Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C17
(1222 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094889-1|AAM11242.1| 213|Drosophila melanogaster RE56495p pro... 184 3e-46
AE013599-1747|AAF58354.1| 213|Drosophila melanogaster CG6155-PA... 184 3e-46
U34903-1|AAA79044.1| 213|Drosophila melanogaster droe1 protein. 180 4e-45
AY060856-1|AAL28404.1| 183|Drosophila melanogaster GM03203p pro... 88 3e-17
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 31 3.2
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 31 3.2
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 31 3.2
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 31 3.2
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 31 3.2
X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin ... 30 5.6
>AY094889-1|AAM11242.1| 213|Drosophila melanogaster RE56495p
protein.
Length = 213
Score = 184 bits (447), Expect = 3e-46
Identities = 91/165 (55%), Positives = 115/165 (69%)
Frame = +1
Query: 271 ECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDL 450
E ++E LT E+ + KEQ ++ DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDL
Sbjct: 50 ESSPEVEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDL 109
Query: 451 LEVADTLTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKF 630
LEVADTL L+ L++G+ +TRA L QVF RHGL P+ P+ +KF
Sbjct: 110 LEVADTL--GHATQAVPKDKLSGNADLKNLYEGLTMTRASLLQVFKRHGLKPLDPINQKF 167
Query: 631 DPNLHEALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVAK 765
DPN HEALFQ+E + E TVV V+K+GYKLHERC+RPALVGV+K
Sbjct: 168 DPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGVSK 212
>AE013599-1747|AAF58354.1| 213|Drosophila melanogaster CG6155-PA
protein.
Length = 213
Score = 184 bits (447), Expect = 3e-46
Identities = 91/165 (55%), Positives = 115/165 (69%)
Frame = +1
Query: 271 ECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDL 450
E ++E LT E+ + KEQ ++ DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDL
Sbjct: 50 ESSPEVEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDL 109
Query: 451 LEVADTLTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKF 630
LEVADTL L+ L++G+ +TRA L QVF RHGL P+ P+ +KF
Sbjct: 110 LEVADTL--GHATQAVPKDKLSGNADLKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKF 167
Query: 631 DPNLHEALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVAK 765
DPN HEALFQ+E + E TVV V+K+GYKLHERC+RPALVGV+K
Sbjct: 168 DPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGVSK 212
>U34903-1|AAA79044.1| 213|Drosophila melanogaster droe1 protein.
Length = 213
Score = 180 bits (438), Expect = 4e-45
Identities = 90/165 (54%), Positives = 114/165 (69%)
Frame = +1
Query: 271 ECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDL 450
E ++E LT E+ + KEQ ++ DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDL
Sbjct: 50 ESSPELEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDL 109
Query: 451 LEVADTLTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKF 630
LEVADTL L+ L++G+ +TRA L QVF RHGL + P+ +KF
Sbjct: 110 LEVADTL--GHATQAVPKDKLSGNTDLKNLYEGLTMTRASLLQVFKRHGLESLDPINQKF 167
Query: 631 DPNLHEALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVAK 765
DPN HEALFQ+E + E TVV V+K+GYKLHERC+RPALVGV+K
Sbjct: 168 DPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGVSK 212
>AY060856-1|AAL28404.1| 183|Drosophila melanogaster GM03203p
protein.
Length = 183
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +1
Query: 271 ECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDL 450
E ++E LT E+ + KEQ ++ DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDL
Sbjct: 50 ESSPEVEKLTKELATAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDL 109
Query: 451 LEVADTL 471
LEVADTL
Sbjct: 110 LEVADTL 116
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +1
Query: 640 LHEALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVAK 765
L EALFQ+E + E TVV V+K+GYKLHERC+RPALVGV+K
Sbjct: 141 LTEALFQKEDKTVEPKTVVEVTKLGYKLHERCIRPALVGVSK 182
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p protein.
Length = 1689
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +1
Query: 259 ATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 435
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 923 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 980
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +1
Query: 259 ATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 435
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 886 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 943
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +1
Query: 259 ATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 435
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 911 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 968
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +1
Query: 259 ATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 435
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 923 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 980
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +1
Query: 259 ATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 435
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 924 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 981
>X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin C
protein protein.
Length = 621
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 244 NDKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 369
ND L + + K+ N + ++N++N KY +ALAD
Sbjct: 128 NDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQALAD 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,902,262
Number of Sequences: 53049
Number of extensions: 705627
Number of successful extensions: 1831
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1828
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6499020495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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