Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C21
(1185 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A his... 155 2e-36
UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone... 155 2e-36
UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Hist... 155 2e-36
UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4... 155 2e-36
UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella ve... 155 2e-36
UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone... 154 5e-36
UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep... 144 3e-33
UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1... 132 2e-29
UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4... 130 5e-29
UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana... 101 4e-20
UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histo... 100 8e-20
UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania braziliensi... 100 1e-19
UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep... 100 1e-19
UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 88 5e-16
UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep: H... 85 3e-15
UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Re... 83 2e-14
UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep: H... 81 6e-14
UniRef50_Q0UHL1 Cluster: Histone H4; n=1; Phaeosphaeria nodorum|... 81 6e-14
UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago... 73 1e-11
UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA bindin... 70 1e-10
UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon cunicu... 69 2e-10
UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania braziliensi... 66 2e-09
UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 66 2e-09
UniRef50_Q4RFZ6 Cluster: Chromosome undetermined SCAF15108, whol... 64 9e-09
UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania braziliensi... 62 3e-08
UniRef50_A4VCP0 Cluster: Putative uncharacterized protein; n=1; ... 58 6e-07
UniRef50_Q0J1K7 Cluster: Os09g0433500 protein; n=10; Eukaryota|R... 57 8e-07
UniRef50_A2RAE9 Cluster: Histone H4; n=1; Aspergillus niger|Rep:... 57 1e-06
UniRef50_A6QZ47 Cluster: Predicted protein; n=1; Ajellomyces cap... 56 2e-06
UniRef50_Q3LW75 Cluster: Histone H4; n=1; Bigelowiella natans|Re... 50 1e-04
UniRef50_Q5BH63 Cluster: Survival factor 1; n=18; Pezizomycotina... 49 2e-04
UniRef50_Q9HGK9 Cluster: Histone H4 variant; n=2; Schizosaccharo... 49 3e-04
UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa... 48 4e-04
UniRef50_Q0V9Y3 Cluster: Putative uncharacterized protein MGC145... 48 5e-04
UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides im... 44 0.010
UniRef50_Q8JKV9 Cluster: Histone h3, h4; n=2; root|Rep: Histone ... 43 0.018
UniRef50_UPI00005480BE Cluster: PREDICTED: hypothetical protein;... 40 0.17
UniRef50_A7F6E9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.38
UniRef50_Q6CGH9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 38 0.67
UniRef50_A6SS64 Cluster: Putative uncharacterized protein; n=1; ... 38 0.67
UniRef50_Q4JH29 Cluster: Histone; n=1; Cenarchaeum symbiosum|Rep... 37 1.2
UniRef50_A7DPB5 Cluster: Transcription factor CBF/NF-Y/archaeal ... 37 1.2
UniRef50_A1RX27 Cluster: Transcription factor CBF/NF-Y histone; ... 36 1.5
UniRef50_Q2H4H2 Cluster: Putative uncharacterized protein; n=1; ... 36 2.7
UniRef50_Q0UBC0 Cluster: Putative uncharacterized protein; n=1; ... 35 3.6
