Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_C02
(1170 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 111 1e-24
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 48 1e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 48 1e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 46 7e-05
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 44 2e-04
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 44 3e-04
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 43 4e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 43 4e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 42 8e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 42 8e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 42 8e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 42 0.001
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 42 0.001
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 42 0.001
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 42 0.001
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 41 0.001
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 41 0.001
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 41 0.001
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 0.002
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 41 0.002
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 39 0.008
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.014
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 38 0.018
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 38 0.018
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 37 0.024
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 37 0.024
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 37 0.024
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 37 0.024
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 37 0.024
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 37 0.024
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 37 0.024
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 36 0.073
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 36 0.073
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 35 0.096
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 35 0.13
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 35 0.13
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 35 0.13
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 34 0.17
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 33 0.51
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 32 0.90
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 31 2.1
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 31 2.1
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 31 2.1
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical ... 30 3.6
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 29 6.3
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 29 8.4
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 111 bits (266), Expect = 1e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
+RLIVKNLP+ T LR+ F + G+++D LKYTK+GKFR F FVG+ E A A
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 661 FDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDE 795
+ T S K+ V+ C GD KPRAWSKYA DS+AYK+ H ++
Sbjct: 63 SNQTFFNSKKLTVEECRPFGDANKPRAWSKYAKDSSAYKRTHGEK 107
Score = 43.2 bits (97), Expect = 4e-04
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKY-TKDGKFRNFGFVGYRTEEQAIAAKEY 660
RL ++NLP D L+ LF + GEV++VQ+ K G + F V + E A+AA
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 661 FDGTCIRSMKIEVQTCVDLGDEKKPR 738
DG + + + GDEK+ +
Sbjct: 340 LDGYVFKGRMMHILP----GDEKRTK 361
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 48.0 bits (109), Expect = 1e-05
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P K L +F + G V DV++ + + G + FGFV + + A A+ F
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGS-KGFGFVTMQNPDDADRARAEF 159
Query: 664 DGTCIRSMKIEVQTCVDLGDEKKPR 738
+GT I ++EV KK +
Sbjct: 160 NGTTIEGRRVEVNLATQRVHNKKAK 184
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 48.0 bits (109), Expect = 1e-05
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P K L +F + G V DV++ + + G + FGFV + + A A+ F
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGS-KGFGFVTMQNPDDADRARAEF 159
Query: 664 DGTCIRSMKIEVQTCVDLGDEKKPR 738
+GT I ++EV KK +
Sbjct: 160 NGTTIEGRRVEVNLATQRVHNKKAK 184
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 45.6 bits (103), Expect = 7e-05
