Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C02
(1170 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 112 2e-24
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 112 2e-24
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 112 2e-24
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 54 1e-06
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 54 1e-06
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 54 1e-06
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 54 1e-06
AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif prote... 54 1e-06
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 54 1e-06
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 54 1e-06
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 54 1e-06
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 54 1e-06
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 54 1e-06
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 54 1e-06
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 54 1e-06
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 54 1e-06
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 54 1e-06
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 54 1e-06
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 54 1e-06
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 54 1e-06
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 54 1e-06
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 54 1e-06
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 54 1e-06
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 54 1e-06
AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protei... 54 1e-06
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 48 7e-05
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 48 7e-05
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 48 7e-05
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 47 1e-04
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 47 1e-04
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 47 1e-04
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 47 1e-04
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 47 1e-04
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 46 2e-04
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 46 2e-04
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 46 2e-04
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 46 2e-04
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 46 2e-04
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 46 2e-04
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 46 2e-04
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 46 2e-04
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 46 2e-04
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 46 2e-04
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 46 2e-04
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 45 5e-04
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 45 6e-04
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 45 6e-04
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 45 6e-04
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 44 0.001
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 44 0.001
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 44 0.001
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 43 0.002
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 43 0.002
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 43 0.002
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 43 0.002
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 43 0.002
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 42 0.003
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 42 0.003
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 42 0.003
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 42 0.003
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 42 0.003
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 42 0.003
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 42 0.003
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 42 0.004
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 42 0.006
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 42 0.006
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 42 0.006
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 42 0.006
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 42 0.006
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 42 0.006
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 42 0.006
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 42 0.006
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 42 0.006
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 42 0.006
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 42 0.006
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 42 0.006
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 42 0.006
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 42 0.006
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 42 0.006
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 42 0.006
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 42 0.006
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 42 0.006
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 42 0.006
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 42 0.006
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 42 0.006
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 41 0.008
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 41 0.008
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 41 0.008
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 41 0.008
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 41 0.008
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 41 0.008
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 41 0.008
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 41 0.010
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 41 0.010
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 41 0.010
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 41 0.010
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 40 0.013
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 40 0.013
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 40 0.013
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 40 0.013
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 40 0.013
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 40 0.013
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 40 0.013
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 40 0.013
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 40 0.013
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 40 0.013
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 40 0.013
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 40 0.013
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 40 0.013
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 40 0.017
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 40 0.017
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 40 0.017
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 40 0.017
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 40 0.017
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 40 0.017
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 40 0.017
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 40 0.017
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 40 0.017
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 40 0.017
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 40 0.017
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 40 0.017
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 40 0.017
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 40 0.017
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 40 0.017
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 40 0.017
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 40 0.017
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 40 0.017
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 40 0.017
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 40 0.017
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 40 0.023
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 40 0.023
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 40 0.023
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 40 0.023
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 39 0.030
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 39 0.030
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 39 0.030
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 39 0.030
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 39 0.030
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 39 0.030
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 39 0.030
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 39 0.030
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 39 0.030
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 39 0.030
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 39 0.030
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 39 0.030
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 39 0.030
AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein. 39 0.030
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 38 0.070
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 38 0.070
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 38 0.070
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 38 0.070
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 38 0.070
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 38 0.070
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 38 0.070
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 38 0.092
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 38 0.092
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 36 0.28
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 36 0.28
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 36 0.28
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 36 0.37
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 35 0.49
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 35 0.49
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 35 0.49
BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein. 35 0.49
X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein. 35 0.65
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 35 0.65
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 35 0.65
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 35 0.65
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 35 0.65
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 35 0.65
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 35 0.65
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 35 0.65
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 35 0.65
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 35 0.65
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 35 0.65
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 35 0.65
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 35 0.65
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 35 0.65
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 35 0.65
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 35 0.65
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 35 0.65
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 34 0.86
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 34 0.86
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 34 0.86
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 34 0.86
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 34 0.86
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 34 0.86
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 34 0.86
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 34 0.86
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 34 0.86
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 34 0.86
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 34 0.86
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 34 0.86
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 34 0.86
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 34 0.86
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 34 0.86
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 34 0.86
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 34 0.86
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 34 0.86
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 34 0.86
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 34 1.1
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 34 1.1
X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for ... 33 1.5
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 33 1.5
M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human ribonucle... 33 1.5
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 33 1.5
J04205-1|AAA51885.1| 408|Homo sapiens La protein protein. 33 1.5
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 33 1.5
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 33 1.5
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 33 1.5
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 33 1.5
BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antige... 33 1.5
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 33 1.5