UniRef50_Q58655 Cluster: Probable archaeal histone 3; n=2; Archa... 35 3.6
UniRef50_A6QUY0 Cluster: Predicted protein; n=1; Ajellomyces cap... 35 4.7
UniRef50_P48782 Cluster: Archaeal histone A1; n=21; Euryarchaeot... 35 4.7
UniRef50_Q74MT3 Cluster: NEQ288; n=1; Nanoarchaeum equitans|Rep:... 34 8.3
>UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA; n=2; Takifugu
rubripes|Rep: Homolog of Homo sapiens "H2A histone
family, member X (H2AFX), mRNA - Takifugu rubripes
Length = 325
Score = 155 bits (377), Expect = 2e-36
Identities = 77/83 (92%), Positives = 77/83 (92%)
Frame = +1
Query: 124 AXRHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTE 303
A RHRKVL DN QG TKPAIR LARRGGVKRISGLIYEETR VLKVFLENVIRDAVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTE 75
Query: 304 HAKRKTVTAMDVVYALKRQGRTL 372
HAKRKTVTAMDVVYALKRQGRTL
Sbjct: 76 HAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone 1,
H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "Histone 1, H2ai - Takifugu rubripes
Length = 370
Score = 155 bits (377), Expect = 2e-36
Identities = 77/83 (92%), Positives = 77/83 (92%)
Frame = +1
Query: 124 AXRHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTE 303
A RHRKVL DN QG TKPAIR LARRGGVKRISGLIYEETR VLKVFLENVIRDAVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTE 75
Query: 304 HAKRKTVTAMDVVYALKRQGRTL 372
HAKRKTVTAMDVVYALKRQGRTL
Sbjct: 76 HAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Histone
H4 - Tetraodon nigroviridis (Green puffer)
Length = 234
Score = 155 bits (377), Expect = 2e-36
Identities = 77/83 (92%), Positives = 77/83 (92%)
Frame = +1
Query: 124 AXRHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTE 303
A RHRKVL DN QG TKPAIR LARRGGVKRISGLIYEETR VLKVFLENVIRDAVTYTE
Sbjct: 147 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTE 206
Query: 304 HAKRKTVTAMDVVYALKRQGRTL 372
HAKRKTVTAMDVVYALKRQGRTL
Sbjct: 207 HAKRKTVTAMDVVYALKRQGRTL 229
>UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4 -
Homo sapiens (Human)
Length = 103
Score = 155 bits (377), Expect = 2e-36
Identities = 77/83 (92%), Positives = 77/83 (92%)
Frame = +1
Query: 124 AXRHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTE 303
A RHRKVL DN QG TKPAIR LARRGGVKRISGLIYEETR VLKVFLENVIRDAVTYTE
Sbjct: 16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTE 75
Query: 304 HAKRKTVTAMDVVYALKRQGRTL 372
HAKRKTVTAMDVVYALKRQGRTL
Sbjct: 76 HAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 222
Score = 155 bits (376), Expect = 2e-36
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = +1
Query: 124 AXRHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTE 303
A RHRK+L DN QG TKPAIR LARRGGVKRISGLIYEETR VLKVFLENVIRDAVTYTE
Sbjct: 16 AKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTE 75
Query: 304 HAKRKTVTAMDVVYALKRQGRTL 372
HAKRKTVTAMDVVYALKRQGRTL
Sbjct: 76 HAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone H4
- Oryza sativa subsp. japonica (Rice)
Length = 285
Score = 154 bits (373), Expect = 5e-36
Identities = 75/83 (90%), Positives = 77/83 (92%)
Frame = +1
Query: 124 AXRHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTE 303
A RHRKVL DN QG TKPAIR LARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTE
Sbjct: 198 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTE 257
Query: 304 HAKRKTVTAMDVVYALKRQGRTL 372
HA+RKTVTAMDVVYALKRQGRTL
Sbjct: 258 HARRKTVTAMDVVYALKRQGRTL 280
>UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep:
Histone H4 - Ostreococcus tauri
Length = 282
Score = 144 bits (350), Expect = 3e-33
Identities = 71/78 (91%), Positives = 73/78 (93%)
Frame = +1
Query: 139 KVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRK 318
+VL DN QG TKPAIR LARRGGVKRISGLIYEETR VLKVFLENVIRDAVTYTEHA+RK
Sbjct: 170 RVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRK 229
Query: 319 TVTAMDVVYALKRQGRTL 372
TVTAMDVVYALKRQGRTL
Sbjct: 230 TVTAMDVVYALKRQGRTL 247
Score = 67.7 bits (158), Expect = 5e-10
Identities = 36/105 (34%), Positives = 58/105 (55%)
Frame = -1
Query: 384 AETVQRSPLPLQSVDHVHGCYGFPFSVLCVSNRVPDNVLEKNL*NAACFLVNQAGYTFDA 205
AE V+ + L L+ VD +HG SVL V + + D+VLE++L +A+ V++ D
Sbjct: 19 AEAVEGAALALERVDDIHGGDRLSASVLGVGHGITDDVLEEHLEDASGLFVDETRDALDT 78
Query: 204 AASRQXSNGRLRXSLXIIXENFPVPXRASLPQAFPAFTATRHCCV 70
+ Q S+ RLR +L ++ ++ V A+L + FT RHC V
Sbjct: 79 TTASQASDRRLRDALNVVAKDLAVTLGAALSETLTTFTTARHCLV 123
>UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1;
Takifugu rubripes|Rep: H4 histone family, member L -
Takifugu rubripes
Length = 220
Score = 132 bits (318), Expect = 2e-29
Identities = 69/80 (86%), Positives = 69/80 (86%)
Frame = +1
Query: 133 HRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAK 312
HRKVL DN QG T ARRGGVKRISGLIYEETR VLKVFLENVIRDAVTYTEHAK
Sbjct: 143 HRKVLRDNIQGIT-------ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAK 195
Query: 313 RKTVTAMDVVYALKRQGRTL 372
RKTVTAMDVVYALKRQGRTL
Sbjct: 196 RKTVTAMDVVYALKRQGRTL 215
>UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4 -
Euplotes crassus
Length = 107
Score = 130 bits (315), Expect = 5e-29
Identities = 65/84 (77%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
Frame = +1
Query: 124 AXRH-RKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYT 300
A RH +K L + G TKPAIR LARRGGVKRIS L+YEETR+VLK FLE+VIRD+VTYT
Sbjct: 19 AKRHAKKALRETILGVTKPAIRRLARRGGVKRISSLVYEETRAVLKGFLESVIRDSVTYT 78
Query: 301 EHAKRKTVTAMDVVYALKRQGRTL 372
EHAKRKTVTA+DVVYALKRQG+TL
Sbjct: 79 EHAKRKTVTALDVVYALKRQGKTL 102
>UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana
B05.10|Rep: Histone H4 - Botryotinia fuckeliana B05.10
Length = 138
Score = 101 bits (242), Expect = 4e-20
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 309
RHRKVL DN G TK IR LARRGGVKRIS +IY + R +K L +V++D V EH+
Sbjct: 50 RHRKVLKDNINGITKGDIRRLARRGGVKRISSMIYGDVREAIKSRLNDVLKDCVALVEHS 109
Query: 310 KRKTVTAMDVVYALKRQGRTL 372
KRKTVT DV++AL+RQGR +
Sbjct: 110 KRKTVTVNDVIWALRRQGRPI 130
>UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histone
h4 - Leishmania major
Length = 100
Score = 100 bits (239), Expect = 8e-20
Identities = 45/81 (55%), Positives = 63/81 (77%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 309
R +KVL DN +G T+ ++R +ARRGGVKRIS +YEE R VLK ++E+++R + YTE+A
Sbjct: 16 RQKKVLRDNIRGITRGSVRRMARRGGVKRISSEVYEEVRRVLKAYVEDIVRCSTAYTEYA 75
Query: 310 KRKTVTAMDVVYALKRQGRTL 372
++KTVTA DVV AL++QG L
Sbjct: 76 RKKTVTACDVVNALRKQGHIL 96
>UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 145
Score = 99.5 bits (237), Expect = 1e-19
Identities = 45/81 (55%), Positives = 62/81 (76%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 309
R +KVL DN G T+ +R +ARRGGVKRISG +YEE R VLK ++E+++R + YTE+A
Sbjct: 61 RQKKVLRDNIHGITRGCVRRMARRGGVKRISGDLYEEVRRVLKAYVEDIVRCSTAYTEYA 120
Query: 310 KRKTVTAMDVVYALKRQGRTL 372
++KTVTA DVV AL+++G L
Sbjct: 121 RKKTVTAADVVNALRKRGHIL 141
>UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep:
Histone H4 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 144
Score = 99.5 bits (237), Expect = 1e-19
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 309
RHRK+ D G TK IR LARRGGVKR+SG+IY+ETR +K +LE ++RD V Y ++
Sbjct: 46 RHRKIQRDTISGITKGDIRRLARRGGVKRLSGMIYDETRGAMKQYLERILRDCVAYCDYR 105
Query: 310 KRKTVTAMDVVYALKRQGRTL 372
+ KTVT DV++ALKR GR +
Sbjct: 106 RAKTVTVHDVLHALKRIGRPI 126
>UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 107
Score = 87.8 bits (208), Expect = 5e-16
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +1
Query: 124 AXRHRKVLXDNXQGX---TKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVT 294
A RH+ + +G T IR LARRGGVKRIS Y TR V+ FL ++++DA+
Sbjct: 17 AKRHKNKMNKEKKGGQHITNGDIRRLARRGGVKRISSDSYPTTRDVIVNFLSSLVKDAII 76
Query: 295 YTEHAKRKTVTAMDVVYALKRQGRTL 372
YTEHA+R TV AMDVVYALK+ GR L
Sbjct: 77 YTEHAQRNTVQAMDVVYALKKYGRNL 102
>UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep:
Histone H4 - Euplotes vannus
Length = 125
Score = 85.0 bits (201), Expect = 3e-15
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +1
Query: 163 GXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVV 342
G + A++ LARRGG+KRIS +YEE R + VFLE ++ D+ +Y + AKRKT+ +DVV
Sbjct: 33 GISDGAMKRLARRGGIKRISADVYEELRKIYIVFLEKLVEDSYSYADCAKRKTIIPLDVV 92
Query: 343 YALKRQGRTL 372
YALKRQGR L
Sbjct: 93 YALKRQGRNL 102
>UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Rep:
Histone H4 - Heterodera glycines (Soybean cyst nematode
worm)
Length = 170
Score = 82.6 bits (195), Expect = 2e-14
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 309
R R +L D+ + TK +I LARR GV RI+ +Y+E R+ L+ +LE +IRDA Y +H
Sbjct: 16 RTRVLLRDSAKKITKASILRLARRAGVARINARVYDEVRAALRSYLETIIRDAAIYCQHE 75
Query: 310 KRKTVTAMDVVYALKRQGRTL 372
+RKT+ + DVV+AL+RQG +
Sbjct: 76 RRKTMKSRDVVHALRRQGNLM 96
>UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep:
Histone H4 - Neurospora crassa
Length = 155
Score = 81.0 bits (191), Expect = 6e-14
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 309
RHRK++ D +G T RRGGVKRIS IY+E R+ LK L+ ++RD VTYTEH
Sbjct: 43 RHRKIIKDTIRGIT--------RRGGVKRISAGIYDEIRAALKERLQMILRDCVTYTEHR 94
Query: 310 KRKTVTAMDVVYALKRQGRTL 372
KTVT DV++AL+R G+ +
Sbjct: 95 HAKTVTVTDVIFALRRIGKPI 115
>UniRef50_Q0UHL1 Cluster: Histone H4; n=1; Phaeosphaeria
nodorum|Rep: Histone H4 - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 238
Score = 81.0 bits (191), Expect = 6e-14
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 309
RH K+ D G TK IR LARRGGVKRI+ IY++ R L L ++++DA+ E +
Sbjct: 147 RHMKIQRDTIYGVTKGDIRRLARRGGVKRIAATIYDDIRQALNDRLRSILKDAIAVVECS 206
Query: 310 KRKTVTAMDVVYALKRQGRTL 372
RKT++ D+++ L RQGR L
Sbjct: 207 GRKTISVTDIIFVLNRQGRQL 227
>UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago
truncatula|Rep: Histone H4; Histone-fold - Medicago
truncatula (Barrel medic)
Length = 289
Score = 73.3 bits (172), Expect = 1e-11
Identities = 39/57 (68%), Positives = 43/57 (75%)
Frame = +1
Query: 202 GGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTL 372
G K LIYEE R VLK+FL+N I DAVTYTEHA+RKT+TAMDVVY QGRTL
Sbjct: 15 GREKETLVLIYEEIRGVLKIFLQNEICDAVTYTEHARRKTLTAMDVVY----QGRTL 67
>UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA binding
motif, single stranded interacting protein; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
RNA binding motif, single stranded interacting protein -
