Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_B23
(1194 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.043
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.043
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.043
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.30
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 2.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 8.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.043
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGGXPPXXGGGXXXXP 1012
PP T PP PPP PPG G T P GG PP GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 1013 P 1015
P
Sbjct: 764 P 764
Score = 34.3 bits (75), Expect = 0.17
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXGGXXXXXXXXXXXRGXRGGFRG 833
GG PP GG PPPP G PP P GG G G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGG---PPPPPPPGGL-PPITGGPPPPPPPGGLPPISG 756
Query: 832 GXXXFXXPRGGSPP 791
G P GG PP
Sbjct: 757 GPPPPPPPPGGCPP 770
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGG 902
GG PP GG PPPP GF PP P G
Sbjct: 756 GGPPPPPPPPGGCPPPP-PPPPPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -1
Query: 660 PPFXGXXXXPPXGXXXLXPPXLPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNPPPP 481
PP G PP PP P GG PP P P F PPPP
Sbjct: 736 PPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPPPP 789
Query: 480 P 478
P
Sbjct: 790 P 790
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +1
Query: 823 PXXPP--GNPPGXPXXXXXXXXXKXXPPXPPRXXXGGXFXNPXXXFSXXGG---GXPPPX 987
P PP G PP P PP PP P GG PPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 988 XGGXXXXPP 1014
GG PP
Sbjct: 777 PGGFKGGPP 785
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Frame = +3
Query: 792 GGDPPRGXKXXXX-PPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGG 968
G PP G PP PP L PP PPPG P GG
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 969 ---GGXPPXXGGXXXXPPP 1016
PP GG PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.043
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGGXPPXXGGGXXXXP 1012
PP T PP PPP PPG G T P GG PP GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 1013 P 1015
P
Sbjct: 764 P 764
Score = 34.3 bits (75), Expect = 0.17
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXGGXXXXXXXXXXXRGXRGGFRG 833
GG PP GG PPPP G PP P GG G G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGG---PPPPPPPGGL-PPITGGPPPPPPPGGLPPISG 756
Query: 832 GXXXFXXPRGGSPP 791
G P GG PP
Sbjct: 757 GPPPPPPPPGGCPP 770
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGG 902
GG PP GG PPPP GF PP P G
Sbjct: 756 GGPPPPPPPPGGCPPPP-PPPPPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -1
Query: 660 PPFXGXXXXPPXGXXXLXPPXLPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNPPPP 481
PP G PP PP P GG PP P P F PPPP
Sbjct: 736 PPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPPPP 789
Query: 480 P 478
P
Sbjct: 790 P 790
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +1
Query: 823 PXXPP--GNPPGXPXXXXXXXXXKXXPPXPPRXXXGGXFXNPXXXFSXXGG---GXPPPX 987
P PP G PP P PP PP P GG PPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 988 XGGXXXXPP 1014
GG PP
Sbjct: 777 PGGFKGGPP 785
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Frame = +3
Query: 792 GGDPPRGXKXXXX-PPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGG 968
G PP G PP PP L PP PPPG P GG
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 969 ---GGXPPXXGGXXXXPPP 1016
PP GG PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.043
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGGXPPXXGGGXXXXP 1012
PP T PP PPP PPG G T P GG PP GG P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Query: 1013 P 1015
P
Sbjct: 347 P 347
Score = 34.3 bits (75), Expect = 0.17
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXGGXXXXXXXXXXXRGXRGGFRG 833
GG PP GG PPPP G PP P GG G G
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGG---PPPPPPPGGL-PPITGGPPPPPPPGGLPPISG 339
Query: 832 GXXXFXXPRGGSPP 791
G P GG PP
Sbjct: 340 GPPPPPPPPGGCPP 353
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGG 902
GG PP GG PPPP GF PP P G
Sbjct: 339 GGPPPPPPPPGGCPPPP-PPPPPGGFKGGPPPPPPPG 374
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -1
Query: 660 PPFXGXXXXPPXGXXXLXPPXLPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNPPPP 481
PP G PP PP P GG PP P P F PPPP
Sbjct: 319 PPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPPPP 372
Query: 480 P 478
P
Sbjct: 373 P 373
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +1
Query: 823 PXXPP--GNPPGXPXXXXXXXXXKXXPPXPPRXXXGGXFXNPXXXFSXXGG---GXPPPX 987
P PP G PP P PP PP P GG PPP
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 988 XGGXXXXPP 1014
GG PP
Sbjct: 360 PGGFKGGPP 368
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Frame = +3
Query: 792 GGDPPRGXKXXXX-PPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGG 968
G PP G PP PP L PP PPPG P GG
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 969 ---GGXPPXXGGXXXXPPP 1016
PP GG PPP
Sbjct: 351 CPPPPPPPPPGGFKGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.30
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGGGGXP 980
PPR P PP P PP PPP P GG P
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS----PPTGSLPPPQAGGSP 321
Query: 981 PXXGGXXXXPPP 1016
P G PPP
Sbjct: 322 PPAGTGSPPPPP 333
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGGGGXP 980
PP G PP+ P PL PPP G P GG P
Sbjct: 232 PPAGSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 981 PXXGGXXXXPPP 1016
P PPP
Sbjct: 290 PPPRAGSPPPPP 301
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 1014 GGXXXXPPPXWGGXPPPXXGKXXXXVXKXXPPXXPGG 904
G PPP G PPP G PP GG
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.30
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGGGGXP 980
PPR P PP P PP PPP P GG P
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS----PPTGSLPPPQAGGSP 342
Query: 981 PXXGGXXXXPPP 1016
P G PPP
Sbjct: 343 PPAGTGSPPPPP 354
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGGGGXP 980
PP G PP+ P PL PPP G P GG P
Sbjct: 253 PPAGSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 981 PXXGGXXXXPPP 1016
P PPP
Sbjct: 311 PPPRAGSPPPPP 322
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 1014 GGXXXXPPPXWGGXPPPXXGKXXXXVXKXXPPXXPGG 904
G PPP G PPP G PP GG
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.30
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGGGGXP 980
PPR P PP P PP PPP P GG P
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS----PPTGSLPPPQAGGSP 327
Query: 981 PXXGGXXXXPPP 1016
P G PPP
Sbjct: 328 PPAGTGSPPPPP 339
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGGGGXP 980
PP G PP+ P PL PPP G P GG P
Sbjct: 238 PPAGSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 981 PXXGGXXXXPPP 1016
P PPP
Sbjct: 296 PPPRAGSPPPPP 307
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 1014 GGXXXXPPPXWGGXPPPXXGKXXXXVXKXXPPXXPGG 904
G PPP G PPP G PP GG
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 1012 GGXXXXPPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXG 896
GG PP GG PPPP F PP P G G
Sbjct: 92 GGIPPPPPMMGGIPPPPPM------FGAPPPPPPPSGLG 124
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 5/66 (7%)
Frame = +2
Query: 833 PPETPPXP-----PXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGGXPPXXGGG 997
PP PP P P PPP PPG G P PP GG
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 998 XXXXPP 1015
PP
Sbjct: 334 PPPPPP 339
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +1
Query: 823 PXXPPGNPPGXPXXXXXXXXXKXXPPXPP--RXXXGGXFXNPXXXFSXXGGGXPPPXXGG 996
P PG PP P PP PP GG P + G G PP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
Query: 997 XXXXPP 1014
PP
Sbjct: 370 RPPAPP 375
Score = 29.1 bits (62), Expect = 6.5
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPG--XXGGXFXKPXXXXFXXGGGG 974
PP P PP P PP PPPG GG P G G
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 362
Query: 975 XPPXXGGXXXXPP 1013
PP PP
Sbjct: 363 YPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 5/66 (7%)
Frame = +2
Query: 833 PPETPPXP-----PXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGGXPPXXGGG 997
PP PP P P PPP PPG G P PP GG
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 998 XXXXPP 1015
PP
Sbjct: 344 PPPPPP 349
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +1
Query: 823 PXXPPGNPPGXPXXXXXXXXXKXXPPXPP--RXXXGGXFXNPXXXFSXXGGGXPPPXXGG 996
P PG PP P PP PP GG P + G G PP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
Query: 997 XXXXPP 1014
PP
Sbjct: 380 RPPAPP 385
Score = 29.1 bits (62), Expect = 6.5
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPG--XXGGXFXKPXXXXFXXGGGG 974
PP P PP P PP PPPG GG P G G
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 372
Query: 975 XPPXXGGXXXXPP 1013
PP PP
Sbjct: 373 YPPPPPSRPPAPP 385
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 1014 GGXXXXPPPXWGGXPPPXXGKXXXXVXKXXPPXXPGGXRGGGFXXXXXXXXXGGXGGVSG 835
GG P P GG G P GG GGG GG GG G
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGG 105
Query: 834 G 832
G
Sbjct: 106 G 106
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 1014 GGXXXXPPPXWGGXPPPXXGKXXXXVXKXXPPXXPGGXRGGGFXXXXXXXXXGGXGGVSG 835
GG P P GG G P GG GGG GG GG G
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGG 105
Query: 834 G 832
G
Sbjct: 106 G 106
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical protein
T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +2
Query: 836 PETPPXPPXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGGXPPXXGGGXXXXPP 1015
P PP P P P PPG G G P GGG PP
Sbjct: 246 PAGPPGPAGNAGQAGYAQPGPAGPPGDAGPDGAPGNPGQPGAPGDAGAPGSGGGCDHCPP 305
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGG 973
PP PP PP PPP PP G + P G
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPPAQDG 676
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPPGXXGGXXXKTXXXXFPXXGGG 973
PP PP PP PPP PP G + P G
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPPAQDG 502
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Frame = +1
Query: 832 PPGNPPGXPXXXXXXXXXKXXPPXPPRXXXGGXFXNPXXXFSXXGG---GXPPPXXGGXX 1002
PPG P P PP PP G P F G PPP GG
Sbjct: 721 PPGVGPPPPQGIPPMGFDPNKPP-PPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMH 779
Query: 1003 XXPP 1014
PP
Sbjct: 780 HMPP 783
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 833 PPETPPXPPXXXXXXXXXXPPPLXPP 910
PP PP PP PPP+ PP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPP 53
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 597 LPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNPPPPP 478
+P P GG +PP P P PPPPP
Sbjct: 659 MPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 597 LPXXXXPXXXXGGGIPPXXTPXPXXXXXFFXXXKNPPPPP 478
+P P GG +PP P P PPPPP
Sbjct: 659 MPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 994 PPXXGGXPPPPXXKXXXXGFXXXPPXXPGGGXG 896
P G PPPP G PP PGG G
Sbjct: 569 PQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 8.6
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 5/77 (6%)
Frame = +3
Query: 801 PPRGXKXXXXPPRKPPRXPLXXXXXXXXKXXPPXPPPGXXGGXFXKPXXXXFXXGGGG-- 974
PP K PP P P PP PPP G P G G
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPP-PPPKGTGSPTPPPTGEPQDLSGEGNA 247
Query: 975 ---XPPXXGGXXXXPPP 1016
PP G PPP
Sbjct: 248 SRRPPPPPKGTGSPPPP 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,140,194
Number of Sequences: 27780
Number of extensions: 341160
Number of successful extensions: 1892
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3276419812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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