Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C14
(1211 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 79 1e-15
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 68 2e-12
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 64 4e-11
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 60 6e-10
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 59 1e-09
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 57 6e-09
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 55 2e-08
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 54 3e-08
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 48 3e-06
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 48 3e-06
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 46 1e-05
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 42 2e-04
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 29 1.7
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 28 3.0
SPBC25D12.04 |suc22||ribonucleotide reductase small subunit Suc2... 27 4.0
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 79.0 bits (186), Expect = 1e-15
Identities = 46/135 (34%), Positives = 67/135 (49%)
Frame = +3
Query: 330 PATCSVXFEAPNLLSXFILTVAPXAXXXXXXXXXXSVIITEAYNMAPPSVKCLTKLWHPN 509
P+T S + P L+ L + P + I + Y PP VKCL K++HPN
Sbjct: 38 PSTMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPN 97
Query: 510 INVDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKD 689
I+++G +CL++LRQ W P L ++ GL LF N +DPLN EAA +KD
Sbjct: 98 IDIEGNVCLNILRQ------DWNPVLNLNSILVGLQFLFLS-PNAEDPLNKEAAADLHKD 150
Query: 690 KVQFQVKVQEYISKG 734
F +V+ + G
Sbjct: 151 PQGFASRVRTAMKGG 165
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 68.1 bits (159), Expect = 2e-12
Identities = 40/134 (29%), Positives = 62/134 (46%)
Frame = +3
Query: 330 PATCSVXFEAPNLLSXFILTVAPXAXXXXXXXXXXSVIITEAYNMAPPSVKCLTKLWHPN 509
P++CS +L + P S+ Y PP V T+++HPN
Sbjct: 18 PSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPN 77
Query: 510 INVDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKD 689
IN +G ICL +LR W+P + V+ + SL TD N DDPL E A +Y D
Sbjct: 78 INSNGSICLDILRDQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHVYKTD 130
Query: 690 KVQFQVKVQEYISK 731
+ ++++ +E+ K
Sbjct: 131 RSRYELSAREWTRK 144
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 64.1 bits (149), Expect = 4e-11
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = +3
Query: 450 EAYNMAPPSVKCLTKLWHPNINVDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFT 629
E Y PP + L+HPN+ G +CLS+L +E GW P +K ++ G+ L
Sbjct: 66 EEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILN----EEEGWKPAITIKQILLGIQDLLD 121
Query: 630 DLLNFDDPLNIEAAEMYNKDKVQFQVKVQ 716
D N P EA M+ KDKV+++ +V+
Sbjct: 122 D-PNIASPAQTEAYTMFKKDKVEYEKRVR 149
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 60.1 bits (139), Expect = 6e-10
Identities = 30/98 (30%), Positives = 58/98 (59%)
Frame = +3
Query: 438 VIITEAYNMAPPSVKCLTKLWHPNINVDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGLN 617
+ + + Y M PP+V+ LTK++HPN++ G ICLS L++ W+P +++ V+ +
Sbjct: 55 LFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKK------DWSPALQIRTVLLSIQ 108
Query: 618 SLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 731
+L N DDPL+ + A+++ +++ Q +E+ K
Sbjct: 109 ALM-GAPNPDDPLDNDVAKIWKENEPQAIANAREWTKK 145
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/99 (26%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Frame = +3
Query: 456 YNMAPPSVKCLTKLWHPNINVDGXICLSLLRQTSIDEHG-------WAPTRRLKDVVWGL 614
Y + PP +K T++WHPN++ +G +C+S+L D++G W P + ++ +
Sbjct: 65 YPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISV 124
Query: 615 NSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 731
S+ + N + P NI+AA+ + ++ +F+ +V+ + +
Sbjct: 125 ISMLSS-PNDESPANIDAAKEFRENPQEFKKRVRRLVRR 162
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 56.8 bits (131), Expect = 6e-09
Identities = 27/90 (30%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +3
Query: 456 YNMAPPSVKCLTKLWHPNINVDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDL 635
Y +PP++ + +WHPN+++ G ICL +L+ W+ ++ ++ L SL +
