Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_C15
         (1272 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058286-1|AAL13515.1|  652|Drosophila melanogaster GH03617p pro...    53   7e-07
AE014297-3818|AAF56480.3|  652|Drosophila melanogaster CG4673-PA...    53   7e-07
AE014297-3817|AAN14058.2|  624|Drosophila melanogaster CG4673-PB...    53   1e-06

>AY058286-1|AAL13515.1|  652|Drosophila melanogaster GH03617p
           protein.
          Length = 652

 Score = 53.2 bits (122), Expect = 7e-07
 Identities = 30/79 (37%), Positives = 44/79 (55%)
 Frame = +1

Query: 607 RKLLRVQSPEGTARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRXEEITSSKSRQ 786
           + L+RVQS EG  R+E+       HL++ +  AL ++ F   L K+R    E+ +S S Q
Sbjct: 33  QSLIRVQSAEGIKRIEISPKSNLKHLYDSVQNALKVDGFG--LFKERNFLTELQASGS-Q 89

Query: 787 LRDCGLCHGDMIYLNPVNG 843
           L    L HGDM+YL  + G
Sbjct: 90  LVGTSLRHGDMVYLKQMAG 108


>AE014297-3818|AAF56480.3|  652|Drosophila melanogaster CG4673-PA,
           isoform A protein.
          Length = 652

 Score = 53.2 bits (122), Expect = 7e-07
 Identities = 30/79 (37%), Positives = 44/79 (55%)
 Frame = +1

Query: 607 RKLLRVQSPEGTARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRXEEITSSKSRQ 786
           + L+RVQS EG  R+E+       HL++ +  AL ++ F   L K+R    E+ +S S Q
Sbjct: 33  QSLIRVQSAEGIKRIEISPKSNLKHLYDSVQNALKVDGFG--LFKERNFLTELQASGS-Q 89

Query: 787 LRDCGLCHGDMIYLNPVNG 843
           L    L HGDM+YL  + G
Sbjct: 90  LVGTSLRHGDMVYLKQMAG 108


>AE014297-3817|AAN14058.2|  624|Drosophila melanogaster CG4673-PB,
           isoform B protein.
          Length = 624

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 30/77 (38%), Positives = 43/77 (55%)
 Frame = +1

Query: 613 LLRVQSPEGTARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRXEEITSSKSRQLR 792
           L+RVQS EG  R+E+       HL++ +  AL ++ F   L K+R    E+ +S S QL 
Sbjct: 7   LIRVQSAEGIKRIEISPKSNLKHLYDSVQNALKVDGFG--LFKERNFLTELQASGS-QLV 63

Query: 793 DCGLCHGDMIYLNPVNG 843
              L HGDM+YL  + G
Sbjct: 64  GTSLRHGDMVYLKQMAG 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,619,857
Number of Sequences: 53049
Number of extensions: 633292
Number of successful extensions: 1777
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1770
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6845363280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)