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 33 1.5
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 33 1.5
BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antige... 33 1.5
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 33 1.5
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 33 1.5
BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antige... 33 1.5
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 33 1.5
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 33 1.5
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 33 1.5
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 33 1.5
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 33 1.5
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 33 1.5
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 33 1.5
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 33 1.5
AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein. 33 1.5
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 33 1.5
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 33 1.5
BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein. 33 2.0
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 33 2.0
BC034402-1|AAH34402.1| 497|Homo sapiens FLJ20273 protein protein. 33 2.0
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 33 2.0
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 33 2.0
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 33 2.0
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 33 2.0
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 33 2.0
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 33 2.0
AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens ... 33 2.0
AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein pro... 33 2.0
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 33 2.0
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 33 2.6
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 33 2.6
BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein MG... 33 2.6
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 33 2.6
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 33 2.6
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 33 2.6
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 33 2.6
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 33 2.6
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 32 3.5
EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2 ... 32 3.5
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 32 4.6
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 32 4.6
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 32 4.6
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 32 4.6
BC015463-1|AAH15463.1| 125|Homo sapiens splicing factor 3B, 14 ... 32 4.6
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 32 4.6
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 32 4.6
AF401310-1|AAK94041.1| 125|Homo sapiens pre-mRNA branch site pr... 32 4.6
AF184213-1|AAG09698.1| 125|Homo sapiens ht006 protein protein. 32 4.6
AF151868-1|AAD34105.1| 125|Homo sapiens CGI-110 protein protein. 32 4.6
AC008073-2|AAY14664.1| 125|Homo sapiens unknown protein. 32 4.6
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 32 4.6
BC037565-1|AAH37565.1| 561|Homo sapiens RAVER1 protein protein. 31 6.1
AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein. 31 6.1
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 31 8.0
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 112 bits (270), Expect = 2e-24
Identities = 52/105 (49%), Positives = 73/105 (69%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
MSRLIVKNLPN + + R+LF G +TD LK+TKDGKFR FGF+G+++EE+A A++
Sbjct: 1 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK 60
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKD 792
+F+ + I + +I V+ C GD KPRAWSK+A + K+ KD
Sbjct: 61 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKD 105
Score = 44.0 bits (99), Expect = 0.001
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL--KYTKDGKFRNFGFVGYRTEEQAIAAK 654
S+++V+N+P + +RELF GE+ V+L K T G R FGFV + T++ AK
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD---AK 888
Query: 655 EYFDGTC 675
F+ C
Sbjct: 889 RAFNALC 895
Score = 40.3 bits (90), Expect = 0.013
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQL--KYTKDGKFRN--FGFVGYRTEEQAIAAK 654
L +KNL T + L+E+F + G V + K K G + FGFV YR EQA A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791
Query: 655 EYFDGTCIRSMKIEVQ 702
+ G + K+EV+
Sbjct: 792 KQLQGHVVDGHKLEVR 807
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 112 bits (270), Expect = 2e-24
Identities = 52/105 (49%), Positives = 73/105 (69%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
MSRLIVKNLPN + + R+LF G +TD LK+TKDGKFR FGF+G+++EE+A A++
Sbjct: 1 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK 60
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKD 792
+F+ + I + +I V+ C GD KPRAWSK+A + K+ KD
Sbjct: 61 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKD 105
Score = 44.0 bits (99), Expect = 0.001
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL--KYTKDGKFRNFGFVGYRTEEQAIAAK 654
S+++V+N+P + +RELF GE+ V+L K T G R FGFV + T++ AK
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD---AK 888
Query: 655 EYFDGTC 675
F+ C
Sbjct: 889 RAFNALC 895
Score = 40.3 bits (90), Expect = 0.013
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQL--KYTKDGKFRN--FGFVGYRTEEQAIAAK 654
L +KNL T + L+E+F + G V + K K G + FGFV YR EQA A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791
Query: 655 EYFDGTCIRSMKIEVQ 702
+ G + K+EV+
Sbjct: 792 KQLQGHVVDGHKLEVR 807
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 112 bits (270), Expect = 2e-24
Identities = 52/105 (49%), Positives = 73/105 (69%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
MSRLIVKNLPN + + R+LF G +TD LK+TKDGKFR FGF+G+++EE+A A++
Sbjct: 14 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK 73
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKD 792
+F+ + I + +I V+ C GD KPRAWSK+A + K+ KD
Sbjct: 74 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKD 118
Score = 44.0 bits (99), Expect = 0.001
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL--KYTKDGKFRNFGFVGYRTEEQAIAAK 654
S+++V+N+P + +RELF GE+ V+L K T G R FGFV + T++ AK
Sbjct: 845 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD---AK 901
Query: 655 EYFDGTC 675
F+ C
Sbjct: 902 RAFNALC 908
Score = 40.3 bits (90), Expect = 0.013
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQL--KYTKDGKFRN--FGFVGYRTEEQAIAAK 654
L +KNL T + L+E+F + G V + K K G + FGFV YR EQA A
Sbjct: 745 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 804
Query: 655 EYFDGTCIRSMKIEVQ 702
+ G + K+EV+
Sbjct: 805 KQLQGHVVDGHKLEVR 820
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 183 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 241
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 242 HGTVVEGRKIEV 253
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 112 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 170
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 171 HGTVVEGRKIEV 182
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 196
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 197 HGTVVEGRKIEV 208
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 112 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 170
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 171 HGTVVEGRKIEV 182
>AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif protein
9 protein.
Length = 370
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 112 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 170
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 171 HGTVVEGRKIEV 182
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 122 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 180
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 181 HGTVVEGRKIEV 192
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 120 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 178
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 179 HGTVVEGRKIEV 190
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 113 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 171
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 172 HGTVVEGRKIEV 183
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 113 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 171
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 172 HGTVVEGRKIEV 183
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 113 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 171
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 172 HGTVVEGRKIEV 183
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 182 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 240
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 241 HGTVVEGRKIEV 252
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 118 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 176
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 177 HGTVVEGRKIEV 188
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 118 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 176
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 177 HGTVVEGRKIEV 188
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 112 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 170
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 171 HGTVVEGRKIEV 182
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 196
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 197 HGTVVEGRKIEV 208
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 196
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 197 HGTVVEGRKIEV 208
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 196
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 197 HGTVVEGRKIEV 208
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 196
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 197 HGTVVEGRKIEV 208
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 196
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 197 HGTVVEGRKIEV 208
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 98 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 156
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 157 HGTVVEGRKIEV 168
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 196
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 197 HGTVVEGRKIEV 208
>AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protein 1
isoform 4 variant protein.
Length = 303
Score = 53.6 bits (123), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + LR++FGQ G++ DV++ + + G + FGFV + A A+E
Sbjct: 159 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS-KGFGFVTFENSADADRAREKL 217
Query: 664 DGTCIRSMKIEV 699
GT + KIEV
Sbjct: 218 HGTVVEGRKIEV 229
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 48.0 bits (109), Expect = 7e-05
Identities = 30/108 (27%), Positives = 53/108 (49%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAK 654
+ +RLI++NL K + D L+ +F Q G V +V + DGK R FGFV ++ +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKAL 171
Query: 655 EYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEI 798
+ + I+ + V V K ++ S + + K H++ +
Sbjct: 172 KGMNMKEIKGRTVAVDWAVAKDKYKDTQSVSAIGEEKSHESK-HQESV 218
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 48.0 bits (109), Expect = 7e-05
Identities = 30/108 (27%), Positives = 53/108 (49%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAK 654
+ +RLI++NL K + D L+ +F Q G V +V + DGK R FGFV ++ +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKAL 171
Query: 655 EYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEI 798
+ + I+ + V V K ++ S + + K H++ +
Sbjct: 172 KGMNMKEIKGRTVAVDWAVAKDKYKDTQSVSAIGEEKSHESK-HQESV 218
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 48.0 bits (109), Expect = 7e-05
Identities = 30/108 (27%), Positives = 53/108 (49%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAK 654
+ +RLI++NL K + D L+ +F Q G V +V + DGK R FGFV ++ +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKAL 171
Query: 655 EYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEI 798
+ + I+ + V V K ++ S + + K H++ +
Sbjct: 172 KGMNMKEIKGRTVAVDWAVAKDKYKDTQSVSAIGEEKSHESK-HQESV 218
>BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 47.2 bits (107), Expect = 1e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V NL KVT + L ELF Q G V V++ KDGK + F FV ++ E A +
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLN 71
Query: 667 GTCIRSMKIEVQ 702
G + I++Q
Sbjct: 72 GIRLYGRPIKIQ 83
>BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 47.2 bits (107), Expect = 1e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V NL KVT + L ELF Q G V V++ KDGK + F FV ++ E A +
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLN 71
Query: 667 GTCIRSMKIEVQ 702
G + I++Q
Sbjct: 72 GIKLYGRPIKIQ 83
>AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
HSH49 PROTEIN. ).
Length = 267
Score = 47.2 bits (107), Expect = 1e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V NL KVT + L ELF Q G V V++ KDGK + F FV ++ E A +
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLN 71
Query: 667 GTCIRSMKIEVQ 702
G + I++Q
Sbjct: 72 GIKLYGRPIKIQ 83
>AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 47.2 bits (107), Expect = 1e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V NL KVT + L ELF Q G V V++ KDGK + F FV ++ E A +
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLN 71
Query: 667 GTCIRSMKIEVQ 702
G + I++Q
Sbjct: 72 GIKLYGRPIKIQ 83
>AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein
FLJ11153 variant protein.