Sbjct: 88 YPYSPPTIIFTSPMWHPNVDMSGNICLDILKDK------WSAVYNVQTILLSLQSLLGE- 140
Query: 636 LNFDDPLNIEAAEMYNKDKVQF-QVKVQEY 722
N PLN +AAE+++KD +++ ++ +Q Y
Sbjct: 141 PNNASPLNAQAAELWSKDPIEYKRLLMQRY 170
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 54.8 bits (126), Expect = 2e-08
Identities = 27/92 (29%), Positives = 51/92 (55%)
Frame = +3
Query: 456 YNMAPPSVKCLTKLWHPNINVDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDL 635
Y PP+++ T+++HPN + +G +CL++L+Q + P+ +L+ V+ + L +
Sbjct: 66 YPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQ-----QVFKPSIKLRSVLEQILQLLRE- 119
Query: 636 LNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 731
N DDPL AE Y D+ F ++Y+ +
Sbjct: 120 PNPDDPLVASIAEQYRNDRPSFDKIARDYVEQ 151
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 54.4 bits (125), Expect = 3e-08
Identities = 27/92 (29%), Positives = 53/92 (57%)
Frame = +3
Query: 450 EAYNMAPPSVKCLTKLWHPNINVDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFT 629
E Y PP VK ++ ++HPN+ +G +CL +L ++ W+PT + ++ + SL
Sbjct: 61 EQYPNKPPLVKFVSTMFHPNVYANGELCLDIL------QNRWSPTYDVAAILTSIQSLLN 114
Query: 630 DLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYI 725
D N P N EAA+++ ++K ++ +V++ +
Sbjct: 115 D-PNNASPANAEAAQLHRENKKEYVRRVRKTV 145
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 48.0 bits (109), Expect = 3e-06
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Frame = +3
Query: 444 ITEAYNMAPPSVKCLTKLWHPNIN-VDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGLNS 620
+ E Y ++PPSV TK+ HPNI+ +G +C+ +L+ H W+P L+ + S
Sbjct: 60 VHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILK-----TH-WSPAWSLQSACLAIIS 113
Query: 621 LFTDLLNFDDPLNIEAAEMYNK-DKVQFQ--VKVQEYI-SKGK 737
L ++ + PLN++AA++ DK + V+ Y+ +KGK
Sbjct: 114 LLSN-YDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKGK 155
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 47.6 bits (108), Expect = 3e-06
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Frame = +3
Query: 456 YNMAPPSVKCLTKLWHPNINVDGXICLSLLRQTSID-------EHGWAPTRRLKDVVWGL 614
Y + PP++K + +HPN+ DG +C+S+L D W+P + ++ ++ +
Sbjct: 65 YPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSV 124
Query: 615 NSLFTDLLNFDDPLNIEAAEMYNKDKVQF 701
S+ + N + NI+A +M+ +D+ ++
Sbjct: 125 MSMLAE-PNDESGANIDACKMWREDREEY 152
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 438 VIITEAYNMAPPSVKCLTKLWHPNIN-VDGXICLSLLRQTSIDEHGWAPTRRLKDVVWGL 614
V + Y PS+ + +++HPNI+ + G +CL ++ QT W+P + ++
Sbjct: 53 VELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQT------WSPMFDMINIFEVF 106
Query: 615 NSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 731
N DPLN EAA + ++ + KV++YI++
Sbjct: 107 LPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIAR 145
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 456 YNMAPPSVKCLTKLWHPNINVD-GXICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTD 632
Y PP + TK++HPN++ G ICL +L+ W+P +K + L SL
Sbjct: 63 YPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQ------WSPVYTMKSALISLQSLLC- 115
Query: 633 LLNFDDPLNIEAAEMYNKDKVQFQVKVQEYIS 728
+P + + A++Y ++ QF +E+ S
Sbjct: 116 TPEPSNPQDAQVAQVYLQNYQQFVRTAREWTS 147
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 676 ISAASMFNGSSKLSRSVKSEFKPHTTSLSLLVG 578
+S SMF KL+R + S + TT +SLLVG
Sbjct: 579 MSLGSMFEHYRKLARRLISHYLSKTTLISLLVG 611
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 630 DLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISKG 734
DLLN+D PL I + +++F++ V+E KG
Sbjct: 108 DLLNYDTPLTISKIS-FLLQQLEFKLSVEEQYRKG 141
>SPBC25D12.04 |suc22||ribonucleotide reductase small subunit Suc22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 391
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 801 TFSFELIRTEVGCNTV*TCFIFSPLKYIP 715
TFS ELI + G +T C +FS LK+ P
Sbjct: 253 TFSNELICRDEGLHTDFACLMFSHLKHRP 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,289,753
Number of Sequences: 5004
Number of extensions: 56042
Number of successful extensions: 105
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 655427878
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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