAPGTNTVNSPGGP 251
Query: 512 XKTGAXXPXGPXG--GGGXXXPPXXGGXXXXXG 604
G P GP G G G P G G
Sbjct: 252 GPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPG 284
Score = 28.7 bits (61), Expect = 8.8
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 8/87 (9%)
Frame = -3
Query: 582 PXXGGXXXPPPPXGPXGXXAPVXXAPXXXXXXXXXXXXXXXPXPXGXXFXXXGXFFPVXP 403
P G PPP GP G P P P G P P
Sbjct: 201 PGPDGDAGSPPPPGPPGPPGP----PGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGP 256
Query: 402 XG--------GXGGGGFXXPPGXXGPP 346
G G GG PPG GPP
Sbjct: 257 PGPPGPPGQDGSGGAAQPGPPGPPGPP 283
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 24.6 bits (51), Expect(2) = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 341 PXGGPXXPGGXXKPPPPXPPXG 406
P G P GG PP PP G
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGG 161
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +2
Query: 506 GAXKTGAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
G + G P GP G G P GG G
Sbjct: 167 GPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAG 199
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 24.6 bits (51), Expect(2) = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 341 PXGGPXXPGGXXKPPPPXPPXG 406
P G P GG PP PP G
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGG 161
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +2
Query: 506 GAXKTGAXXPXGPXGGGGXXXPPXXGGXXXXXG 604
G + G P GP G G P GG G
Sbjct: 167 GPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAG 199
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -2
Query: 493 PPPPXSGXG--GXPXPPGXPXXXXGXFFP 413
PPPP G G P PPG P G + P
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPP 708
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -2
Query: 493 PPPPXSGXG--GXPXPPGXPXXXXGXFFP 413
PPPP G G P PPG P G + P
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPP 708
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 125 KKXXKKKKXKNKKKXXAXNXKKKKXNXHXWXSRIP 21
KK KK K K+KKK + KKKK + S P
Sbjct: 258 KKKNKKSKSKDKKKTASKKNKKKKKSKGESASSTP 292
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 8.8
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +2
Query: 347 GGPXXPGGXXKPPPPXPPXGXTGKKXPXXXXXXPXGXXXXXXXXXXXXXXXXXG-AXKTG 523
G P PGG P PP PP G + P P G A G
Sbjct: 207 GAPGTPGGNALPGPPGPP----GPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPG 262
Query: 524 AXXPXGPXGGGG 559
P GP G G
Sbjct: 263 PPGPIGPPGQPG 274
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 338 PPXGGPXXPGGXXKPPPPXPPXGXTG 415
PP P P PPPP PP G G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGGLMG 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,301,436
Number of Sequences: 27780
Number of extensions: 245793
Number of successful extensions: 5129
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3862
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3349461018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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