Length = 155
Score = 47.2 bits (107), Expect = 1e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V NL KVT + L ELF Q G V V++ KDGK + F FV ++ E A +
Sbjct: 18 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLN 77
Query: 667 GTCIRSMKIEVQ 702
G + I++Q
Sbjct: 78 GIKLYGRPIKIQ 89
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A
Sbjct: 187 AKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANK 246
Query: 649 AKEYFDG 669
A E +G
Sbjct: 247 AVEEMNG 253
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 355 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 382
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 45.2 bits (102), Expect = 5e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+ + +KN +V + L+ELF Q G+ V++ +GK + FGFV Y E A A E
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 61
Query: 661 FDG 669
+G
Sbjct: 62 MNG 64
Score = 39.5 bits (88), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 107 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 165
Query: 667 GTCIRSMKIEV 699
G + S + V
Sbjct: 166 GRIVGSKPLYV 176
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 44.8 bits (101), Expect = 6e-04
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L+ KNLP KVT D L+E+F E+ V +KDGK + ++ ++TE A E
Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLV----SKDGKSKGIAYIEFKTEADAEKTFEEKQ 450
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPR 738
GT I I + + G + R
Sbjct: 451 GTEIDGRSISLYYTGEKGQNQDYR 474
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 44.8 bits (101), Expect = 6e-04
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L+ KNLP KVT D L+E+F E+ V +KDGK + ++ ++TE A E
Sbjct: 372 LLAKNLPYKVTQDELKEVFEDAAEIRLV----SKDGKSKGIAYIEFKTEADAEKTFEEKQ 427
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPR 738
GT I I + + G + R
Sbjct: 428 GTEIDGRSISLYYTGEKGQNQDYR 451
Score = 35.9 bits (79), Expect = 0.28
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
S+ L VK L T + L+E F G V + + G + FGFV + +EE A A
Sbjct: 545 SQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKA 602
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGD 723
AKE + I K+ + G+
Sbjct: 603 AKEAMEDGEIDGNKVTLDWAKPKGE 627
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 44.8 bits (101), Expect = 6e-04
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L+ KNLP KVT D L+E+F E+ V +KDGK + ++ ++TE A E
Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLV----SKDGKSKGIAYIEFKTEADAEKTFEEKQ 450
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPR 738
GT I I + + G + R
Sbjct: 451 GTEIDGRSISLYYTGEKGQNQDYR 474
Score = 35.9 bits (79), Expect = 0.28
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
S+ L VK L T + L+E F G V + + G + FGFV + +EE A A
Sbjct: 568 SQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKA 625
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGD 723
AKE + I K+ + G+
Sbjct: 626 AKEAMEDGEIDGNKVTLDWAKPKGE 650
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 43.6 bits (98), Expect = 0.001
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T D LR LF GEV +L K G +GFV Y T + A A
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 658 YFDGTCIRSMKIEV 699
+G ++S I+V
Sbjct: 80 TLNGLRLQSKTIKV 93
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 43.6 bits (98), Expect = 0.001
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T D LR LF GEV +L K G +GFV Y T + A A
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 658 YFDGTCIRSMKIEV 699
+G ++S I+V
Sbjct: 80 TLNGLRLQSKTIKV 93
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 43.6 bits (98), Expect = 0.001
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T D LR LF GEV +L K G +GFV Y T + A A
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 658 YFDGTCIRSMKIEV 699
+G ++S I+V
Sbjct: 80 TLNGLRLQSKTIKV 93
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 42.7 bits (96), Expect = 0.002
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+ + VKNLP V L++LF Q G++ V++ G R FGFV + E+A A +
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 661 FDG 669
+G
Sbjct: 251 MNG 253
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 42.7 bits (96), Expect = 0.002
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+ + VKNLP V L++LF Q G++ V++ G R FGFV + E+A A +
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 661 FDG 669
+G
Sbjct: 251 MNG 253
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 42.7 bits (96), Expect = 0.002
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+ + VKNLP V L++LF Q G++ V++ G R FGFV + E+A A +
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 661 FDG 669
+G
Sbjct: 251 MNG 253
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 42.7 bits (96), Expect = 0.002
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+ + VKNLP V L++LF Q G++ V++ G R FGFV + E+A A +
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 661 FDG 669
+G
Sbjct: 251 MNG 253
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 42.7 bits (96), Expect = 0.002
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L+ KNLP KVT D L+E+F E+ V +KDG + ++ ++TE A E
Sbjct: 288 LLAKNLPYKVTQDELKEVFEDAAEIRLV----SKDGNSKGIAYIEFKTEADAEKTFEEKQ 343
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPR 738
GT I I + + G + R
Sbjct: 344 GTEIDGRSISLYYTGEKGQNQDYR 367
Score = 35.9 bits (79), Expect = 0.28
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
S+ L VK L T + L+E F G V + + G + FGFV + +EE A A
Sbjct: 461 SQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKA 518
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGD 723
AKE + I K+ + G+
Sbjct: 519 AKEAMEDGEIDGNKVTLDWAKPKGE 543
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 42.3 bits (95), Expect = 0.003
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 162 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 221
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 222 AVDEMNGKELNGKQIYV 238
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
+ + +KNL + L + F G + ++ ++G + +GFV + T+E A A E
Sbjct: 73 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS-KGYGFVHFETQEAAERAIE 131
Query: 658 YFDGTCIRSMKIEV 699
+G + K+ V
Sbjct: 132 KMNGMLLNDRKVFV 145
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 42.3 bits (95), Expect = 0.003
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
+ + +KNL + L + F G + ++ ++G + +GFV + T+E A A E
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS-KGYGFVHFETQEAAERAIE 156
Query: 658 YFDGTCIRSMKIEV 699
+G + K+ V
Sbjct: 157 KMNGMLLNDRKVFV 170
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 42.3 bits (95), Expect = 0.003
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
+ + +KNL + L + F G + ++ ++G + +GFV + T+E A A E
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS-KGYGFVHFETQEAAERAIE 156
Query: 658 YFDGTCIRSMKIEV 699
+G + K+ V
Sbjct: 157 KMNGMLLNDRKVFV 170
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 42.3 bits (95), Expect = 0.003
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
+ + +KNL + L + F G + ++ ++G + +GFV + T+E A A E
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS-KGYGFVHFETQEAAERAIE 156
Query: 658 YFDGTCIRSMKIEV 699
+G + K+ V
Sbjct: 157 KMNGMLLNDRKVFV 170
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 42.3 bits (95), Expect = 0.003
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
+ + +KNL + L + F G + ++ ++G + +GFV + T+E A A E
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS-KGYGFVHFETQEAAERAIE 156
Query: 658 YFDGTCIRSMKIEV 699
+G + K+ V
Sbjct: 157 KMNGMLLNDRKVFV 170
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 42.3 bits (95), Expect = 0.003
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +1
Query: 451 VSQMH*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRT 630
+S + R S + V NL KV L+E+F G V +K KDGK R G V +
Sbjct: 223 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ 282
Query: 631 EEQAIAAKEYFDG 669
+A+ A F+G
Sbjct: 283 AIEAVQAISMFNG 295
Score = 34.7 bits (76), Expect = 0.65
