Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_C19
         (1198 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.85 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   2.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   7.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   7.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   7.9  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.4 bits (53), Expect = 0.85
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 834 LRIIRDLSVFTPHNFTSLRDKTQLRNINFNHCTLSYD 724
           LR+IRDLS++    ++ LR K  +R+  +    L+Y+
Sbjct: 13  LRLIRDLSLYFSVIYSLLRVKRMMRSWYYLLTNLTYN 49


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
 Frame = +1

Query: 217 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLS 396
           RG K  +  KE + E ++ + KIK    + VK +++ +     P+ L+    + R K LS
Sbjct: 175 RGTKIVLHMKEDQTEFLE-EHKIK----EIVKKHSQFIG---YPIKLVVE--KEREKELS 224

Query: 397 N-MIKQKRKEKAGK-WDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTK 543
           +   ++++KE+ G+  D   PK+    + E     K  K K+K  K   T+
Sbjct: 225 DDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTE 275


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 11/43 (25%), Positives = 26/43 (60%)
 Frame = +1

Query: 655 ATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQ 783
           +T+CL ++ V  + S Q   ++    + T+++VN+S++   T+
Sbjct: 289 STYCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR 331


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 11/43 (25%), Positives = 26/43 (60%)
 Frame = +1

Query: 655 ATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQ 783
           +T+CL ++ V  + S Q   ++    + T+++VN+S++   T+
Sbjct: 289 STYCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR 331


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 11/43 (25%), Positives = 26/43 (60%)
 Frame = +1

Query: 655 ATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQ 783
           +T+CL ++ V  + S Q   ++    + T+++VN+S++   T+
Sbjct: 289 STYCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,086
Number of Sequences: 336
Number of extensions: 4252
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34835979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)