Strongylocentrotus purpuratus
Length = 329
Score = 69.7 bits (163), Expect = 1e-10
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 214 RISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 321
RISGLIYEETR VLKVFLENVIRDAVTY EHAK+KT
Sbjct: 118 RISGLIYEETRGVLKVFLENVIRDAVTYCEHAKQKT 153
>UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon
cuniculi|Rep: Histone H4 - Encephalitozoon cuniculi
Length = 103
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +1
Query: 124 AXRHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTE 303
A RHRK +KPAIR +ARR GV+R+ G ++E + + ++ + + A Y
Sbjct: 19 AKRHRKQ-SSLSDSISKPAIRRIARRAGVRRVGGGCFKEINNAAREYIRDTLSIACIYAT 77
Query: 304 HAKRKTVTAMDVVYALKRQG 363
HAKRKT+T D++++LKR G
Sbjct: 78 HAKRKTITCSDILHSLKRMG 97
>UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 131
Score = 66.1 bits (154), Expect = 2e-09
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +1
Query: 181 IRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYAL 351
IR +AR GVKRISG +YEE R VLK ++E+++R + E+A++KTVTA DVV AL
Sbjct: 34 IRRMARCDGVKRISGDLYEEVRRVLKAYVEDIVRCSAACIEYARKKTVTASDVVNAL 90
>UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 116
Score = 66.1 bits (154), Expect = 2e-09
Identities = 29/63 (46%), Positives = 45/63 (71%)
Frame = +1
Query: 181 IRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 360
IR LARRGGVKRIS +YE ++ +K+++ N++RD++ Y ++ R T+ A D+ A KR
Sbjct: 48 IRRLARRGGVKRISSDVYELSKLYMKLYISNILRDSMIYANYSGRATILADDICRAAKRA 107
Query: 361 GRT 369
G+T
Sbjct: 108 GQT 110
>UniRef50_Q4RFZ6 Cluster: Chromosome undetermined SCAF15108, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF15108,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 149
Score = 63.7 bits (148), Expect = 9e-09
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = +3
Query: 180 HSKXGATRRRQTYIRPDLRGNTQRSKGFSRERYPGRGYLHRAR*KENRNSHGRGLRFEEA 359
H G+ RRR+ ++RPDLRG+ + ++G ER P R +LH AR +E+ + HGRG+R EEA
Sbjct: 35 HPPPGSARRREAHLRPDLRGDPRGAEGVPGERDPRRRHLHGARQEEDGDGHGRGVRPEEA 94
>UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania
braziliensis|Rep: Histone H4 - Leishmania braziliensis
Length = 106
Score = 62.1 bits (144), Expect = 3e-08
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +1
Query: 190 LARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 321
+ARRGGVKRISG +YEE R VLK ++E+++R + YTE+A++KT
Sbjct: 1 MARRGGVKRISGDLYEEVRRVLKAYVEDIVRCSTAYTEYARKKT 44
>UniRef50_A4VCP0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 193
Score = 57.6 bits (133), Expect = 6e-07
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = -1
Query: 417 FIYLKKKIASPAETVQRSPLPLQSVDHVHGCYGFPFSVLCVSNRVPDNVLEKNL*NAACF 238
F +L++ S ET++ S L L+ VD+VH GF SV VS+ V +NV ++ L + +
Sbjct: 39 FNFLRQIFCSTTETIESSALSLEGVDNVHSSDGFSSSVFSVSDSVSNNVFQERLQDLSGV 98
Query: 237 LVNQAGYTFDAAASRQXSNGRLRXSL-XIIXENFPVPXRASLPQAFPAFTATRHCCVSFQ 61
+VN+ G + + +S Q S+ L + + V + F FT T H C Q
Sbjct: 99 VVNERGNSLNTTSSSQSSDSGLSNTFNGSLVRLSGVSLGSDFTHTFTTFT-TGHFCKFLQ 157
Query: 60 T 58
+
Sbjct: 158 S 158
>UniRef50_Q0J1K7 Cluster: Os09g0433500 protein; n=10; Eukaryota|Rep:
Os09g0433500 protein - Oryza sativa subsp. japonica
(Rice)
Length = 781
Score = 57.2 bits (132), Expect = 8e-07
Identities = 39/106 (36%), Positives = 55/106 (51%)
Frame = -1
Query: 384 AETVQRSPLPLQSVDHVHGCYGFPFSVLCVSNRVPDNVLEKNL*NAACFLVNQAGYTFDA 205
AE V+ + L L+ VD VHG G VL V + V D+VLE++L + A LV++
