Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C17
(1222 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46996-6|CAA87101.1| 237|Caenorhabditis elegans Hypothetical pr... 140 2e-33
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 31 1.7
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 2.2
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 2.2
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 2.2
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 2.2
Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical pr... 30 2.9
L23110-1|AAA03544.1| 744|Caenorhabditis elegans BMP receptor pr... 30 2.9
AF047651-12|AAN63460.1| 592|Caenorhabditis elegans Abnormal dau... 30 2.9
AF047651-11|AAO61443.1| 446|Caenorhabditis elegans Abnormal dau... 30 2.9
AF047651-10|AAC02726.1| 744|Caenorhabditis elegans Abnormal dau... 30 2.9
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 6.7
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 6.7
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 6.7
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 6.7
U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical pr... 29 6.7
AF016447-4|AAG24011.2| 352|Caenorhabditis elegans Serpentine re... 29 6.7
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 29 8.8
>Z46996-6|CAA87101.1| 237|Caenorhabditis elegans Hypothetical
protein C34C12.8 protein.
Length = 237
Score = 140 bits (338), Expect = 2e-33
Identities = 74/157 (47%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
Frame = +1
Query: 295 LTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLT 474
L E + ++ + D DKY+R+LA+ ENVR+R +KQ +DAK FAIQSFCKDLLEV+D L
Sbjct: 79 LLKEYDDLQAESLDFKDKYQRSLAETENVRRRGIKQTDDAKVFAIQSFCKDLLEVSDIL- 137
Query: 475 XXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEAL 654
L+ L +GV +TR + + FA+HGLV V P EKFDPNLHEA+
Sbjct: 138 DIAVKSVKPEDLESGGKALKDLFEGVSMTRTVMAKTFAKHGLVTVDPTNEKFDPNLHEAV 197
Query: 655 FQQEVEGAES--GTVVAVSKVGYKLHERCVRPALVGV 759
FQ A+ G + +K+GY L ER +RPA VGV
Sbjct: 198 FQIPSANAKQPVGHIEVCTKIGYSLKERPIRPAQVGV 234
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 304 EVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLE 456
+VNSI + ++I DKY+R + GE RKR L+ E K + + DL E
Sbjct: 1052 QVNSIGGKQSEIEDKYQRLMMLGE-TRKRKLE--EACKGYQLLREANDLAE 1099
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 247 DKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFA 426
DKL + + ++SL E++S+KEQ N + K L E + ++ ++++
Sbjct: 742 DKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVK 801
Query: 427 IQSFCKD 447
+Q KD
Sbjct: 802 LQLAEKD 808
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 247 DKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFA 426
DKL + + ++SL E++S+KEQ N + K L E + ++ ++++
Sbjct: 742 DKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVK 801
Query: 427 IQSFCKD 447
+Q KD
Sbjct: 802 LQLAEKD 808
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 247 DKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFA 426
DKL + + ++SL E++S+KEQ N + K L E + ++ ++++
Sbjct: 502 DKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVK 561
Query: 427 IQSFCKD 447
+Q KD
Sbjct: 562 LQLAEKD 568
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 247 DKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFA 426
DKL + + ++SL E++S+KEQ N + K L E + ++ ++++
Sbjct: 742 DKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVK 801
Query: 427 IQSFCKD 447
+Q KD
Sbjct: 802 LQLAEKD 808
>Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical
protein Y70C5C.4 protein.
Length = 327
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 447 ILAEALYGKGLGVFDLFQHPLPYILAVR*RSLVFVINVIELFF 319
+L A G+ LGV D FQ P+P + SL+ + LFF
Sbjct: 74 LLYSACLGRALGVLDYFQVPIPVQIYFGITSLLVTAVAVLLFF 116
>L23110-1|AAA03544.1| 744|Caenorhabditis elegans BMP receptor
protein.
Length = 744
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 677 APSTSCWNNASCRFGSNFSRRGDTGTRPCRANTC 576
A S +C N +SCR G +F RG G C N C
Sbjct: 158 ADSMNCENESSCRQGRSF--RGGIGMCCCSTNNC 189
>AF047651-12|AAN63460.1| 592|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform c protein.
