Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_B23
(1194 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 38 0.021
07_03_1136 + 24218601-24218734,24218769-24219906 34 0.25
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.25
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.77
12_02_1174 - 26696869-26698191 31 1.4
06_01_0486 - 3455030-3455770 31 1.4
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.8
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 31 2.4
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 2.4
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 4.1
04_03_1022 - 21778315-21779007 30 4.1
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 29 5.5
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 5.5
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 29 9.5
07_03_1751 - 29215074-29216270 29 9.5
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 9.5
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 37.5 bits (83), Expect = 0.021
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXF---PXXGGGXPPXXGGGXX 1003
P PP PP PPP P G GG T P GGG GGG
Sbjct: 52 PSYYPPPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGI 111
Query: 1004 XXPP 1015
PP
Sbjct: 112 YYPP 115
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.9 bits (74), Expect = 0.25
Identities = 24/71 (33%), Positives = 24/71 (33%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXGGXXXXXXXXXXXRGXRGGFRG 833
GG PP GG PP G P PGGG GG R GG G
Sbjct: 102 GGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGG--------GAPRRVLGGGGG 153
Query: 832 GXXXFXXPRGG 800
G P GG
Sbjct: 154 GGALARPPGGG 164
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 1015 GGGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXGG 893
GGG P GG PP G PP GGG GG
Sbjct: 102 GGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGG 142
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXGG 893
GG PP GG P G P PGGG GG
Sbjct: 166 GGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGG 205
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 832 PPGNPPGXPXXXXXXXXXKXXPPXPPRXXXGGXFXNPXXXFSXXGGGXPPPXXGGXXXXP 1011
PP G P PP PP GG P GG PPP G P
Sbjct: 1101 PPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGP 1160
Query: 1012 P 1014
P
Sbjct: 1161 P 1161
Score = 32.7 bits (71), Expect = 0.59
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 894 PPXPPPGXXGGXFXKPXXXXFXXGGGGXPPXXGGXXXXPPP 1016
PP PP G GG P F GG PP G PPP
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFR--GGTPPPNAHGGVAPPPP 1187
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +3
Query: 792 GGDPPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXP-PPGXXGGXFXKPXXXXFXXGG 968
GG PP PP PPR P P PPG GG P GG
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP-------GG 1223
Query: 969 GGXPPXXGG 995
G P GG
Sbjct: 1224 RGLPAPPGG 1232
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -3
Query: 1009 GXXXXPPXXG-GXPPPPXXKXXXXGFXXXPPXXPGGGXGG 893
G PP G G PPPP G PP P GG GG
Sbjct: 1096 GVAPPPPSIGAGAPPPP---PPPGGITGVPPPPPIGGLGG 1132
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +1
Query: 823 PXXPPGNPPGXPXXXXXXXXX-KXXPPXPPRXXXGGXFXNPXXXFSXXGGGXPPPXXGGX 999
P PPG G P PP PP G P G PPP G
Sbjct: 1111 PPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFR 1170
Query: 1000 XXXPP 1014
PP
Sbjct: 1171 GGTPP 1175
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.77
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = -1
Query: 633 PPXGXXXLXPPXLPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNPPPPPXXLXN 463
PP L P P P +PP P P PPPPP L N
Sbjct: 591 PPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPN 647
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -1
Query: 606 PPXLPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNPPPPPXXLXN 463
PP P P PP P P PPPPP L N
Sbjct: 567 PPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPN 614
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 801 PPRGXKXXXXPPRK---PPRXPLXXXXXXXXKXXPPXPPP 911