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQK-GEVTDVQLKYTKDGKFRNFGFVGYRTEE 636
+R+ + N+P + +++L +K GEVT V+L +GK R G V ++ EE
Sbjct: 100 NRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEE 152
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 42.3 bits (95), Expect = 0.003
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +1
Query: 451 VSQMH*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRT 630
+S + R S + V NL KV L+E+F G V +K KDGK R G V +
Sbjct: 243 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ 302
Query: 631 EEQAIAAKEYFDG 669
+A+ A F+G
Sbjct: 303 AIEAVQAISMFNG 315
Score = 34.7 bits (76), Expect = 0.65
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQK-GEVTDVQLKYTKDGKFRNFGFVGYRTEE 636
+R+ + N+P + +++L +K GEVT V+L +GK R G V ++ EE
Sbjct: 120 NRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEE 172
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 41.9 bits (94), Expect = 0.004
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + G V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCI--RSMKIEVQTCVDLG-DEKKPR 738
A + DG + R +++++ C G + PR
Sbjct: 71 AMDAMDGAVLDGRELRVQMARCGGYGRRSRSPR 103
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 41.5 bits (93), Expect = 0.006
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLP +T + + LF + GE ++V + + R FGF+ + A AK
Sbjct: 47 RLFVGNLPTDITEEDFKRLFERYGEPSEVFIN-----RDRGFGFIRLESRTLAEIAKAEL 101
Query: 664 DGTCIRSMKIEVQ 702
DGT ++S + ++
Sbjct: 102 DGTILKSRPLRIR 114
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 41.5 bits (93), Expect = 0.006
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 41.5 bits (93), Expect = 0.006
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLP +T + + LF + GE ++V + + R FGF+ + A AK
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFIN-----RDRGFGFIRLESRTLAEIAKAEL 137
Query: 664 DGTCIRSMKIEVQ 702
DGT ++S + ++
Sbjct: 138 DGTILKSRPLRIR 150
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 41.5 bits (93), Expect = 0.006
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLP +T + + LF + GE ++V + + R FGF+ + A AK
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFIN-----RDRGFGFIRLESRTLAEIAKAEL 137
Query: 664 DGTCIRSMKIEVQ 702
DGT ++S + ++
Sbjct: 138 DGTILKSRPLRIR 150
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLP +T + + LF + GE ++V + + R FGF+ + A AK
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFIN-----RDRGFGFIRLESRTLAEIAKAEL 137
Query: 664 DGTCIRSMKIEVQ 702
DGT ++S + ++
Sbjct: 138 DGTILKSRPLRIR 150
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFV---GYRTEEQ 639
++ S LIV LP K T L+E F GEV VQ+K K G + FGFV Y T+ +
Sbjct: 101 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
Query: 640 AIAAKEYFDG 669
++ + DG
Sbjct: 161 VMSQRHMIDG 170
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLP +T + + LF + GE ++V + + R FGF+ + A AK
Sbjct: 47 RLFVGNLPTDITEEDFKRLFERYGEPSEVFIN-----RDRGFGFIRLESRTLAEIAKAEL 101
Query: 664 DGTCIRSMKIEVQ 702
DGT ++S + ++
Sbjct: 102 DGTILKSRPLRIR 114
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLP +T + + LF + GE ++V + + R FGF+ + A AK
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFIN-----RDRGFGFIRLESRTLAEIAKAEL 137
Query: 664 DGTCIRSMKIEVQ 702
DGT ++S + ++
Sbjct: 138 DGTILKSRPLRIR 150
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 41.5 bits (93), Expect = 0.006
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLP +T + + LF + GE ++V + + R FGF+ + A AK
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFIN-----RDRGFGFIRLESRTLAEIAKAEL 137
Query: 664 DGTCIRSMKIEVQ 702
DGT ++S + ++
Sbjct: 138 DGTILKSRPLRIR 150
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 41.5 bits (93), Expect = 0.006
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
++ + +KN + + L++LFG+ G V++ + GK + FGFV + E A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 649 AKEYFDGTCIRSMKIEV 699
A + +G + +I V
Sbjct: 247 AVDEMNGKELNGKQIYV 263
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.008
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + G V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCIRSMKIEVQ 702
A + DG + ++ VQ
Sbjct: 71 AMDAMDGAVLDGRELRVQ 88
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.008
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + G V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCIRSMKIEVQ 702
A + DG + ++ VQ
Sbjct: 71 AMDAMDGAVLDGRELRVQ 88
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.008
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + G V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCIRSMKIEVQ 702
A + DG + ++ VQ
Sbjct: 71 AMDAMDGAVLDGRELRVQ 88
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.008
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + G V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCIRSMKIEVQ 702
A + DG + ++ VQ
Sbjct: 71 AMDAMDGAVLDGRELRVQ 88
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.008
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + G V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCIRSMKIEVQ 702
A + DG + ++ VQ
Sbjct: 71 AMDAMDGAVLDGRELRVQ 88
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.008
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + G V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCIRSMKIEVQ 702
A + DG + ++ VQ
Sbjct: 71 AMDAMDGAVLDGRELRVQ 88
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 41.1 bits (92), Expect = 0.008
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + G V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCIRSMKIEVQ 702
A + DG + ++ VQ
Sbjct: 71 AMDAMDGAVLDGRELRVQ 88
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 46 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 104
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 105 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 132
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 46 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 104
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 105 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 132
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 75 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 133
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 134 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 161
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNL + + + LR+ F G +T ++ +DG+ + FGFV + + E+A A +
Sbjct: 7 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMN 65
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKY 753
G + S + V +E+K ++Y
Sbjct: 66 GRIVGSKPLYV-ALAQRKEERKAHLTNQY 93
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 40.3 bits (90), Expect = 0.013
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +1
Query: 436 IINIYVSQMH*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGF 615
I N + + R S + V NL KV L+E+F G V + KDGK R G
Sbjct: 29 IPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGT 88
Query: 616 VGYRTEEQAIAAKEYFDGTCIRSMKIEVQ 702
V + +A+ A F+G + + V+
Sbjct: 89 VTFEQSIEAVQAISMFNGQLLFDRPMHVK 117
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 40.3 bits (90), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + L+ LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLRLQTKTIKV 112
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 40.3 bits (90), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + L+ LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLRLQTKTIKV 112
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 40.3 bits (90), Expect = 0.013
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +1
Query: 436 IINIYVSQMH*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGF 615
I N + + R S + V NL KV L+E+F G V + KDGK R G
Sbjct: 188 IPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGT 247
Query: 616 VGYRTEEQAIAAKEYFDGTCIRSMKIEVQ 702
V + +A+ A F+G + + V+
Sbjct: 248 VTFEQSIEAVQAISMFNGQLLFDRPMHVK 276
Score = 35.5 bits (78), Expect = 0.37
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQK-GEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
