Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C17
(1222 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024242-1|AAH24242.1| 217|Homo sapiens GrpE-like 1, mitochondr... 152 2e-36
AF298592-1|AAG31605.1| 216|Homo sapiens GrpE-like protein cocha... 152 2e-36
AF087896-1|AAP97195.1| 217|Homo sapiens stress-inducible chaper... 152 2e-36
BC070090-1|AAH70090.1| 225|Homo sapiens GrpE-like 2, mitochondr... 116 2e-25
BC036678-1|AAH36678.1| 225|Homo sapiens GrpE-like 2, mitochondr... 116 2e-25
AL832325-1|CAD38619.1| 232|Homo sapiens hypothetical protein pr... 116 2e-25
AK074293-1|BAB85040.1| 225|Homo sapiens protein ( Homo sapiens ... 116 2e-25
BC117174-1|AAI17175.1| 1291|Homo sapiens KIF15 protein protein. 34 0.91
AK027816-1|BAB55389.1| 436|Homo sapiens protein ( Homo sapiens ... 34 1.2
AF308294-1|AAG48261.1| 312|Homo sapiens serologically defined b... 34 1.2
AB035898-1|BAB03309.1| 1388|Homo sapiens kinesin-like protein 2 ... 34 1.2
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 32 4.9
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 32 4.9
AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F, 3... 32 4.9
AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F, 3... 32 4.9
BC073970-1|AAH73970.1| 855|Homo sapiens bicaudal D homolog 2 (D... 31 6.4
AY052562-1|AAL12246.1| 824|Homo sapiens coiled-coil protein BIC... 31 6.4
AL137074-4|CAI14370.1| 855|Homo sapiens bicaudal D homolog 2 (D... 31 6.4
AL137074-3|CAI14369.1| 824|Homo sapiens bicaudal D homolog 2 (D... 31 6.4
AL136981-2|CAI41014.1| 855|Homo sapiens bicaudal D homolog 2 (D... 31 6.4
AL136981-1|CAI41013.1| 824|Homo sapiens bicaudal D homolog 2 (D... 31 6.4
AB014599-1|BAA31674.1| 847|Homo sapiens KIAA0699 protein protein. 31 6.4
X16479-1|CAA34500.2| 225|Homo sapiens topoisomerase I protein. 31 8.5
U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein. 31 8.5
U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein. 31 8.5
M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein. 31 8.5
J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein. 31 8.5
BC000943-1|AAH00943.1| 176|Homo sapiens Unknown (protein for IM... 31 8.5
AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I p... 31 8.5
AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I p... 31 8.5
>BC024242-1|AAH24242.1| 217|Homo sapiens GrpE-like 1, mitochondrial
(E. coli) protein.
Length = 217
Score = 152 bits (369), Expect = 2e-36
Identities = 79/159 (49%), Positives = 103/159 (64%)
Frame = +1
Query: 289 ESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADT 468
++L E ++EQ + +KYKRALAD EN+R+R K VE+AK + IQ+FCKDLLEVAD
Sbjct: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADV 117
Query: 469 LTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHE 648
L L+ L++G+ +T Q+ +VF +HGL+ ++P+ KFDP HE
Sbjct: 118 LEKATQCVPKEEIKDDNPH-LKNLYEGLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHE 176
Query: 649 ALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVAK 765
ALF VEG E GTV VSKVGYKLH R +RPALVGV K
Sbjct: 177 ALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215
>AF298592-1|AAG31605.1| 216|Homo sapiens GrpE-like protein
cochaperone protein.
Length = 216
Score = 152 bits (369), Expect = 2e-36
Identities = 79/159 (49%), Positives = 103/159 (64%)
Frame = +1
Query: 289 ESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADT 468
++L E ++EQ + +KYKRALAD EN+R+R K VE+AK + IQ+FCKDLLEVAD
Sbjct: 57 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADV 116
Query: 469 LTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHE 648
L L+ L++G+ +T Q+ +VF +HGL+ ++P+ KFDP HE
Sbjct: 117 LEKATQCVPKEEIKDDNPH-LKNLYEGLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHE 175
Query: 649 ALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVAK 765
ALF VEG E GTV VSKVGYKLH R +RPALVGV K
Sbjct: 176 ALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 214
>AF087896-1|AAP97195.1| 217|Homo sapiens stress-inducible chaperone
GrpE protein.
