Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C06
(1225 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 81 1e-14
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 81 1e-14
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 81 1e-14
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 81 1e-14
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 81 1e-14
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 81 1e-14
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 81 1e-14
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 81 1e-14
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 81 1e-14
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 81 1e-14
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 81 1e-14
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 81 1e-14
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 81 1e-14
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 81 1e-14
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 79 4e-14
AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated... 37 0.17
AL450998-13|CAH70861.1| 373|Homo sapiens SMART/HDAC1 associated... 37 0.17
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 37 0.17
AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated ... 37 0.17
AL034555-5|CAI19527.1| 373|Homo sapiens SMART/HDAC1 associated ... 37 0.17
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 37 0.17
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 37 0.17
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 149 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 208
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 209 RAAKHARGRLVLYDRPLKIEAV 230
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 159 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 218
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 219 RAAKHARGRLVLYDRPLKIEAV 240
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 149 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 208
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 209 RAAKHARGRLVLYDRPLKIEAV 230
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein
15 protein.
Length = 977
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens
cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 125 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 184
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 185 RAAKHARGRLVLYDRPLKIEAV 206
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 78.6 bits (185), Expect = 4e-14
Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +1
Query: 538 YKVLCVSALHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAEDA 702
YK L +S L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR E+A
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPENA 228
Query: 703 RDAKHAKPRIILYDKVAIVDPV 768
R AKHA+ R++LYD+ ++ V
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAV 250
>AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.17
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 RDESVRSYYKVLCVSALHPKASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRS 690
+DE +S+ + V L +++D +KD L+ E+KK+G S++I +ER + FR
Sbjct: 67 KDEPRKSFG--IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQ 124
Query: 691 AEDARDA 711
ED A
Sbjct: 125 QEDQEKA 131
>AL450998-13|CAH70861.1| 373|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 373
Score = 36.7 bits (81), Expect = 0.17
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 RDESVRSYYKVLCVSALHPKASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRS 690
+DE +S+ + V L +++D +KD L+ E+KK+G S++I +ER + FR
Sbjct: 287 KDEPRKSFG--IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQ 344
Query: 691 AEDARDA 711
ED A
Sbjct: 345 QEDQEKA 351
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 36.7 bits (81), Expect = 0.17
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 RDESVRSYYKVLCVSALHPKASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRS 690
+DE +S+ + V L +++D +KD L+ E+KK+G S++I +ER + FR
Sbjct: 328 KDEPRKSFG--IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQ 385
Query: 691 AEDARDA 711
ED A
Sbjct: 386 QEDQEKA 392
>AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.17
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 RDESVRSYYKVLCVSALHPKASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRS 690
+DE +S+ + V L +++D +KD L+ E+KK+G S++I +ER + FR
Sbjct: 67 KDEPRKSFG--IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQ 124
Query: 691 AEDARDA 711
ED A
Sbjct: 125 QEDQEKA 131
>AL034555-5|CAI19527.1| 373|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 373
Score = 36.7 bits (81), Expect = 0.17
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 RDESVRSYYKVLCVSALHPKASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRS 690
+DE +S+ + V L +++D +KD L+ E+KK+G S++I +ER + FR
Sbjct: 287 KDEPRKSFG--IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQ 344
Query: 691 AEDARDA 711
ED A
Sbjct: 345 QEDQEKA 351
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 36.7 bits (81), Expect = 0.17
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 RDESVRSYYKVLCVSALHPKASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRS 690
+DE +S+ + V L +++D +KD L+ E+KK+G S++I +ER + FR
Sbjct: 328 KDEPRKSFG--IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQ 385
Query: 691 AEDARDA 711
ED A
Sbjct: 386 QEDQEKA 392
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 36.7 bits (81), Expect = 0.17
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 RDESVRSYYKVLCVSALHPKASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRS 690
+DE +S+ + V L +++D +KD L+ E+KK+G S++I +ER + FR
Sbjct: 328 KDEPRKSFG--IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQ 385
Query: 691 AEDARDA 711
ED A
Sbjct: 386 QEDQEKA 392
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,488,580
Number of Sequences: 237096
Number of extensions: 2571593
Number of successful extensions: 5377
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5277
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17339562450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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