Sbjct: 329 AEAVEGAALALEGVDDVHGGDGLAAGVLGVGDGVADDVLEEDLEHPAGLLVDEPRDALHP 388
Query: 204 AASRQXSNGRLRXSLXIIXENFPVPXRASLPQAFPAFTATRHCCVS 67
A RQ + RLR L ++ E+ +P SL + A TR C S
Sbjct: 389 APPRQPPDRRLRDPLDVVAEH--LPRMCSLLRCKYAAACTRSCVPS 432
>UniRef50_A2RAE9 Cluster: Histone H4; n=1; Aspergillus niger|Rep:
Histone H4 - Aspergillus niger
Length = 97
Score = 56.8 bits (131), Expect = 1e-06
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 309
R RK+L +N G T+P+IR LARRGGV RIS +Y E R +K L +IR + E +
Sbjct: 19 RLRKLLRNNIDGITRPSIRRLARRGGVIRISADVYPEVRKTVKNRLTEIIRQIILVMESS 78
Query: 310 -----KRKTVTAMDV 339
+RK V D+
Sbjct: 79 TTPGHERKLVRTQDI 93
>UniRef50_A6QZ47 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 112
Score = 55.6 bits (128), Expect = 2e-06
Identities = 38/76 (50%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPA-IRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEH 306
R RK L DN G KP IR LARRGGV RI IY+ RSV+ L +IR V E
Sbjct: 22 RLRKRLRDNIMGIAKPTTIRRLARRGGVIRIQKDIYDTVRSVVLERLREIIRRLVNLLEG 81
Query: 307 AK-----RKTVTAMDV 339
+K RKTVT DV
Sbjct: 82 SKYPNRERKTVTTRDV 97
>UniRef50_Q3LW75 Cluster: Histone H4; n=1; Bigelowiella natans|Rep:
Histone H4 - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 95
Score = 50.0 bits (114), Expect = 1e-04
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +1
Query: 169 TKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYA 348
+K +I+ LAR+ G+KR+S IY E + FL +++D + + + R + DV+
Sbjct: 24 SKLSIKRLARKSGIKRMSCTIYAEINKFIVEFLTKIVKDIIIFCRYENRTLIKVSDVLVV 83
Query: 349 LKRQGR 366
L+R G+
Sbjct: 84 LRRYGK 89
>UniRef50_Q5BH63 Cluster: Survival factor 1; n=18;
Pezizomycotina|Rep: Survival factor 1 - Emericella
nidulans (Aspergillus nidulans)
Length = 546
Score = 49.2 bits (112), Expect = 2e-04
Identities = 31/57 (54%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 190 LARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYT-EHAKRKTVTAMDVVYALKR 357
LARRGGV RI IY+E R VLK L V + T ++RK VT DVVYALKR
Sbjct: 482 LARRGGVYRIKNEIYDEIRIVLKERLAEVCLVMESGTIPSSERKLVTTRDVVYALKR 538
>UniRef50_Q9HGK9 Cluster: Histone H4 variant; n=2;
Schizosaccharomyces pombe|Rep: Histone H4 variant -
Schizosaccharomyces pombe (Fission yeast)
Length = 479
Score = 48.8 bits (111), Expect = 3e-04
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 181 IRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 360
IR LA K+I+G + EE + ++F + + D + +HA RKT+ DVV +KRQ
Sbjct: 391 IRKLANSYSQKKIAGSVIEELTTASELFFKQIANDLSAFADHAHRKTIDTQDVVLLMKRQ 450
>UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0549900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 253
Score = 48.4 bits (110), Expect = 4e-04
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +3
Query: 135 PESSQX*XSRNXEACHSKXGATRRRQTYIRPDLRGNTQRSKGFSRERYPGRGYLHRAR*K 314
PE + + EA + G R + ++ LRG+ + ++ RER+P R +LHRAR
Sbjct: 149 PEGAPRQHPGDHEAGDPEAGEEGRGEAHLGAHLRGDPRGAQDLPRERHPRRRHLHRARPP 208
Query: 315 ENRNSHGRGLR 347
++R+ HGR LR
Sbjct: 209 QDRHRHGRRLR 219
>UniRef50_Q0V9Y3 Cluster: Putative uncharacterized protein
MGC145722; n=1; Xenopus tropicalis|Rep: Putative
uncharacterized protein MGC145722 - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 777
Score = 48.0 bits (109), Expect = 5e-04
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +1
Query: 163 GXTKPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVV 342
G + I+ L ++S Y+E + LKV+ E + D Y HA RKT+T D+
Sbjct: 671 GLSSSFIKQLVNHSTQMKVSKDSYKEVETCLKVYFEQLCGDLTAYAMHANRKTITCSDIE 730