Length = 592
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 677 APSTSCWNNASCRFGSNFSRRGDTGTRPCRANTC 576
A S +C N +SCR G +F RG G C N C
Sbjct: 6 ADSMNCENESSCRQGRSF--RGGIGMCCCSTNNC 37
>AF047651-11|AAO61443.1| 446|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform d protein.
Length = 446
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 677 APSTSCWNNASCRFGSNFSRRGDTGTRPCRANTC 576
A S +C N +SCR G +F RG G C N C
Sbjct: 158 ADSMNCENESSCRQGRSF--RGGIGMCCCSTNNC 189
>AF047651-10|AAC02726.1| 744|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform a protein.
Length = 744
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 677 APSTSCWNNASCRFGSNFSRRGDTGTRPCRANTC 576
A S +C N +SCR G +F RG G C N C
Sbjct: 158 ADSMNCENESSCRQGRSF--RGGIGMCCCSTNNC 189
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 29.5 bits (63), Expect = 5.0
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +1
Query: 136 IAKSLADPTLSPNLTXKTFSPSVRXXXXXXXXXXXXNDKLPAT---IXECHKQIESLTNE 306
I S + P+LSP L + SPS + PA H+Q+E T +
Sbjct: 527 IMASRSRPSLSPQL--RQLSPSESASSFDESVNLSFHKLEPAEHAGYVMAHQQMEKTTAQ 584
Query: 307 VNSIKEQFNDINDKYKRALADGENVRKRMLKQ 402
+N ++I + + +AD N ++R + Q
Sbjct: 585 LNERANAVSNIRTQMEEKIADSSNSKQRPISQ 616
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/72 (22%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 265 IXECHKQIESLTNEVNSIKEQFNDIND---KYKRALADGENVRKRMLKQVEDAKSFAIQS 435
+ E K+++ L NE+N +QF+ + + + K + EN + ++ KQ+++ + S
Sbjct: 949 VRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQKQMDEEDRRSEFS 1008
Query: 436 FCKDLLEVADTL 471
F +++ + L
Sbjct: 1009 FKEEIASLKQKL 1020
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/72 (22%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 265 IXECHKQIESLTNEVNSIKEQFNDIND---KYKRALADGENVRKRMLKQVEDAKSFAIQS 435
+ E K+++ L NE+N +QF+ + + + K + EN + ++ KQ+++ + S
Sbjct: 949 VRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQKQMDEEDRRSEFS 1008
Query: 436 FCKDLLEVADTL 471
F +++ + L
Sbjct: 1009 FKEEIASLKQKL 1020
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 244 NDKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKS 420
ND+L TI +I L NE++S + +ND +R + +++ + LK D ++
Sbjct: 832 NDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA 890
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 244 NDKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKS 420
ND+L TI +I L NE++S + +ND +R + +++ + LK D ++
Sbjct: 905 NDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA 963
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 244 NDKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKS 420
ND+L TI +I L NE++S + +ND +R + +++ + LK D ++
Sbjct: 905 NDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA 963
>U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical
protein B0286.1 protein.
Length = 230
Score = 29.1 bits (62), Expect = 6.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 280 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVE 408
K IE E+ +KE+ + +K K +D + K LKQ E
Sbjct: 88 KTIEKYEQEIAGLKEKIEGLEEKVKNNYSDENSSLKEELKQCE 130
>AF016447-4|AAG24011.2| 352|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 18 protein.
Length = 352
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2
Query: 798 NFICFFLFLHLFRH 757
NFICFFL + LFRH
Sbjct: 216 NFICFFLSIGLFRH 229
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 28.7 bits (61), Expect = 8.8
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 DKLPATIXECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVE-DAKSF 423
DKL I ++I + EVN IK+ +K KR + E +R+R Q E +++
Sbjct: 361 DKLKDDISSREREINAQKEEVNRIKDSLR--LEKSKRNELEEEVLRQRRCAQEEIESRDQ 418
Query: 424 AIQSFCKDLL 453
I++F K L+
Sbjct: 419 EIEAFRKMLV 428
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,417,451
Number of Sequences: 27780
Number of extensions: 348327
Number of successful extensions: 1071
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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