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKE 657
+ LI+ LP +T + +R LF GE+ +L K G+ +GFV Y EE A+ A
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 658 YFDGTCIRSMKIEVQTCVDLGDEKK 732
F+G +++ I+V D+ K
Sbjct: 102 SFNGLRLQNKTIKVSYARPSNDQIK 126
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 44.4 bits (100), Expect = 2e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLPN+V L+ELF G++ + L GK F F+ T A +AKE
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL----SGK--GFAFLRLDTRAHAESAKEAI 170
Query: 664 DGTCIRSMKIEVQTCV 711
DG I ++ V+ V
Sbjct: 171 DGRIIHGRQVRVRFAV 186
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 44.4 bits (100), Expect = 2e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V NLPN+V L+ELF G++ + L GK F F+ T A +AKE
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL----SGK--GFAFLRLDTRAHAESAKEAI 170
Query: 664 DGTCIRSMKIEVQTCV 711
DG I ++ V+ V
Sbjct: 171 DGRIIHGRQVRVRFAV 186
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
S++ V+N+ + T D L+ LF + G VT V+ KDGK + FV + TE A
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVAS 742
Query: 661 FDGTCIRSMKIEV 699
D +R ++EV
Sbjct: 743 GDKLMLRERELEV 755
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 43.6 bits (98), Expect = 3e-04
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAAKEYFDG 669
V NL + T LR++FG+ GE+ L Y + G R FGF+ + E A AA++
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 670 TCIRSMKIEV 699
T + KI V
Sbjct: 140 TDLDGHKIRV 149
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 43.2 bits (97), Expect = 4e-04
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + L+ +F + G V+DV++ + + G + FGFV + A A++
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGS-KGFGFVTMERPQDAERARQEL 212
Query: 664 DGTCIRSMKIEVQTCVDLGDEKK 732
G+ I KIEV KK
Sbjct: 213 HGSMIEGRKIEVNCATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 43.2 bits (97), Expect = 4e-04
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
RL V N+P + L+ +F + G V+DV++ + + G + FGFV + A A++
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGS-KGFGFVTMERPQDAERARQEL 212
Query: 664 DGTCIRSMKIEVQTCVDLGDEKK 732
G+ I KIEV KK
Sbjct: 213 HGSMIEGRKIEVNCATARVHSKK 235
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 41.9 bits (94), Expect = 8e-04
Identities = 20/80 (25%), Positives = 41/80 (51%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+++ + + VKN + + L +LF + G +T ++ T +GK + FGFV + E+A
Sbjct: 149 AKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAET 207
Query: 649 AKEYFDGTCIRSMKIEVQTC 708
A + + I +++ C
Sbjct: 208 AVQALHDSTIEGTDLKLHVC 227
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
L VKNL V D L++ F G +T ++ ++G+ + FGFV + E+A +A
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSA 313
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 41.9 bits (94), Expect = 8e-04
Identities = 20/80 (25%), Positives = 41/80 (51%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+++ + + VKN + + L +LF + G +T ++ T +GK + FGFV + E+A
Sbjct: 146 AKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAET 204
Query: 649 AKEYFDGTCIRSMKIEVQTC 708
A + + I +++ C
Sbjct: 205 AVQALHDSTIEGTDLKLHVC 224
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
L VKNL V D L++ F G +T ++ ++G+ + FGFV + E+A +A
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSA 310
Score = 35.9 bits (79), Expect = 0.055
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
+ +KNL + + + F G + ++ +DG + +GFV + TEE A A + +
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 667 GTCIRSMKIEV 699
G + K+ V
Sbjct: 119 GMLLAGKKVFV 129
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 41.9 bits (94), Expect = 8e-04
Identities = 20/80 (25%), Positives = 41/80 (51%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+++ + + VKN + + L +LF + G +T ++ T +GK + FGFV + E+A
Sbjct: 209 AKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAET 267
Query: 649 AKEYFDGTCIRSMKIEVQTC 708
A + + I +++ C
Sbjct: 268 AVQALHDSTIEGTDLKLHVC 287
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
L VKNL V D L++ F G +T ++ ++G+ + FGFV + E+A +A
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSA 373
Score = 35.9 bits (79), Expect = 0.055
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
+ +KNL + + + F G + ++ +DG + +GFV + TEE A A + +
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 667 GTCIRSMKIEV 699
G + K+ V
Sbjct: 182 GMLLAGKKVFV 192
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 41.5 bits (93), Expect = 0.001
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQ-LKYTKDGKFRNFGFVGYRTEEQAIAA 651
R + V +L ++V LRE F G+V+D + ++ T K + +GFV Y E+A A
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 652 KEYFDGTCIRSMKIEVQTCV-DLGDEKKPRAWSKYASD 762
E +G + I GD++KP +++ + D
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 117
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.001
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQ-LKYTKDGKFRNFGFVGYRTEEQAIAA 651
R + V +L ++V LRE F G+V+D + ++ T K + +GFV Y E+A A
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 652 KEYFDGTCIRSMKIEVQTCV-DLGDEKKPRAWSKYASD 762
E +G + I GD++KP +++ + D
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 127
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 41.5 bits (93), Expect = 0.001
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQ-LKYTKDGKFRNFGFVGYRTEEQAIAA 651
R + V +L ++V LRE F G+V+D + ++ T K + +GFV Y E+A A
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 652 KEYFDGTCIRSMKIEVQTCV-DLGDEKKPRAWSKYASD 762
E +G + I GD++KP +++ + D
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 230
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 41.5 bits (93), Expect = 0.001
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQ-LKYTKDGKFRNFGFVGYRTEEQAIAA 651
R + V +L ++V LRE F G+V+D + ++ T K + +GFV Y E+A A
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 652 KEYFDGTCIRSMKIEVQTCV-DLGDEKKPRAWSKYASD 762
E +G + I GD++KP +++ + D
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 198
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+R+ V P T LRE F + V DV++ + DG+ + +GF+ + TE+QA
Sbjct: 66 NRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK--DGKFRNFGFVGYRTEEQAIAAKE 657
R+++KNL V HL E+F G + +V L + + R +G+V Y E A + +
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 658 YFDGTCIRSMKIEVQTCV 711
+ DG I M + V+ +
Sbjct: 194 HMDGGQIDGMAVHVEMTI 211
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQA 642
+R+ V P T LRE F + V DV++ + DG+ + +GF+ + TE+QA
Sbjct: 67 NRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
L VKN+ + D LR+ F G +T ++ ++G+ + FGFV + E+A AA
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAA 399
Score = 37.9 bits (84), Expect = 0.014
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAK 654
+ + + VKN + + L +F + GE+T + GK + FGFV + ++ A A
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAV 295
Query: 655 EYFDGTCIRSMKIEVQTC 708
E + + + ++ C
Sbjct: 296 EKLNDSILEGTDCKLSVC 313
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
+ +KNL + + + F G + ++ +G + +GFV + TE A A E +
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 667 GTCIRSMKIEV 699
G + K+ V
Sbjct: 207 GMLLSDKKVYV 217
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
L VKN+ + D LR+ F G +T ++ ++G+ + FGFV + E+A AA
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAA 399
Score = 37.9 bits (84), Expect = 0.014
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAK 654
+ + + VKN + + L +F + GE+T + GK + FGFV + ++ A A
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAV 295
Query: 655 EYFDGTCIRSMKIEVQTC 708
E + + + ++ C
Sbjct: 296 EKLNDSILEGTDCKLSVC 313
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
+ +KNL + + + F G + ++ +G + +GFV + TE A A E +
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 667 GTCIRSMKIEV 699
G + K+ V
Sbjct: 207 GMLLSDKKVYV 217
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/80 (23%), Positives = 41/80 (51%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+++ + + VKN + + L ++F + G +T ++ T +GK + FGFV + E+A
Sbjct: 209 AKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAET 267
Query: 649 AKEYFDGTCIRSMKIEVQTC 708
A + + I +++ C
Sbjct: 268 AVQALHDSTIEGTDLKLHVC 287
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
L VKNL V D L++ F G +T ++ ++G+ + FGFV + E+A +A
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSA 373
Score = 35.9 bits (79), Expect = 0.055
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
+ +KNL + + + F G + ++ +DG + +GFV + TEE A A + +
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 667 GTCIRSMKIEV 699
G + K+ V
Sbjct: 182 GMLLAGKKVFV 192
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 38.7 bits (86), Expect = 0.008
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +1
Query: 538 LFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEVQTCVDL 717
+F + G V DV++ + + G + FGFV + + A A+ F+GT I ++EV
Sbjct: 1 MFEKVGPVVDVEIIFNERGS-KGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
Query: 718 GDEKKPR 738
KK +
Sbjct: 60 VHNKKAK 66