R + N+P V L++L +K GEVT V+L +GK R V ++ EE A E
Sbjct: 71 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEV 130
Query: 661 FDGTCIRSMKIEVQTCVDLGDEKKPRAWSK 750
+ + ++V+ D E RA K
Sbjct: 131 LNKHSLSGRPLKVKE--DPDGEHARRAMQK 158
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 40.3 bits (90), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + L+ LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLRLQTKTIKV 112
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 40.3 bits (90), Expect = 0.013
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +1
Query: 436 IINIYVSQMH*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGF 615
I N + + R S + V NL KV L+E+F G V + KDGK R G
Sbjct: 189 IPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGT 248
Query: 616 VGYRTEEQAIAAKEYFDGTCIRSMKIEVQ 702
V + +A+ A F+G + + V+
Sbjct: 249 VTFEQSIEAVQAISMFNGQLLFDRPMHVK 277
Score = 35.5 bits (78), Expect = 0.37
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQK-GEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
R + N+P V L++L +K GEVT V+L +GK R V ++ EE A E
Sbjct: 72 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEV 131
Query: 661 FDGTCIRSMKIEVQTCVDLGDEKKPRAWSK 750
+ + ++V+ D E RA K
Sbjct: 132 LNKHSLSGRPLKVKE--DPDGEHARRAMQK 159
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 40.3 bits (90), Expect = 0.013
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +1
Query: 436 IINIYVSQMH*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGF 615
I N + + R S + V NL KV L+E+F G V + KDGK R G
Sbjct: 189 IPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGT 248
Query: 616 VGYRTEEQAIAAKEYFDGTCIRSMKIEVQ 702
V + +A+ A F+G + + V+
Sbjct: 249 VTFEQSIEAVQAISMFNGQLLFDRPMHVK 277
Score = 35.5 bits (78), Expect = 0.37
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQK-GEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
R + N+P V L++L +K GEVT V+L +GK R V ++ EE A E
Sbjct: 72 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEV 131
Query: 661 FDGTCIRSMKIEVQTCVDLGDEKKPRAWSK 750
+ + ++V+ D E RA K
Sbjct: 132 LNKHSLSGRPLKVKE--DPDGEHARRAMQK 159
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 40.3 bits (90), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + L+ LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 126
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 127 TLNGLRLQTKTIKV 140
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 40.3 bits (90), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + L+ LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLRLQTKTIKV 112
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 40.3 bits (90), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + L+ LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLRLQTKTIKV 112
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 40.3 bits (90), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + L+ LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLRLQTKTIKV 112
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 40.3 bits (90), Expect = 0.013
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +1
Query: 436 IINIYVSQMH*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGF 615
I N + + R S + V NL KV L+E+F G V + KDGK R G
Sbjct: 89 IPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGT 148
Query: 616 VGYRTEEQAIAAKEYFDGTCIRSMKIEVQ 702
V + +A+ A F+G + + V+
Sbjct: 149 VTFEQSIEAVQAISMFNGQLLFDRPMHVK 177
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 40.3 bits (90), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + L+ LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 47 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 106
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 107 TLNGLRLQTKTIKV 120
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 39.9 bits (89), Expect = 0.017
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL VT + L + F + G++ V+ K +++ FV + A+ A + +
Sbjct: 305 LFVRNLATTVTEEILEKSFSEFGKLERVK-------KLKDYAFVHFEDRGAAVKAMDEMN 357
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYK 777
G I +IE+ ++K R ++ AS STAY+
Sbjct: 358 GKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYE 394
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 39.9 bits (89), Expect = 0.017
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL VT + L + F + G++ V+ K +++ FV + A+ A + +
Sbjct: 323 LFVRNLATTVTEEILEKSFSEFGKLERVK-------KLKDYAFVHFEDRGAAVKAMDEMN 375
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYK 777
G I +IE+ ++K R ++ AS STAY+
Sbjct: 376 GKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYE 412
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 39.9 bits (89), Expect = 0.017
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL VT + L + F + G++ V+ K +++ FV + A+ A + +
Sbjct: 317 LFVRNLATTVTEEILEKSFSEFGKLERVK-------KLKDYAFVHFEDRGAAVKAMDEMN 369
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYK 777
G I +IE+ ++K R ++ AS STAY+
Sbjct: 370 GKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYE 406
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 39.9 bits (89), Expect = 0.017
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+ + VKN+ + + + L+ELF + G V++ GK + FGFV Y T E A
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAA 252
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.017
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL VT + L + F + G++ V+ K +++ FV + A+ A + +
Sbjct: 346 LFVRNLATTVTEEILEKSFSEFGKLERVK-------KLKDYAFVHFEDRGAAVKAMDEMN 398
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYK 777
G I +IE+ ++K R ++ AS STAY+
Sbjct: 399 GKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYE 435
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 63 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 122
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 123 TLNGLRLQTKTIKV 136
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 39.9 bits (89), Expect = 0.017
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+ + VKN+ + + + L+ELF + G V++ GK + FGFV Y T E A
Sbjct: 35 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAA 88
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 39.9 bits (89), Expect = 0.017
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+ + VKN+ + + + L+ELF + G V++ GK + FGFV Y T E A
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAA 252
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 51 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 110
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 111 TLNGLRLQTKTIKV 124
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 51 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 110
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 111 TLNGLRLQTKTIKV 124
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 63 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 122
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 123 TLNGLRLQTKTIKV 136
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 51 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 110
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 111 TLNGLRLQTKTIKV 124
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 51 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 110
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 111 TLNGLRLQTKTIKV 124
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 63 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 122
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 123 TLNGLRLQTKTIKV 136
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T + R LFG GE+ +L K G+ +GFV Y + A A
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 106 TLNGLRLQTKTIKV 119
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 39.9 bits (89), Expect = 0.017
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+ + VKN+ + + + L+ELF + G V++ GK + FGFV Y T E A
Sbjct: 184 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAA 237