PP G K PP PP PL + PP PPP
Sbjct: 553 PPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPP 592
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 795 GDPPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPP 911
GD P + PP PPR P+ K PP P P
Sbjct: 234 GDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSP 272
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 831 PPRKPPRXPLXXXXXXXXKXXPPXPPP 911
PP PPR P K PP PPP
Sbjct: 225 PPTVPPRTPGDTPAVVEPKPQPPPPPP 251
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.5 bits (68), Expect = 1.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPP 910
PP TPP PP PPP PP
Sbjct: 125 PPPTPPSPPPYVPPPTPPSPPPYVPP 150
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 994 PPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXGG 893
PP G PPPP K G PP PGG GG
Sbjct: 347 PPPAKGPPPPPPPK----GPSPPPPPPPGGKKGG 376
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +1
Query: 823 PXXPPGNPPGXPXXXXXXXXXKXXPPXPPRXXXGGXFXNPXXXFSXXGGGXPPPXXGGXX 1002
P P PP P PP PP G P GG PPP GG
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPP-PPKGPSPPPPPPPGGKKGGPPPPPPKGGAS 387
Query: 1003 XXP 1011
P
Sbjct: 388 RPP 390
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGGGGXP 980
PP+ P PP P P PPP GG P GG P
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP-PKGGASRP 389
Query: 981 PXXGG 995
P G
Sbjct: 390 PAAPG 394
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 994 PPXXGGXPPPPXXKXXXXGFXXXPPXXPGG 905
PP G PPPP G PP PGG
Sbjct: 363 PPGPGPGPPPPPGAAGRGGGGPPPPALPGG 392
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 993 PPXWGGXPPPXXGKXXXXVXKXXPPXXPGGXRGGG 889
PP G PPP G PP PGG R G
Sbjct: 363 PPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARG 397
>09_04_0684 - 19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +1
Query: 835 PGNPPGXPXXXXXXXXXKXXPPXPPRXXXGGXFXNPXXXFSXXG--GGXPPPXXGGXXXX 1008
PG G P + PP PP G NP G GG PPP GG
Sbjct: 303 PGYQGGPPGYQGSNQGYQGPPPPPPSAYQGN---NPGYQGGGPGYQGGNPPPYQGGNPGY 359
Query: 1009 PP 1014
P
Sbjct: 360 AP 361
>01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = -3
Query: 1015 GGGXXXXPPXXGGXPP-PPXXKXXXXGFXXXPPXXPGGGXGGXXXXXXXXXXXRGXRGGF 839
GGG PP G PP PP G PP GG G GG
Sbjct: 344 GGGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGG 403
Query: 838 RGG 830
GG
Sbjct: 404 GGG 406
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPPG 913
PP TPP PP PPP P G
Sbjct: 1165 PPATPPPPPPLSPSLPPPPPPPPLPSG 1191
>04_03_1022 - 21778315-21779007
Length = 230
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = -1
Query: 633 PPXGXXXLXPPXLPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNPPPP 481
PP PP GG+PP P P ++ PPPP
Sbjct: 86 PPHHPHHHHPPTPAPAPSTTPGGHGGVPPYYPPPPVTPTPYYYPSPAPPPP 136
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = -1
Query: 657 PFXGXXXXPPXGXXXLXPPXLPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNP--PP 484
P G PP P P G PP P P +F + P PP
Sbjct: 45 PQSGPYPYPPPSGAVYPPQGYPSSHGVYPPPQGPYPPPHQPPPPGYQGYFNQGQQPYYPP 104
Query: 483 PP 478
PP
Sbjct: 105 PP 106
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 818 KXXXXPPETPPXPPXXXXXXXXXXPPPLXPP 910
K PP PP PP PPP PP
Sbjct: 1922 KPKQPPPHAPPPPPPPPPVEGKPKPPPHAPP 1952
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGGXPPXXGGG 997
P PP PP PPP P GG + GG PP GG
Sbjct: 65 PSRAPPPPPSHHERAPSDAPPPPPPAPYAGG----SPYHRHAAGGGETPPARRGG 115
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 909 GGXRGGGFXXXXXXXXXGGXGGVSGG 832
GG +GGGF GG GG +GG
Sbjct: 318 GGGKGGGFGGGFGGGKGGGVGGGAGG 343
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGG 926
PP PPR PP P + PP PPP GG
Sbjct: 39 PPPARHRAPSPPRPPPPPP------PPTQPAPPPPPPARSGG 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,345,212
Number of Sequences: 37544
Number of extensions: 580541
Number of successful extensions: 2790
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2296
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3643211076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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