Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_C15
         (1272 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025930-1|AAH25930.1|  608|Homo sapiens nuclear protein localiz...    49   4e-05
AK000664-1|BAA91314.1|  608|Homo sapiens protein ( Homo sapiens ...    49   4e-05
AB040932-1|BAA96023.1|  660|Homo sapiens KIAA1499 protein protein.     49   4e-05

>BC025930-1|AAH25930.1|  608|Homo sapiens nuclear protein
           localization 4 homolog (S. cerevisiae) protein.
          Length = 608

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 20/74 (27%), Positives = 42/74 (56%)
 Frame = +1

Query: 613 LLRVQSPEGTARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRXEEITSSKSRQLR 792
           ++RVQSP+G  R+     +  A   +++ +     +  F+++ +R +  EIT+S ++ L 
Sbjct: 6   IIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSNKSLN 65

Query: 793 DCGLCHGDMIYLNP 834
              + HGD+++L P
Sbjct: 66  LLKIKHGDLLFLFP 79


>AK000664-1|BAA91314.1|  608|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20657 fis, clone KAT01069. ).
          Length = 608

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 20/74 (27%), Positives = 42/74 (56%)
 Frame = +1

Query: 613 LLRVQSPEGTARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRXEEITSSKSRQLR 792
           ++RVQSP+G  R+     +  A   +++ +     +  F+++ +R +  EIT+S ++ L 
Sbjct: 6   IIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSNKSLN 65

Query: 793 DCGLCHGDMIYLNP 834
              + HGD+++L P
Sbjct: 66  LLKIKHGDLLFLFP 79


>AB040932-1|BAA96023.1|  660|Homo sapiens KIAA1499 protein protein.
          Length = 660

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 20/74 (27%), Positives = 42/74 (56%)
 Frame = +1

Query: 613 LLRVQSPEGTARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRXEEITSSKSRQLR 792
           ++RVQSP+G  R+     +  A   +++ +     +  F+++ +R +  EIT+S ++ L 
Sbjct: 49  IIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSNKSLN 108

Query: 793 DCGLCHGDMIYLNP 834
              + HGD+++L P
Sbjct: 109 LLKIKHGDLLFLFP 122


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,592,345
Number of Sequences: 237096
Number of extensions: 2154679
Number of successful extensions: 5781
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5720
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18220302130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)