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 37.9 bits (84), Expect = 0.014
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 538 LFGQKGEVTDVQLKYTKD-GKFRNFGFVGYRTEEQAIAAKEYFDGTCIRSMKIEVQTCVD 714
+F Q GEV ++ L KD GK + F F+ Y+ + I A + F+G + I VD
Sbjct: 57 VFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIR----VD 112
Query: 715 LGDEKKPRAWSKYASDST 768
+E K + + A D T
Sbjct: 113 HVEEYKVPKYKEDADDET 130
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 37.5 bits (83), Expect = 0.018
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
R+ + NL V D L E+FG G++T + + K+GK + + Y +A+ A
Sbjct: 189 RIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSML 248
Query: 664 DG 669
+G
Sbjct: 249 NG 250
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 37.5 bits (83), Expect = 0.018
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 487 LIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYFD 666
L +KNLP K+T + + E+FG+ G V +++ T + R FV Y A A E+
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNT--AETRGTAFVVYEDIFDAKTACEHLS 78
Query: 667 G 669
G
Sbjct: 79 G 79
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.1 bits (82), Expect = 0.024
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKD-GKFRNFGFVGYRTEEQAIAAKEYFDG 669
V N P + T D L F Q G V++V++ ++ G+ R F FV + E A A + F+G
Sbjct: 8 VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67
Query: 670 TCIRSMKIEV 699
+ V
Sbjct: 68 VDFNGRALRV 77
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 37.1 bits (82), Expect = 0.024
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R +L + L K ++LRE+F + G + D + +DGK R FV + A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVV 197
Query: 649 A 651
A
Sbjct: 198 A 198
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 37.1 bits (82), Expect = 0.024
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R +L + L K ++LRE+F + G + D + +DGK R FV + A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVV 197
Query: 649 A 651
A
Sbjct: 198 A 198
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 37.1 bits (82), Expect = 0.024
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R +L + L K ++LRE+F + G + D + +DGK R FV + A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVV 197
Query: 649 A 651
A
Sbjct: 198 A 198
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 37.1 bits (82), Expect = 0.024
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R +L + L K ++LRE+F + G + D + +DGK R FV + A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVV 197
Query: 649 A 651
A
Sbjct: 198 A 198
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 37.1 bits (82), Expect = 0.024
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R +L + L K ++LRE+F + G + D + +DGK R FV + A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVV 197
Query: 649 A 651
A
Sbjct: 198 A 198
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 37.1 bits (82), Expect = 0.024
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIA 648
+R +L + L K ++LRE+F + G + D + +DGK R FV + A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVV 197
Query: 649 A 651
A
Sbjct: 198 A 198
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.073
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEE---QAIAA 651
++ V + +V + L F Q GEV Q+KY + +G+ R F FV + T E A+AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 652 KE 657
+E
Sbjct: 90 RE 91
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.073
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEE---QAIAA 651
++ V + +V + L F Q GEV Q+KY + +G+ R F FV + T E A+AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 652 KE 657
+E
Sbjct: 90 RE 91
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 35.1 bits (77), Expect = 0.096
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 493 VKNLPNKVTVDHLRELFGQKGEVTDVQLKYTK-DGKFRNFGFVGYRTEEQAIAA 651
V NLP ++ D LR+LFG+ G V + + K G + F FV + + + A A
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARA 233
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
+ ++ V L + T D +RE + Q GE+TD + ++ + R FGFV + + + AA
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAA 80
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
+ ++ V L + T D +RE + Q GE+TD + ++ + R FGFV + + + AA
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAA 80
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 478 MSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGYRTEEQAIAA 651
+ ++ V L + T D +RE + Q GE+TD + ++ + R FGFV + + + AA
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAA 80
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 34.3 bits (75), Expect = 0.17
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYT-KDGK-FRNFGFVGYRTEEQAIAAKE 657
RLI++NLP K + L+ L G+ ++ L + KD K FGF+ + + A +E
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155
Query: 658 YFDGTCIRSMKIEVQTCVD 714
+F+ + + +D
Sbjct: 156 FFNTNKVLGRSVAADWALD 174
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 32.7 bits (71), Expect = 0.51
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 475 RMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQ-LKYTKDGKFRNFGFVGYRTEEQAIAA 651
R + V +L +++ LRE F + GEV++ + ++ K + +GFV Y E A A
Sbjct: 130 RHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189
Query: 652 KEYFDGTCIRSMKIEVQTCVDLGDEKKPR 738
+ +G + I DE R
Sbjct: 190 IDEMNGAWLGRRTIRTNWATRKPDEDGER 218
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.90
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQL 576
RL V NLPN+V L+ELF G++ + L
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL 147
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 463 H*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGY 624
H S+ ++ + L + T ++LR+ FG+ GEV + + ++ + R FGF+ +
Sbjct: 39 HGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF 93
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 469 SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFR 603
+R +L + L K ++LRE+F + G + D + +DGK R
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR 182
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 463 H*SRRMSRLIVKNLPNKVTVDHLRELFGQKGEVTD-VQLKYTKDGKFRNFGFVGY 624
H S+ ++ + L + T ++LR+ FG+ GEV + + ++ + R FGF+ +
Sbjct: 39 HGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF 93
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/106 (19%), Positives = 43/106 (40%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
S + V N+ +K + + +R++ + G V + +GK + FGF + E + A
Sbjct: 47 SPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRI 106
Query: 661 FDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEI 798
+ K+ V+ + D+ + A K+ DE+
Sbjct: 107 LHEFHLGDKKLTVKPDEKVRDDLRKNAIENRKRQGKKELKLKHDEL 152
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/106 (19%), Positives = 43/106 (40%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
S + V N+ +K + + +R++ + G V + +GK + FGF + E + A
Sbjct: 47 SPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRI 106
Query: 661 FDGTCIRSMKIEVQTCVDLGDEKKPRAWSKYASDSTAYKKIHKDEI 798
+ K+ V+ + D+ + A K+ DE+
Sbjct: 107 LHEFHLGDKKLTVKPDEKVRDDLRKNAIENRKRQGKKELKLKHDEL 152
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 487 LIVKNLPN-KVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
++V NL KVT D L LFG G+V V++ Y K ++ + Y +QA A +
Sbjct: 261 ILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNK----KDNALIQYSEPQQAQLALTHL 316
Query: 664 D 666
D
Sbjct: 317 D 317
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 487 LIVKNLPN-KVTVDHLRELFGQKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAIAAKEYF 663
++V NL KVT D L LFG G+V V++ Y K ++ + Y +QA A +
Sbjct: 423 ILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNK----KDNALIQYSEPQQAQLALTHL 478
Query: 664 D 666
D
Sbjct: 479 D 479
>AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical
protein C02B10.4 protein.
Length = 211
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +1
Query: 481 SRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGK 597
S LI+KNL VT + L ELF Q E VQL Y G+
Sbjct: 93 STLIIKNLATTVTQEDLEELFEQY-EPELVQLHYGPTGE 130
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 29.1 bits (62), Expect = 6.3
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 472 RRMSRLIVKNLPNKVTVDHLRELFGQKGEVTDVQLKYTKDGKFR-NFGFVGYRTEEQAIA 648
R L V NL D + ELFG+ G+V V + + K F FV Y T E A
Sbjct: 34 RTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAEL 93
Query: 649 AKEYFDGT 672
A + T
Sbjct: 94 ALQNISNT 101
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 484 RLIVKNLPNKVTVDHLRELFGQKGEVTDVQL-KYTKDGKFRNFGFVGYRTEEQAIAAKEY 660
R+ +L N+V+ + L + F + ++ + ++ K + +GFV +R E + A
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 661 FDGTCIRSMKIEVQ 702
DG + + I+++
Sbjct: 264 MDGKYVGNRPIKLR 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,469,098
Number of Sequences: 27780
Number of extensions: 380965
Number of successful extensions: 879
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3192944148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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