Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_C13
         (1165 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical pr...    37   0.024
U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical pr...    33   0.29 
Z69787-10|CAH65466.1|  398|Caenorhabditis elegans Hypothetical p...    30   2.7  
AL021471-2|CAA16296.2|  240|Caenorhabditis elegans Hypothetical ...    29   6.3  
AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical ...    29   6.3  

>U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical
           protein F38B6.6 protein.
          Length = 690

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 18/75 (24%), Positives = 38/75 (50%)
 Frame = -1

Query: 904 PHHDQFWFHLYLIAEYLSFHLQLILNLFLDYLHRVYLHDQVNSQIYQYHCHHLTISQSQH 725
           P H Q W +L+++ ++LS     +++L    L  V    +V+ QI   H  H   + +++
Sbjct: 565 PSHSQSWTNLFVVLDHLS-QCSQVIDLSYQALSSVPNESRVHMQIGSCHAKHSNFTAAEN 623

Query: 724 HVFETIQIFQSNLNF 680
           H+   I +  +++ F
Sbjct: 624 HIKSAIDLNPTSVLF 638


>U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical
           protein K06A1.6 protein.
          Length = 937

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 638 FSGKKFKPFICNWFTYWCKELYHLTACLVRTKLNDQ 531
           F GK+ K  I    + WCKE YHL  C  R KL ++
Sbjct: 327 FQGKEKKETIAVTCS-WCKESYHLKNCFARDKLEER 361


>Z69787-10|CAH65466.1|  398|Caenorhabditis elegans Hypothetical
           protein C44C10.11 protein.
          Length = 398

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +1

Query: 706 EWSQKHGVEIDLSLDD----DNDIGIFENLLGHVNKLCEDNQEIDLGLTVNEKRDTQQLD 873
           E  QKH  E+ +        +ND+ +  N + H+++L E+N   +L   + +K D +   
Sbjct: 282 ELKQKHIEELQMKTTQITKLENDVKLNGNFMDHISELTEENH--NLKEQLKQKTDAETKM 339

Query: 874 IGETKIDH 897
           I E K  H
Sbjct: 340 IAEMKKKH 347


>AL021471-2|CAA16296.2|  240|Caenorhabditis elegans Hypothetical
           protein Y17D7C.2 protein.
          Length = 240

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 700 RFEWSQKHGVEIDLSLDDDNDIGIFEN 780
           R+ W   H  +I++ L+DDN + +++N
Sbjct: 152 RYYWYMSHRTQIEVVLEDDNIVYVYKN 178


>AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical
           protein Y46H3D.4 protein.
          Length = 517

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
 Frame = +1

Query: 85  NTCSSETSADVKDLRHICNNIILILSRQSPLHREGAVFSRLVYKYDKKFRHDIGYRYFKK 264
           N  +++   D+  L  I N    +    + LH + + F +L      K+ + +    F+ 
Sbjct: 202 NVYTTQPPIDLSPLSDIQNISGCLNFYSTDLH-DFSFFEKLENIKSNKYAN-VDINIFES 259

Query: 265 VNIGLKRYLAIKLLKDI-ENFVGILPEKNNDYLPTRQMLEYILVRLMTFSKIMVRIC 432
            N+   R  A+K ++   +NF+  + + ++D+  T   + + L   + FSKI  +IC
Sbjct: 260 YNLTRFRMPALKTIETTRDNFIINVEKVHDDFCFTPSEMLFFLKNEVIFSKIEAKIC 316


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,336,912
Number of Sequences: 27780
Number of extensions: 532526
Number of successful extensions: 1337
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3172075232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)