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 39.9 bits (89), Expect = 0.017
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL VT + L + F + G++ V+ K +++ FV + A+ A + +
Sbjct: 346 LFVRNLATTVTEEILEKSFSEFGKLERVK-------KLKDYAFVHFEDRGAAVKAMDEMN 398
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYK 777
G I +IE+ ++K R ++ AS STAY+
Sbjct: 399 GKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYE 435
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 39.9 bits (89), Expect = 0.017
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL VT + L + F + G++ V+ K +++ FV + A+ A + +
Sbjct: 343 LFVRNLATTVTEEILEKSFSEFGKLERVK-------KLKDYAFVHFEDRGAAVKAMDEMN 395
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYK 777
G I +IE+ ++K R ++ AS STAY+
Sbjct: 396 GKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYE 432
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 39.9 bits (89), Expect = 0.017
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+ + VKN+ + + + L+ELF + G V++ GK + FGFV Y T E A
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAA 252
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 39.9 bits (89), Expect = 0.017
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +1
Query: 451 VSQMH*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRT 630
+S + R S + V NL KV L+E+F G V K KDGK R G V +
Sbjct: 170 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKAGSYKEDKDGKSRGMGTVTFEQ 229
Query: 631 EEQAIAAKEYFDG 669
+A+ A F+G
Sbjct: 230 AIEAVQAISMFNG 242
Score = 35.1 bits (77), Expect = 0.49
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQK-GEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
+R+ + N+P + +++L +K GEVT V+L +GK R G V ++ EE A E
Sbjct: 47 NRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALE 106
Query: 658 YFDGTCIRSMKIEVQ 702
+ + ++ ++
Sbjct: 107 TMNKYDLSGRRVNIK 121
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 39.9 bits (89), Expect = 0.017
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL VT + L + F + G++ V+ K +++ FV + A+ A + +
Sbjct: 343 LFVRNLATTVTEEILEKSFSEFGKLERVK-------KLKDYAFVHFEDRGAAVKAMDEMN 395
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYK 777
G I +IE+ ++K R ++ AS STAY+
Sbjct: 396 GKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYE 432
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 39.5 bits (88), Expect = 0.023
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
S + V NL KV L+E+F G V + KDGK R G V + +A+ A
Sbjct: 165 STVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISM 224
Query: 661 FDGTCIRSMKIEVQ 702
F+G + + V+
Sbjct: 225 FNGQLLFDRPMHVK 238
Score = 35.5 bits (78), Expect = 0.37
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQK-GEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
R + N+P V L++L +K GEVT V+L +GK R V ++ EE A E
Sbjct: 72 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEV 131
Query: 661 FDGTCIRSMKIEVQTCVDLGDEKKPRAWSK 750
+ + ++V+ D E RA K
Sbjct: 132 LNKHSLSGRPLKVKE--DPDGEHARRAMQK 159
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 39.5 bits (88), Expect = 0.023
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T D + LFG G++ +L K G+ +GFV Y A A
Sbjct: 30 TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAIN 89
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 90 TLNGLKLQTKTIKV 103
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 39.5 bits (88), Expect = 0.023
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T D + LFG G++ +L K G+ +GFV Y A A
Sbjct: 39 TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLKLQTKTIKV 112
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 39.5 bits (88), Expect = 0.023
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
S + V NL KV L+E+F G V + KDGK R G V + +A+ A
Sbjct: 165 STVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISM 224
Query: 661 FDGTCIRSMKIEVQ 702
F+G + + V+
Sbjct: 225 FNGQLLFDRPMHVK 238
Score = 35.1 bits (77), Expect = 0.49
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQK-GEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
R + N+P V L++L +K GEVT V+L +GK R V ++ EE A E
Sbjct: 72 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEV 131
Query: 661 FDGTCIRSMKIEVQ 702
+ + ++V+
Sbjct: 132 LNKHSLSGRPLKVK 145
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 39.1 bits (87), Expect = 0.030
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T D + LFG G++ +L K G+ +GFV Y A A
Sbjct: 39 TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDADKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLKLQTKTIKV 112
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
SRL V NLP +T + +R+LF + G+ +V + K + FGF+ T A AK
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVE 128
Query: 661 FDGTCIRSMKIEVQ 702
D +R ++ V+
Sbjct: 129 LDNMPLRGKQLRVR 142
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 39.1 bits (87), Expect = 0.030
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LIV LP +T D + LFG G++ +L K G+ +GFV Y A A
Sbjct: 39 TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDADKAIN 98
Query: 658 YFDGTCIRSMKIEV 699
+G +++ I+V
Sbjct: 99 TLNGLKLQTKTIKV 112
>AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein.
Length = 281
Score = 39.1 bits (87), Expect = 0.030
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
+ V NL +V + L ELF Q G +T V + ++GK ++FGFV ++ E A +
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLN 71
Query: 667 GTCIRSMKIEVQ 702
G + I VQ
Sbjct: 72 GIRLYGRPINVQ 83
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.070
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQL---KYTKDGKFRNFGFVGYRTEEQAIA 648
M+ L V NL + + D LR +F + V DV + +YTK+ R F FV + + A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKES--RGFAFVRFHDKRDAED 70
Query: 649 AKEYFDGTCIRSMKIEVQ 702
A + DG + ++ VQ
Sbjct: 71 AMDAMDGAVLDGRELRVQ 88
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 37.9 bits (84), Expect = 0.070
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+R+ V + K LR+ F Q G V +V++ + G + +GFV + T+E A +
Sbjct: 33 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQE 92
Query: 661 FDGTCIRSMKIEVQTCV---DLGDEKK---PRAWSKYASDSTAY 774
+ + K+ + + +G + P A + Y + ST Y
Sbjct: 93 AEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGY 136
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 37.9 bits (84), Expect = 0.070
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+R+ V + K LR+ F Q G V +V++ + G + +GFV + T+E A +
Sbjct: 39 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQE 98
Query: 661 FDGTCIRSMKIEVQTCV---DLGDEKK---PRAWSKYASDSTAY 774
+ + K+ + + +G + P A + Y + ST Y
Sbjct: 99 AEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGY 142
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 37.9 bits (84), Expect = 0.070
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+R+ V + K LR+ F Q G V +V++ + G + +GFV + T+E A +
Sbjct: 39 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQE 98
Query: 661 FDGTCIRSMKIEVQTCV---DLGDEKK---PRAWSKYASDSTAY 774
+ + K+ + + +G + P A + Y + ST Y
Sbjct: 99 AEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGY 142
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 37.9 bits (84), Expect = 0.070
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+R+ V + K LR+ F Q G V +V++ + G + +GFV + T+E A +
Sbjct: 33 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQE 92
Query: 661 FDGTCIRSMKIEVQTCV---DLGDEKK---PRAWSKYASDSTAY 774
+ + K+ + + +G + P A + Y + ST Y
Sbjct: 93 AEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGY 136
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 37.9 bits (84), Expect = 0.070
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+R+ V + K LR+ F Q G V +V++ + G + +GFV + T+E A +
Sbjct: 33 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQE 92
Query: 661 FDGTCIRSMKIEVQTCV---DLGDEKK---PRAWSKYASDSTAY 774
+ + K+ + + +G + P A + Y + ST Y
Sbjct: 93 AEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGY 136
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 37.9 bits (84), Expect = 0.070