Length = 217
Score = 152 bits (369), Expect = 2e-36
Identities = 79/159 (49%), Positives = 103/159 (64%)
Frame = +1
Query: 289 ESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADT 468
++L E ++EQ + +KYKRALAD EN+R+R K VE+AK + IQ+FCKDLLEVAD
Sbjct: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADV 117
Query: 469 LTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHE 648
L L+ L++G+ +T Q+ +VF +HGL+ ++P+ KFDP HE
Sbjct: 118 LEKATQCVPKEEIKDDNPH-LKNLYEGLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHE 176
Query: 649 ALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVAK 765
ALF VEG E GTV VSKVGYKLH R +RPALVGV K
Sbjct: 177 ALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215
>BC070090-1|AAH70090.1| 225|Homo sapiens GrpE-like 2, mitochondrial
(E. coli) protein.
Length = 225
Score = 116 bits (279), Expect = 2e-25
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 316 IKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXX 495
++++ D+ +Y+RA+AD EN+R+R + VEDAK F IQSFCKDL+EVAD L
Sbjct: 69 LEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECIS 128
Query: 496 XXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEV-E 672
L + G+ L A+L VFA+HGL ++P+ +K+DP+ HE +
Sbjct: 129 EESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGV 188
Query: 673 GAESGTVVAVSKVGYKLHERCVRPALVGVA 762
G + GTV V + GYKLH R +R A V VA
Sbjct: 189 GVQPGTVALVRQDGYKLHGRTIRLARVEVA 218
>BC036678-1|AAH36678.1| 225|Homo sapiens GrpE-like 2, mitochondrial
(E. coli) protein.
Length = 225
Score = 116 bits (279), Expect = 2e-25
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 316 IKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXX 495
++++ D+ +Y+RA+AD EN+R+R + VEDAK F IQSFCKDL+EVAD L
Sbjct: 69 LEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECIS 128
Query: 496 XXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEV-E 672
L + G+ L A+L VFA+HGL ++P+ +K+DP+ HE +
Sbjct: 129 EESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGV 188
Query: 673 GAESGTVVAVSKVGYKLHERCVRPALVGVA 762
G + GTV V + GYKLH R +R A V VA
Sbjct: 189 GVQPGTVALVRQDGYKLHGRTIRLARVEVA 218
>AL832325-1|CAD38619.1| 232|Homo sapiens hypothetical protein
protein.
Length = 232
Score = 116 bits (279), Expect = 2e-25
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 316 IKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXX 495
++++ D+ +Y+RA+AD EN+R+R + VEDAK F IQSFCKDL+EVAD L
Sbjct: 76 LEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECIS 135
Query: 496 XXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEV-E 672
L + G+ L A+L VFA+HGL ++P+ +K+DP+ HE +
Sbjct: 136 EESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGV 195
Query: 673 GAESGTVVAVSKVGYKLHERCVRPALVGVA 762
G + GTV V + GYKLH R +R A V VA
Sbjct: 196 GVQPGTVALVRQDGYKLHGRTIRLARVEVA 225
>AK074293-1|BAB85040.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ23713 fis, clone HEP12771, highly similar to
GRPE PROTEIN HOMOLOG 2 PRECURSOR. ).
Length = 225
Score = 116 bits (279), Expect = 2e-25
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 316 IKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXX 495
++++ D+ +Y+RA+AD EN+R+R + VEDAK F IQSFCKDL+EVAD L
Sbjct: 69 LEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECIS 128
Query: 496 XXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEV-E 672
L + G+ L A+L VFA+HGL ++P+ +K+DP+ HE +
Sbjct: 129 EESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGV 188
Query: 673 GAESGTVVAVSKVGYKLHERCVRPALVGVA 762
G + GTV V + GYKLH R +R A V VA
Sbjct: 189 GVQPGTVALVRQDGYKLHGRTIRLARVEVA 218
>BC117174-1|AAI17175.1| 1291|Homo sapiens KIF15 protein protein.
