Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_C13
         (1165 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   1.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   4.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   5.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   5.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   5.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   7.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   7.7  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 385 ILVRLMTFSKIMVRICICTKQAAIFYLNRVKNG 483
           IL  LM+ SK      IC++    FY  R +NG
Sbjct: 349 ILYNLMS-SKFRTGFIICSESNRKFYFKRARNG 380


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 889 FWFHLYLIAEYLSFHLQLILNLFLDY--LHRVYL 794
           F  HL     ++ F++ L+  L LDY  LH ++L
Sbjct: 176 FTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFL 209


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 463 LNRVKNGESYWMSL 504
           L RV+NGE+ W+S+
Sbjct: 212 LERVQNGENQWISV 225


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -3

Query: 311 SFNSLIAKYLFSPMLTFLKYL*PISCRNFLSYLYTS 204
           + + ++ ++LF+   TF+  L  +S  N LS + +S
Sbjct: 459 NLSEMVKQFLFTQKFTFVAGLATLSVLNLLSVIKSS 494


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
            transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 1120 QVCSXDTQXLMPFHDPXHKLNGLXRXAY 1037
            + C  DT+    F+DP    N     AY
Sbjct: 194  ETCQYDTESSYQFNDPQFNFNYQYNQAY 221


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +3

Query: 483 RKLLDVFNAICIVEQNLVIK 542
           R+ +++ +A+C+  +NLV K
Sbjct: 248 RRRIEIAHALCLTNKNLVSK 267


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 1120 QVCSXDTQXLMPFHDPXHKLNGLXRXAY 1037
            + C  DT+    F+DP    N     AY
Sbjct: 214  ETCQYDTESSYQFNDPQFNFNYQYNQAY 241


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 607 QIKGLNFLPENYTLPDNLELWLNMKN 684
           Q++ L  LP NY +    +LW N  N
Sbjct: 400 QVRTLYKLPPNYEIRHKFKLW-NFNN 424


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 236 CRNFLSYLYTSLEKTAPSLCNGDCLDN 156
           C++F    Y ++   +    NG+C+ N
Sbjct: 25  CKSFFGRTYNNISSISECKNNGECVIN 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,047
Number of Sequences: 336
Number of extensions: 5978
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33918913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)