Query: 343 YALKRQG 363
++RQG
Sbjct: 731 LLMRRQG 737
>UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 131
Score = 43.6 bits (98), Expect = 0.010
Identities = 30/63 (47%), Positives = 34/63 (53%)
Frame = +1
Query: 175 PAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 354
P IR LARRGGVKRI IY+ R VL L +IR V E + T VVY L+
Sbjct: 58 PFIR-LARRGGVKRIQKSIYDTAREVLLDRLRMIIRQIVEVLESGGSSSKT-RKVVYVLQ 115
Query: 355 RQG 363
R G
Sbjct: 116 RIG 118
>UniRef50_Q8JKV9 Cluster: Histone h3, h4; n=2; root|Rep: Histone h3,
h4 - Heliothis zea virus 1
Length = 1111
Score = 42.7 bits (96), Expect = 0.018
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +1
Query: 172 KPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYAL 351
K IR A R G+ RIS +Y E +++ F++ V R E KRKTV D+ L
Sbjct: 916 KNIIRRFAERLGIDRISKDVYPELSRIIEFFMKEVKRRVTLLVECGKRKTVEIRDIKSIL 975
Query: 352 KRQG 363
K G
Sbjct: 976 KSVG 979
>UniRef50_UPI00005480BE Cluster: PREDICTED: hypothetical protein;
n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 914
Score = 39.5 bits (88), Expect = 0.17
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 214 RISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQG 363
+++ +Y +LK + + + D TY HAKRKT+ D ++RQG
Sbjct: 825 KVASDVYPVINEILKKYFDRLADDLETYATHAKRKTIEVEDFELLMRRQG 874
>UniRef50_A7F6E9 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 411
Score = 38.3 bits (85), Expect = 0.38
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 163 GXTKPAIRXLARRGGVK--RISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMD 336
G K L R GG K ++S + + F E + D TY+EHA RKT+ D
Sbjct: 339 GVVKKNAISLGRNGGGKGDKLSRDALDAIMQATEWFFEQISDDLSTYSEHAGRKTIDESD 398
Query: 337 VVYALKR 357
V+ +KR
Sbjct: 399 VLMLMKR 405
>UniRef50_Q6CGH9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 456
Score = 37.5 bits (83), Expect = 0.67
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 172 KPAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYAL 351
+P ++ L + + EE + ++F + D YT+H KRKTV DV +
Sbjct: 331 RPFLKSLVASITGDNVDKSVIEELVTSSEMFFDQAADDLAAYTDHCKRKTVEPKDVTQLM 390
Query: 352 KRQ 360
+RQ
Sbjct: 391 RRQ 393
>UniRef50_A6SS64 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 496
Score = 37.5 bits (83), Expect = 0.67
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 163 GXTKPAIRXLARRGGVK--RISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMD 336
G K LAR G + ++SG + F E + D TY+EHA RKT+ D
Sbjct: 424 GVVKKYAINLARNGAGRGDKLSGDALDAIMQATDWFFEQISDDLSTYSEHAGRKTIDESD 483
Query: 337 VVYALKR 357
V+ ++R
Sbjct: 484 VLMLMRR 490
>UniRef50_Q4JH29 Cluster: Histone; n=1; Cenarchaeum symbiosum|Rep:
Histone - Cenarchaeum symbiosum
Length = 75
Score = 36.7 bits (81), Expect = 1.2
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +1
Query: 178 AIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 357
A+ + ++ G +R+S +E R ++ ++ R+AV + HA R+TV A DV A ++
Sbjct: 12 AMYRILKKSGAQRVSDESADELRRTIEEIALSIARNAVDMSSHAGRRTVKAEDVRLASRQ 71
Query: 358 QGR 366
R
Sbjct: 72 YTR 74
>UniRef50_A7DPB5 Cluster: Transcription factor CBF/NF-Y/archaeal
histone; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: Transcription factor CBF/NF-Y/archaeal histone
- Candidatus Nitrosopumilus maritimus SCM1
Length = 78
Score = 36.7 bits (81), Expect = 1.2
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 178 AIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 354