Length = 1291
Score = 34.3 bits (75), Expect = 0.91
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 265 IXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVED 411
I E + T ++++K++ DIN KY AL D E R + KQ D
Sbjct: 894 IQELRSSVCEKTETIDTLKQELKDINCKYNSALVDREESRVLIKKQEVD 942
>AK027816-1|BAB55389.1| 436|Homo sapiens protein ( Homo sapiens
cDNA FLJ14910 fis, clone PLACE1006368, weakly similar to
HYALURONAN-MEDIATED MOTILITY RECEPTOR. ).
Length = 436
Score = 33.9 bits (74), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 265 IXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVED 411
I E + T ++++K++ DIN KY AL D E R + KQ D
Sbjct: 39 IQELRTSVCEKTETIDTLKQELKDINCKYNSALVDREESRVLIKKQEVD 87
>AF308294-1|AAG48261.1| 312|Homo sapiens serologically defined
breast cancer antigen NY-BR-62 protein.
Length = 312
Score = 33.9 bits (74), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 265 IXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVED 411
I E + T ++++K++ DIN KY AL D E R + KQ D
Sbjct: 206 IQELRTSVCEKTETIDTLKQELKDINCKYNSALVDREESRVLIKKQEVD 254
>AB035898-1|BAB03309.1| 1388|Homo sapiens kinesin-like protein 2
protein.
Length = 1388
Score = 33.9 bits (74), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 265 IXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVED 411
I E + T ++++K++ DIN KY AL D E R + KQ D
Sbjct: 991 IQELRTSVCEKTETIDTLKQELKDINCKYNSALVDREESRVLIKKQEVD 1039
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 31.9 bits (69), Expect = 4.9
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 244 NDKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSF 423
N KL + EC E+ NE+ +KE F + ++ LA E + ++ ++E +
Sbjct: 1049 NSKLECLLNECTSLCENRKNELEQLKEAFAKEHQEFLTKLAFAEERNQNLMLELETVQQ- 1107
Query: 424 AIQSFCKD 447
A++S D
Sbjct: 1108 ALRSEMTD 1115
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 31.9 bits (69), Expect = 4.9
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 244 NDKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSF 423
N KL + EC E+ NE+ +KE F + ++ LA E + ++ ++E +
Sbjct: 1050 NSKLECLLNECTSLCENRKNELEQLKEAFAKEHQEFLTKLAFAEERNQNLMLELETVQQ- 1108
Query: 424 AIQSFCKD 447
A++S D
Sbjct: 1109 ALRSEMTD 1116
>AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 31.9 bits (69), Expect = 4.9
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 244 NDKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSF 423
N KL + EC E+ NE+ +KE F + ++ LA E + ++ ++E +
Sbjct: 1050 NSKLECLLNECTSLCENRKNELEQLKEAFAKEHQEFLTKLAFAEERNQNLMLELETVQQ- 1108
Query: 424 AIQSFCKD 447
A++S D
Sbjct: 1109 ALRSEMTD 1116
>AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 31.9 bits (69), Expect = 4.9
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 244 NDKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSF 423
N KL + EC E+ NE+ +KE F + ++ LA E + ++ ++E +
Sbjct: 1050 NSKLECLLNECTSLCENRKNELEQLKEAFAKEHQEFLTKLAFAEERNQNLMLELETVQQ- 1108
Query: 424 AIQSFCKD 447
A++S D
Sbjct: 1109 ALRSEMTD 1116
>BC073970-1|AAH73970.1| 855|Homo sapiens bicaudal D homolog 2
(Drosophila) protein.
Length = 855
Score = 31.5 bits (68), Expect = 6.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +1
Query: 250 KLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAI 429
+L E E++ +E+ +KE F + +K+ ADGE+ + ++++ + + +
Sbjct: 56 QLKLQFEELEVDYEAIRSEMEQLKEAFGQAHTNHKKVAADGESREESLIQESASKEQYYV 115
Query: 430 Q 432
+
Sbjct: 116 R 116
>AY052562-1|AAL12246.1| 824|Homo sapiens coiled-coil protein BICD2
protein.
Length = 824
Score = 31.5 bits (68), Expect = 6.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +1
Query: 250 KLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAI 429
+L E E++ +E+ +KE F + +K+ ADGE+ + ++++ + + +
Sbjct: 56 QLKLQFEELEVDYEAIRSEMEQLKEAFGQAHTNHKKVAADGESREESLIQESASKEQYYV 115
Query: 430 Q 432
+
Sbjct: 116 R 116
>AL137074-4|CAI14370.1| 855|Homo sapiens bicaudal D homolog 2
(Drosophila) protein.
