Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_C03
         (1237 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    72   3e-11
UniRef50_Q4YGX6 Cluster: Putative uncharacterized protein; n=1; ...    35   3.8  
UniRef50_Q9TVQ2 Cluster: Putative uncharacterized protein; n=2; ...    34   6.6  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 72.1 bits (169), Expect = 3e-11
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = +1

Query: 193 IYGTGGLLTPLVAPMLXXXXXXXXXXXXXXXXXXYYGNLVAGSIVSQLTAAAMVAPTP 366
           IYGTGGLLTP+VAPML                  YYGN+VAGS++SQLT+AAM+APTP
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q4YGX6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 116

 Score = 35.1 bits (77), Expect = 3.8
 Identities = 25/75 (33%), Positives = 34/75 (45%)
 Frame = +3

Query: 141 EHGASSCISGKRGRRCCNIWHWGSVDSISGSHARFQLSGNSGRKHSRCCTSILRKFSGRQ 320
           E G+ SC++G    RC      G    ISGSH+    +      + RC TS LR  +G  
Sbjct: 12  ETGSHSCVTGNH--RC----ETGDHSCISGSHSCVTGNHICETGNHRCVTSNLRCETGSH 65

Query: 321 HCVTVDCCCHGSPHA 365
            CVT +  C    H+
Sbjct: 66  SCVTSNHRCETGDHS 80


>UniRef50_Q9TVQ2 Cluster: Putative uncharacterized protein; n=2;
            Caenorhabditis|Rep: Putative uncharacterized protein -
            Caenorhabditis elegans
          Length = 1651

 Score = 34.3 bits (75), Expect = 6.6
 Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
 Frame = +3

Query: 141  EHGASSCISGKRGRRC---CNIWHWGSVDSISGSHARFQLSGNSGRKHSRCCTSILRKFS 311
            EH   SC+SG  G +C   C   +    D ISG H   Q  G  G+K +R C   L+ + 
Sbjct: 1195 EHCEKSCVSGHYGAKCEETCECENGALCDPISG-HCSCQ-PGWRGKKCNRPC---LKGYF 1249

Query: 312  GRQHCVTVDCCCHGS 356
            GR HC +  C C  S
Sbjct: 1250 GR-HC-SQSCRCANS 1262


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,907,925
Number of Sequences: 1657284
Number of extensions: 9702798
Number of successful extensions: 22291
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22073
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 124720521772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)