Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C06
(1225 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH1111... 164 2e-40
AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,... 164 2e-40
AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,... 164 2e-40
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 42 0.001
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 42 0.001
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 42 0.001
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 42 0.001
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 42 0.001
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 42 0.001
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 42 0.001
BT003485-1|AAO39488.1| 328|Drosophila melanogaster SD13756p pro... 36 0.085
AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA... 35 0.20
AY171243-1|AAO11784.1| 194|Drosophila melanogaster putative RNA... 30 7.4
AY061143-1|AAL28691.1| 194|Drosophila melanogaster LD12035p pro... 30 7.4
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P... 30 7.4
AE013599-3699|AAF47073.1| 194|Drosophila melanogaster CG18426-P... 30 7.4
M31162-1|AAA28859.1| 448|Drosophila melanogaster protein ( D.me... 29 9.8
AE014298-2877|AAF48974.1| 348|Drosophila melanogaster CG14218-P... 29 9.8
>AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH11110
protein.
Length = 793
Score = 164 bits (399), Expect = 2e-40
Identities = 86/172 (50%), Positives = 111/172 (64%), Gaps = 9/172 (5%)
Frame = +1
Query: 280 RSDRDRDRITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXX 432
R DRIT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 5 RDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPE 64
Query: 433 XXXXXXXXXXXXYVSPHRDDYVRSRDARDESVRSYYKVLCVSALHPKASDEIVKDTLYRE 612
Y SPHR+ Y+R + YKVLCVSAL PKA D+ +++TLYRE
Sbjct: 65 RMRRRLDRSPSRYGSPHREPYMRGPPPAERPAG--YKVLCVSALPPKAPDDFIEETLYRE 122
Query: 613 YKKYGDFSIKISHELDERVAYICFRSAEDARDAKHAKPRIILYDKVAIVDPV 768
YKK+GDFS++++H+LDERVAY+CFR+ EDAR+AKH KPR+I+YDK+AIV+PV
Sbjct: 123 YKKFGDFSVRLAHDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPV 174
Score = 37.9 bits (84), Expect = 0.028
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 764 LFYEPVRSEYRPRPRSITPPDYDRPYSYAWSPV 862
++ R EYRPR S++PPDY+R Y Y+ SP+
Sbjct: 174 VYKSTTRPEYRPRGHSMSPPDYER-YHYSRSPM 205
>AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,
isoform B protein.
Length = 793
Score = 164 bits (399), Expect = 2e-40
Identities = 86/172 (50%), Positives = 111/172 (64%), Gaps = 9/172 (5%)
Frame = +1
Query: 280 RSDRDRDRITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXX 432
R DRIT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 5 RDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPE 64
Query: 433 XXXXXXXXXXXXYVSPHRDDYVRSRDARDESVRSYYKVLCVSALHPKASDEIVKDTLYRE 612
Y SPHR+ Y+R + YKVLCVSAL PKA D+ +++TLYRE
Sbjct: 65 RMRRRLDRSPSRYGSPHREPYMRGPPPAERPAG--YKVLCVSALPPKAPDDFIEETLYRE 122
Query: 613 YKKYGDFSIKISHELDERVAYICFRSAEDARDAKHAKPRIILYDKVAIVDPV 768
YKK+GDFS++++H+LDERVAY+CFR+ EDAR+AKH KPR+I+YDK+AIV+PV
Sbjct: 123 YKKFGDFSVRLAHDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPV 174
Score = 37.9 bits (84), Expect = 0.028
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 764 LFYEPVRSEYRPRPRSITPPDYDRPYSYAWSPV 862
++ R EYRPR S++PPDY+R Y Y+ SP+
Sbjct: 174 VYKSTTRPEYRPRGHSMSPPDYER-YHYSRSPM 205
>AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,
isoform A protein.
Length = 793
Score = 164 bits (399), Expect = 2e-40
Identities = 86/172 (50%), Positives = 111/172 (64%), Gaps = 9/172 (5%)
Frame = +1
Query: 280 RSDRDRDRITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXX 432
R DRIT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 5 RDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPE 64
Query: 433 XXXXXXXXXXXXYVSPHRDDYVRSRDARDESVRSYYKVLCVSALHPKASDEIVKDTLYRE 612
Y SPHR+ Y+R + YKVLCVSAL PKA D+ +++TLYRE
Sbjct: 65 RMRRRLDRSPSRYGSPHREPYMRGPPPAERPAG--YKVLCVSALPPKAPDDFIEETLYRE 122
Query: 613 YKKYGDFSIKISHELDERVAYICFRSAEDARDAKHAKPRIILYDKVAIVDPV 768
YKK+GDFS++++H+LDERVAY+CFR+ EDAR+AKH KPR+I+YDK+AIV+PV
Sbjct: 123 YKKFGDFSVRLAHDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPV 174
Score = 37.9 bits (84), Expect = 0.028
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 764 LFYEPVRSEYRPRPRSITPPDYDRPYSYAWSPV 862
++ R EYRPR S++PPDY+R Y Y+ SP+
Sbjct: 174 VYKSTTRPEYRPRGHSMSPPDYER-YHYSRSPM 205
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 VSALHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAEDARDA 711
V L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D A
Sbjct: 74 VRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKA 127
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 VSALHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAEDARDA 711
V L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D A
Sbjct: 552 VRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKA 605
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 VSALHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAEDARDA 711
V L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D A
Sbjct: 558 VRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKA 611
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 VSALHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAEDARDA 711
V L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D A
Sbjct: 501 VRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKA 554
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 VSALHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAEDARDA 711
V L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D A
Sbjct: 501 VRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKA 554
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 VSALHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAEDARDA 711
V L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D A
Sbjct: 558 VRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKA 611
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 VSALHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAEDARDA 711
V L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D A
Sbjct: 558 VRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKA 611
>BT003485-1|AAO39488.1| 328|Drosophila melanogaster SD13756p
protein.
Length = 328
Score = 36.3 bits (80), Expect = 0.085
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 286 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 405
DR+ R R+++RS +D++PR +RTRSS R SS
Sbjct: 66 DRELHRERTSNRSLRRSREKDAVPRRRRTRSSPSRSSSSS 105
>AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA
protein.
Length = 463
Score = 35.1 bits (77), Expect = 0.20
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 286 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 405
DR+ R R+ +RS +D++PR +RTRSS R SS
Sbjct: 48 DRELHRERTSNRSSRRSREKDAVPRRRRTRSSPSRSSSSS 87
>AY171243-1|AAO11784.1| 194|Drosophila melanogaster putative
RNA-binding protein protein.
Length = 194
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 271 GLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRS 378
G R DR+RDR + R+ +R RD RS+R+RS
Sbjct: 48 GAGRRDRERDRDRSRSRDRERERERD-RARSRRSRS 82
>AY061143-1|AAL28691.1| 194|Drosophila melanogaster LD12035p
protein.
Length = 194
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 271 GLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRS 378
G R DR+RDR + R+ +R RD RS+R+RS
Sbjct: 48 GAGRRDRERDRDRSRSRDRERERERD-RARSRRSRS 82
>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
protein.
Length = 1377
Score = 29.9 bits (64), Expect = 7.4
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1
Query: 280 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSS 381
RSDRDR+R + R SSS S S R RSS
Sbjct: 251 RSDRDREREKERDREKIPSSSSSSSSHSNRRRSS 284
>AE013599-3699|AAF47073.1| 194|Drosophila melanogaster CG18426-PA
protein.
Length = 194
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 271 GLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRS 378
G R DR+RDR + R+ +R RD RS+R+RS
Sbjct: 48 GAGRRDRERDRDRSRSRDRERERERD-RARSRRSRS 82
>M31162-1|AAA28859.1| 448|Drosophila melanogaster protein (
D.melanogaster U1 70Ksmall nuclear ribonucleoprotein
gene, complete cds. ).
Length = 448
Score = 29.5 bits (63), Expect = 9.8
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 280 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDD 399
R DR+RDR + + RS SR S R KR S RYD+
Sbjct: 263 RRDRERDRGRGAVASSGRSRSR-SRERRKRRAGSRERYDE 301
>AE014298-2877|AAF48974.1| 348|Drosophila melanogaster CG14218-PA
protein.
Length = 348
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Frame = +2
Query: 779 VRSEYRPRPRSIT-----PPDYDRPYSYAWSP 859
VR + RPRPR T PP+YD Y Y P
Sbjct: 133 VRPQVRPRPRPTTLAPPPPPNYDYDYDYDAQP 164
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,634,157
Number of Sequences: 53049
Number of extensions: 806264
Number of successful extensions: 2610
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2591
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6519393600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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