Length = 855
Score = 31.5 bits (68), Expect = 6.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +1
Query: 250 KLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAI 429
+L E E++ +E+ +KE F + +K+ ADGE+ + ++++ + + +
Sbjct: 56 QLKLQFEELEVDYEAIRSEMEQLKEAFGQAHTNHKKVAADGESREESLIQESASKEQYYV 115
Query: 430 Q 432
+
Sbjct: 116 R 116
>AL137074-3|CAI14369.1| 824|Homo sapiens bicaudal D homolog 2
(Drosophila) protein.
Length = 824
Score = 31.5 bits (68), Expect = 6.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +1
Query: 250 KLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAI 429
+L E E++ +E+ +KE F + +K+ ADGE+ + ++++ + + +
Sbjct: 56 QLKLQFEELEVDYEAIRSEMEQLKEAFGQAHTNHKKVAADGESREESLIQESASKEQYYV 115
Query: 430 Q 432
+
Sbjct: 116 R 116
>AL136981-2|CAI41014.1| 855|Homo sapiens bicaudal D homolog 2
(Drosophila) protein.
Length = 855
Score = 31.5 bits (68), Expect = 6.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +1
Query: 250 KLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAI 429
+L E E++ +E+ +KE F + +K+ ADGE+ + ++++ + + +
Sbjct: 56 QLKLQFEELEVDYEAIRSEMEQLKEAFGQAHTNHKKVAADGESREESLIQESASKEQYYV 115
Query: 430 Q 432
+
Sbjct: 116 R 116
>AL136981-1|CAI41013.1| 824|Homo sapiens bicaudal D homolog 2
(Drosophila) protein.
Length = 824
Score = 31.5 bits (68), Expect = 6.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +1
Query: 250 KLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAI 429
+L E E++ +E+ +KE F + +K+ ADGE+ + ++++ + + +
Sbjct: 56 QLKLQFEELEVDYEAIRSEMEQLKEAFGQAHTNHKKVAADGESREESLIQESASKEQYYV 115
Query: 430 Q 432
+
Sbjct: 116 R 116
>AB014599-1|BAA31674.1| 847|Homo sapiens KIAA0699 protein protein.
Length = 847
Score = 31.5 bits (68), Expect = 6.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +1
Query: 250 KLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAI 429
+L E E++ +E+ +KE F + +K+ ADGE+ + ++++ + + +
Sbjct: 48 QLKLQFEELEVDYEAIRSEMEQLKEAFGQAHTNHKKVAADGESREESLIQESASKEQYYV 107
Query: 430 Q 432
+
Sbjct: 108 R 108
>X16479-1|CAA34500.2| 225|Homo sapiens topoisomerase I protein.
Length = 225
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 459
K + +L ++++ KEQ D K A AD + ++ K+V ++K A+Q + L+++
Sbjct: 102 KSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKL 161
>U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 459
K + +L ++++ KEQ D K A AD + ++ K+V ++K A+Q + L+++
Sbjct: 638 KSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKL 697
>U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 459
K + +L ++++ KEQ D K A AD + ++ K+V ++K A+Q + L+++
Sbjct: 638 KSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKL 697
>M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein.
Length = 765
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 459
K + +L ++++ KEQ D K A AD + ++ K+V ++K A+Q + L+++
Sbjct: 642 KSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKL 701
>J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein.
Length = 765
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 459
K + +L ++++ KEQ D K A AD + ++ K+V ++K A+Q + L+++
Sbjct: 642 KSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKL 701
>BC000943-1|AAH00943.1| 176|Homo sapiens Unknown (protein for
IMAGE:3448011) protein.
Length = 176
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 459
K + +L ++++ KEQ D K A AD + ++ K+V ++K A+Q + L+++
Sbjct: 53 KSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKL 112
>AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 459
K + +L ++++ KEQ D K A AD + ++ K+V ++K A+Q + L+++
Sbjct: 642 KSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKL 701
>AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 459
K + +L ++++ KEQ D K A AD + ++ K+V ++K A+Q + L+++
Sbjct: 642 KSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKL 701
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,872,617
Number of Sequences: 237096
Number of extensions: 2408754
Number of successful extensions: 6051
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6040
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17284516220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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