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+R+ V + K LR+ F Q G V +V++ + G + +GFV + T+E A +
Sbjct: 33 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQE 92
Query: 661 FDGTCIRSMKIEVQTCV---DLGDEKK---PRAWSKYASDSTAY 774
+ + K+ + + +G + P A + Y + ST Y
Sbjct: 93 AEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGY 136
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 37.5 bits (83), Expect = 0.092
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
+L + L + L+ +FG+ G +++V L + K R F F+ + A A +
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68
Query: 664 DGTCIRSMKIEVQTC----VDLGDEKKPRAWSKYASDS 765
+GT + I+V+ G ++P A S+ S S
Sbjct: 69 NGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.092
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
+L + L + L+ +FG+ G +++V L + K R F F+ + A A +
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68
Query: 664 DGTCIRSMKIEVQTC----VDLGDEKKPRAWSKYASDS 765
+GT + I+V+ G ++P A S+ S S
Sbjct: 69 NGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.28
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
S+ L VK L T + L+E F G V + + G + FGFV + +EE A A
Sbjct: 340 SQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKA 397
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGD 723
AKE + I K+ + G+
Sbjct: 398 AKEAMEDGEIDGNKVTLDWAKPKGE 422
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.28
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
S+ L VK L T + L+E F G V + + G + FGFV + +EE A A
Sbjct: 340 SQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKA 397
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGD 723
AKE + I K+ + G+
Sbjct: 398 AKEAMEDGEIDGNKVTLDWAKPKGE 422
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.28
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
S+ L VK L T + L+E F G V + + G + FGFV + +EE A A
Sbjct: 340 SQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKA 397
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGD 723
AKE + I K+ + G+
Sbjct: 398 AKEAMEDGEIDGNKVTLDWAKPKGE 422
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 35.5 bits (78), Expect = 0.37
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKD-GKFRNFGFVGYRTEEQAIAAKEYFD 666
V+ LP V + +FG+ G V + + + K G + F FV + T+EQA A E+ +
Sbjct: 129 VELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLN 187
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 35.1 bits (77), Expect = 0.49
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
+L + L + L+ +FG+ G +++V L + K R F F+ + A A +
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68
Query: 664 DGTCIRSMKIEVQTC----VDLGDEKKPRAWSKYASDS 765
+G + I+V+ G ++P A S+ S S
Sbjct: 69 NGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 35.1 bits (77), Expect = 0.49
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
+L + L + L+ +FG+ G +++V L + K R F F+ + A A +
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68
Query: 664 DGTCIRSMKIEVQTC----VDLGDEKKPRAWSKYASDS 765
+G + I+V+ G ++P A S+ S S
Sbjct: 69 NGKSLHGKAIKVEQAQKPSFQSGGRRRPPASSRNRSPS 106
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 35.1 bits (77), Expect = 0.49
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
+L + L + L+ +FG+ G +++V L + K R F F+ + A A +
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68
Query: 664 DGTCIRSMKIEVQTC----VDLGDEKKPRAWSKYASDS 765
+G + I+V+ G ++P A S+ S S
Sbjct: 69 NGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106
>BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein.
Length = 606
Score = 35.1 bits (77), Expect = 0.49
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
R +++++ LP VT + +L ++D +LKY K++ FV EQA AA
Sbjct: 56 RNRRKILIRGLPGDVTNQEVHDL------LSDYELKYCFVDKYKGTAFVTLLNGEQAEAA 109
Query: 652 KEYFDGTCIRSMKIEVQ 702
F + +R ++ VQ
Sbjct: 110 INAFHQSRLRERELSVQ 126
Score = 31.5 bits (68), Expect = 6.1
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +1
Query: 487 LIVKNLPNKVT-VDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
L V LP VD L T QL +DG+ + F + Y T E A A++
Sbjct: 223 LCVDRLPPGFNDVDALCRALSAVHSPTFCQLACGQDGQLKGFAVLEYETAEMAEEAQQQA 282
Query: 664 DGTCIRSMKIEVQTC 708
DG + + V C
Sbjct: 283 DGLSLGGSHLRVSFC 297
>X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein.
Length = 296
Score = 34.7 bits (76), Expect = 0.65
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
L +K P T+D ++E KG+V ++Q++ T F+ FV + + E A
Sbjct: 1 LYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESA 52
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.65
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
++ +L + L + T D LRE F + G +TD V ++ + + R FGFV Y E+ AA
Sbjct: 33 QLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 92
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.65
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
++ +L + L + T D LRE F + G +TD V ++ + + R FGFV Y E+ AA
Sbjct: 33 QLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 92
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 34.7 bits (76), Expect = 0.65
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKF-RNFGFVGYRTEEQAIAAK 654
M L V NL + + D LR +F + G V DV + K R F FV + A A+
Sbjct: 13 MITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAE 72
Query: 655 EYFDGTCIRSMKIEVQ 702
DG + ++ VQ
Sbjct: 73 AAMDGAELDGRELRVQ 88
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.65
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
++ +L + L + T D LRE F + G +TD V ++ + + R FGFV Y E+ AA
Sbjct: 33 QLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 92
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 98 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 155
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 34 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 91
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 34.7 bits (76), Expect = 0.65
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKF-RNFGFVGYRTEEQAIAAK 654
M L V NL + + D LR +F + G V DV + K R F FV + A A+
Sbjct: 3 MITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAE 62
Query: 655 EYFDGTCIRSMKIEVQ 702
DG + ++ VQ
Sbjct: 63 AAMDGAELDGRELRVQ 78
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.65
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKF-RNFGFVGYRTEEQAIAAK 654
M L V NL + + D LR +F + G V DV + K R F FV + A A+
Sbjct: 13 MITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAE 72
Query: 655 EYFDGTCIRSMKIEVQ 702
DG + ++ VQ
Sbjct: 73 AAMDGAELDGRELRVQ 88
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.65
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
++ +L + L + T D LRE F + G +TD V ++ + + R FGFV Y E+ AA
Sbjct: 33 QLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 92
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 34.7 bits (76), Expect = 0.65
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 529 LRELFGQKGEVTDVQLKYTKDGK-FRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEV 699
LRE+F + G + DV + Y + + R F FV + + A AKE +G + +I V
Sbjct: 122 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 179
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.86
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-MKAKEGRNVYSSSRYDDYD 114
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKE 657
+ + +KNL + L + F G + ++ ++G + +GFV + T+E A A E
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS-KGYGFVHFETQEAAERAIE 156
Query: 658 YFDGTCIRSMKIEV 699
+G + K+ V
Sbjct: 157 KMNGMLLNDRKVFV 170
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 33.9 bits (74), Expect = 1.1
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLK---YTKDGKFRNFGFVGYRTEEQAIAAKE 657
L V+N+ + + LR FG+ G + DV + YT+ + R F +V + A A
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR--RPRGFAYVQFEDVRDAEDALH 69
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEID 801
D I +IE+Q GD K P K Y D+ D
Sbjct: 70 NLDRKWICGRQIEIQFA--QGDRKTPNQ-IKAKEGRNVYSSSRYDDYD 114
>X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for
ribonucleoprotein SS-B/La. ).
