BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C13
(1165 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 26 2.4
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 25 4.2
U28809-1|AAC47326.1| 140|Anopheles gambiae lysozyme protein. 24 7.4
DQ007317-1|AAY24699.1| 140|Anopheles gambiae lysozyme c-1 protein. 24 7.4
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 24 7.4
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 24 7.4
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 24 9.8
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.8 bits (54), Expect = 2.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -1
Query: 820 LDYLHRVYLHDQVNSQIYQYHCHHLTISQSQHHVF 716
++Y Y Q Q Q H H + Q QHH +
Sbjct: 117 MNYPGMGYQQQQQQQQQQQQHHQHQQLQQQQHHYY 151
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 25.0 bits (52), Expect = 4.2
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = -3
Query: 305 NSLIAKYLFSPMLTFLKYL*PISCRNFLSYLYTSLEKTAPSLCNGDCLDNIN 150
+S + +F+ L + + N Y+ +++EKT S G C +++N
Sbjct: 531 HSCVMPVIFAICFNILNWCMLVRSSNVCPYVSSTMEKTLDSQQAGSCGESLN 582
>U28809-1|AAC47326.1| 140|Anopheles gambiae lysozyme protein.
Length = 140
Score = 24.2 bits (50), Expect = 7.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 957 YSW*HDINGIKIPNIGNFF 1013
Y W + NG K+PN+ + F
Sbjct: 122 YGWKNHCNGKKLPNVSSCF 140
>DQ007317-1|AAY24699.1| 140|Anopheles gambiae lysozyme c-1 protein.
Length = 140
Score = 24.2 bits (50), Expect = 7.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 957 YSW*HDINGIKIPNIGNFF 1013
Y W + NG K+PN+ + F
Sbjct: 122 YGWKNHCNGKKLPNVSSCF 140
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 24.2 bits (50), Expect = 7.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 817 DYLHRVYLHDQVNSQIYQYHCHHLTISQSQHHVFETIQI 701
D HR LH+++ S +YQ H ++S+ + + I I
Sbjct: 110 DIKHRA-LHNEIKSLLYQKRFEHERNNRSREFMLKLIAI 147
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 24.2 bits (50), Expect = 7.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 577 NSLHQYVNQLQIKGLNFLPENYTLPD 654
++LH VNQL + LN LP T PD
Sbjct: 451 HTLHLQVNQLAFETLNTLPA--TAPD 474
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 23.8 bits (49), Expect = 9.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 706 EWSQKHGVEIDLSLDDDND 762
EW ++H V+ SL DDND
Sbjct: 740 EWFRRHKVKGFYSLIDDND 758
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,107,947
Number of Sequences: 2352
Number of extensions: 22803
Number of successful extensions: 76
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 131207787
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -