Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_C15
         (1272 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575...    31   1.5  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.9  
06_03_0381 - 20106714-20107088,20107177-20107594,20107721-201079...    29   5.9  

>12_01_0674 +
           5755523-5755613,5756325-5756366,5756830-5756915,
           5757008-5757079,5757450-5757525,5757765-5757826,
           5758119-5758178,5758293-5758394
          Length = 196

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -1

Query: 897 RGFRWVSELVEDCSKEYSTIDWIQVYHVAMTQSTISQLSRF 775
           +GFR + +L+E C  +Y+T D +Q+  V +     + ++RF
Sbjct: 119 KGFRAIEKLLEGCRSKYATGDEVQLADVFLAPQIHAGITRF 159


>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 15/52 (28%), Positives = 16/52 (30%)
 Frame = -2

Query: 1142 SPXVXXXGPXXPPXPXXXXXTKXFXPPXXLPXKPXNXXPXXXFXFXLPXXPP 987
            SP      P  PP P        F PP   P  P    P   +    P  PP
Sbjct: 538  SPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPP 589


>06_03_0381 -
           20106714-20107088,20107177-20107594,20107721-20107970,
           20108109-20108169,20108346-20108422,20108557-20109007
          Length = 543

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
 Frame = +3

Query: 564 FRKNXDLTXSLFFWKKAIASSVTRRYSASGGAGLRCDGASIRANI----RSSESELFRIH 731
           FRK    T  LF  + AIAS+     + +  A  R DGA    N      SS   L R  
Sbjct: 315 FRKEGKPTSHLFDVRDAIASTRVTSATTAAAADHRLDGAGKAGNFDWIGSSSSRPLTRTM 374

Query: 732 SAQGQTAXGRNH 767
           SA      G +H
Sbjct: 375 SAAAAATMGDHH 386


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,345,412
Number of Sequences: 37544
Number of extensions: 373579
Number of successful extensions: 917
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3945842028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)