Length = 408
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+K P T+D ++E KG+V ++Q++ T F+ FV + + E A
Sbjct: 115 IKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESA 164
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 160 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 219
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 220 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 248
>M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human
ribonucleoprotein (La) mRNA, 3' end. ).
Length = 355
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+K P T+D ++E KG+V ++Q++ T F+ FV + + E A
Sbjct: 62 IKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESA 111
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.5
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R RLIV+NL ++ + L++ Q GEVT G+ +N G + + +
Sbjct: 100 TRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD---AHKGR-KNEGVIEFVSYSDMKR 155
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDS 765
A E DGT + KI + D ++ R++S+ S S
Sbjct: 156 ALEKLDGTEVNGRKIRL--VEDKPGSRRRRSYSRSRSHS 192
>J04205-1|AAA51885.1| 408|Homo sapiens La protein protein.
Length = 408
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+K P T+D ++E KG+V ++Q++ T F+ FV + + E A
Sbjct: 115 IKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESA 164
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 241 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 269
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 90 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 149
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 150 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 178
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 241 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 269
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 93 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 152
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 153 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 181
>BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+K P T+D ++E KG+V ++Q++ T F+ FV + + E A
Sbjct: 115 IKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESA 164
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.5
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R RLIV+NL ++ + L++ Q GEVT G+ +N G + + +
Sbjct: 100 TRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD---AHKGR-KNEGVIEFVSYSDMKR 155
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDS 765
A E DGT + KI + D ++ R++S+ S S
Sbjct: 156 ALEKLDGTEVNGRKIRL--VEDKPGSRRRRSYSRSRSHS 192
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 241 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 269
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 241 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 269
>BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+K P T+D ++E KG+V ++Q++ T F+ FV + + E A
Sbjct: 115 IKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESA 164
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.5
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R RLIV+NL ++ + L++ Q GEVT G+ +N G + + +
Sbjct: 100 TRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD---AHKGR-KNEGVIEFVSYSDMKR 155
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDS 765
A E DGT + KI + D ++ R++S+ S S
Sbjct: 156 ALEKLDGTEVNGRKIRL--VEDKPGSRRRRSYSRSRSHS 192
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 241 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 269
>BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+K P T+D ++E KG+V ++Q++ T F+ FV + + E A
Sbjct: 115 IKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESA 164
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.5
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R RLIV+NL ++ + L++ Q GEVT G+ +N G + + +
Sbjct: 100 TRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD---AHKGR-KNEGVIEFVSYSDMKR 155
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDS 765
A E DGT + KI + D ++ R++S+ S S
Sbjct: 156 ALEKLDGTEVNGRKIRL--VEDKPGSRRRRSYSRSRSHS 192
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.5
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R RLIV+NL ++ + L++ Q GEVT G+ +N G + + +
Sbjct: 100 TRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD---AHKGR-KNEGVIEFVSYSDMKR 155
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDS 765
A E DGT + KI + D ++ R++S+ S S
Sbjct: 156 ALEKLDGTEVNGRKIRL--VEDKPGSRRRRSYSRSRSHS 192
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 33.5 bits (73), Expect = 1.5
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R RLIV+NL ++ + L++ Q GEVT G+ +N G + + +
Sbjct: 100 TRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD---AHKGR-KNEGVIEFVSYSDMKR 155
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDS 765
A E DGT + KI + D ++ R++S+ S S
Sbjct: 156 ALEKLDGTEVNGRKIRL--VEDKPGSRRRRSYSRSRSHS 192
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 173 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 232
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 233 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 261
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 162 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 221
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 222 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 250
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 241 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 269
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 241 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 269
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE--QAIA 648
+ ++ V L + +RE FG GEV ++L K K R F F+ ++ EE + I
Sbjct: 181 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAW 744
K+Y + + K E++ + ++ + W
Sbjct: 241 EKKYHN---VGLSKCEIKVAMSKEQYQQQQQW 269
>AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein.
Length = 408
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+K P T+D ++E KG+V ++Q++ T F+ FV + + E A
Sbjct: 115 IKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESA 164
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 33.5 bits (73), Expect = 1.5
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R RLIV+NL ++ + L++ Q GEVT G+ +N G + + +
Sbjct: 100 TRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD---AHKGR-KNEGVIEFVSYSDMKR 155
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDS 765
A E DGT + KI + D ++ R++S+ S S
Sbjct: 156 ALEKLDGTEVNGRKIRL--VEDKPGSRRRRSYSRSRSHS 192
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 33.5 bits (73), Expect = 1.5
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R RLIV+NL ++ + L++ Q GEVT G+ +N G + + +
Sbjct: 25 TRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD---AHKGR-KNEGVIEFVSYSDMKR 80
Query: 649 AKEYFDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDS 765
A E DGT + KI + D ++ R++S+ S S
Sbjct: 81 ALEKLDGTEVNGRKIRL--VEDKPGSRRRRSYSRSRSHS 117
>BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein.
Length = 593
Score = 33.1 bits (72), Expect = 2.0
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL + T D +++ FGQ ++K K R++ FV + + E A+ A +
Sbjct: 248 LYVRNLMIETTEDTIKKSFGQFNPGCVERVK-----KIRDYAFVHFTSREDAVHAMNNLN 302
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPR 738
GT + +EV + E+ R
Sbjct: 303 GTELEGSCLEVTLAKPVDKEQYSR 326
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE 636
+ ++ V L + T + +RE FG+ GE+ ++L K K R F F+ ++ EE
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 206
>BC034402-1|AAH34402.1| 497|Homo sapiens FLJ20273 protein protein.
Length = 497
Score = 33.1 bits (72), Expect = 2.0
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L V+NL + T D +++ FGQ ++K K R++ FV + + E A+ A +
Sbjct: 248 LYVRNLMIETTEDTIKKSFGQFNPGCVERVK-----KIRDYAFVHFTSREDAVHAMNNLN 302
Query: 667 GTCIRSMKIEVQTCVDLGDEKKPR 738
GT + +EV + E+ R
Sbjct: 303 GTELEGSCLEVTLAKPVDKEQYSR 326
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE 636
+ ++ V L + T + +RE FG+ GE+ ++L K K R F F+ ++ EE
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 206
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE 636
+ ++ V L + T + +RE FG+ GE+ ++L K K R F F+ ++ EE
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 206
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE 636
+ ++ V L + T + +RE FG+ GE+ ++L K K R F F+ ++ EE
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 206
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE 636
+ ++ V L + T + +RE FG+ GE+ ++L K K R F F+ ++ EE
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 206
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE 636
+ ++ V L + T + +RE FG+ GE+ ++L K K R F F+ ++ EE
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 206
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEE 636
+ ++ V L + T + +RE FG+ GE+ ++L K K R F F+ ++ EE
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,297,076
Number of Sequences: 237096
Number of extensions: 2242134
Number of successful extensions: 3439
Number of sequences better than 10.0: 279
Number of HSP's better than 10.0 without gapping: 3245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3405
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16348730310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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