A+ + ++ G +R+S +E R V++ + + AV HA RKTV DV A K
Sbjct: 15 AMYRILKKAGAERVSDESADELRRVIEEVANGIAKSAVDMASHAGRKTVKGEDVKLASK 73
>UniRef50_A1RX27 Cluster: Transcription factor CBF/NF-Y histone;
n=1; Thermofilum pendens Hrk 5|Rep: Transcription factor
CBF/NF-Y histone - Thermofilum pendens (strain Hrk 5)
Length = 86
Score = 36.3 bits (80), Expect = 1.5
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 181 IRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 360
+R + R G +RIS R L+ + +A+ + HA R+TVT DV +A+ R
Sbjct: 18 LRRIFRSQGAERISDDAVVFLREYLEKLAREIALEAIEASRHANRRTVTDEDVKFAISRL 77
Query: 361 GR 366
R
Sbjct: 78 QR 79
>UniRef50_Q2H4H2 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 504
Score = 35.5 bits (78), Expect = 2.7
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 172 KPAIRXLARRGGVK-RISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYA 348
K + A+ GG+K +I+ + F E + D Y +HA RKT+ DV+
Sbjct: 393 KRLAQNFAKAGGIKGKITPDAMKSIMQASDWFFEQMSEDLQAYAKHAGRKTIDESDVLTL 452
Query: 349 LKRQ 360
+KRQ
Sbjct: 453 MKRQ 456
>UniRef50_Q0UBC0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 468
Score = 35.1 bits (77), Expect = 3.6
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 181 IRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 354
+R +A G+ ++ + EE + L V+ +A+ + H KR T++ D+ +ALK
Sbjct: 10 VRDVAESVGIASLADNVVEELARDVDFRLAQVLEEAMKFMRHGKRTTLSTHDISHALK 67
>UniRef50_Q58655 Cluster: Probable archaeal histone 3; n=2;
Archaea|Rep: Probable archaeal histone 3 - Methanococcus
jannaschii
Length = 67
Score = 35.1 bits (77), Expect = 3.6
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 175 PAIRXLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 354
P +R L ++ G +R+S + L+ + R +V +HAKRKTV DV AL+
Sbjct: 8 PCVRIL-KKAGAQRVSEAAGKYFAEALEEIALEIARKSVDLAKHAKRKTVKVEDVKAALR 66
>UniRef50_A6QUY0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 387
Score = 34.7 bits (76), Expect = 4.7
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +1
Query: 130 RHRKVLXDNXQGXTKPAIRXLARRGG--VKRISGLIYEETRSVLKVFLENVIRDAVTYTE 303
RH + G K AR GG RIS + + E D TY +
Sbjct: 279 RHGIPVPQLPSGIIKKLATRFARTGGGGKSRISKDTLAAIEQATEWYFEQASDDLSTYAK 338
Query: 304 HAKRKTVTAMDVVYALKRQ 360
HA RKT+ DV ++RQ
Sbjct: 339 HAGRKTIDETDVTTLMRRQ 357
>UniRef50_P48782 Cluster: Archaeal histone A1; n=21;
Euryarchaeota|Rep: Archaeal histone A1 -
Methanobacterium formicicum
Length = 68
Score = 34.7 bits (76), Expect = 4.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 190 LARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 354
+ + G R+S + VL+ E + +AV +HA RKTV A D+ A+K
Sbjct: 12 IIKNAGAPRVSDDARDALAKVLEEMGEGIAAEAVKLAKHAGRKTVKASDIEMAVK 66
>UniRef50_Q74MT3 Cluster: NEQ288; n=1; Nanoarchaeum equitans|Rep:
NEQ288 - Nanoarchaeum equitans
Length = 82
Score = 33.9 bits (74), Expect = 8.3
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 193 ARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK 354
A++ GV R+S + L+ + ++A+ HAKRKT+ DV+ A K
Sbjct: 22 AKKVGVTRVSDKAVRLLKEKLEQIYAEIAKEALKLATHAKRKTIKKEDVLNAAK 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,228,110
Number of Sequences: 1657284
Number of extensions: 6523827
Number of successful extensions: 15198
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 14970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15194
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 118725460556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -