Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_B18
(1266 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit pro... 203 9e-52
BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin) ... 203 9e-52
BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin) ... 203 9e-52
BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin) ... 203 9e-52
BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin) ... 203 9e-52
L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein. 203 1e-51
>L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit
protein.
Length = 876
Score = 203 bits (496), Expect = 9e-52
Identities = 104/175 (59%), Positives = 124/175 (70%)
Frame = +2
Query: 302 LTLIXILEXTVSPDRNELEAAVRYLDHAATTNXTTCIKMLSDVLLQGGNSQVARMAAGLQ 481
+ LI ILE TVSPDR ELEAA ++L+ AA N T + LS VL GNSQVAR+AAGLQ
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQ 60
Query: 482 LKNHLTSKDPTLKQQYQQRWLALAEDVRLXIKENILAAIGTENSRPSLAAQCVAYVAVAE 661
+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS A+QCVA +A AE
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 662 LPVGQWNDLIPILVENVVHVQSXELKKEAXLEAIGYICXDIDAEXLTXRSNRILT 826
+PV QW +LIP LV NV + S E KE+ LEAIGYIC DID E L +SN ILT
Sbjct: 121 IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILT 175
>BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 203 bits (496), Expect = 9e-52
Identities = 104/175 (59%), Positives = 124/175 (70%)
Frame = +2
Query: 302 LTLIXILEXTVSPDRNELEAAVRYLDHAATTNXTTCIKMLSDVLLQGGNSQVARMAAGLQ 481
+ LI ILE TVSPDR ELEAA ++L+ AA N T + LS VL GNSQVAR+AAGLQ
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQ 60
Query: 482 LKNHLTSKDPTLKQQYQQRWLALAEDVRLXIKENILAAIGTENSRPSLAAQCVAYVAVAE 661
+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS A+QCVA +A AE
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 662 LPVGQWNDLIPILVENVVHVQSXELKKEAXLEAIGYICXDIDAEXLTXRSNRILT 826
+PV QW +LIP LV NV + S E KE+ LEAIGYIC DID E L +SN ILT
Sbjct: 121 IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILT 175
>BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 203 bits (496), Expect = 9e-52
Identities = 104/175 (59%), Positives = 124/175 (70%)
Frame = +2
Query: 302 LTLIXILEXTVSPDRNELEAAVRYLDHAATTNXTTCIKMLSDVLLQGGNSQVARMAAGLQ 481
+ LI ILE TVSPDR ELEAA ++L+ AA N T + LS VL GNSQVAR+AAGLQ
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQ 60
Query: 482 LKNHLTSKDPTLKQQYQQRWLALAEDVRLXIKENILAAIGTENSRPSLAAQCVAYVAVAE 661
+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS A+QCVA +A AE
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 662 LPVGQWNDLIPILVENVVHVQSXELKKEAXLEAIGYICXDIDAEXLTXRSNRILT 826
+PV QW +LIP LV NV + S E KE+ LEAIGYIC DID E L +SN ILT
Sbjct: 121 IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILT 175
>BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 203 bits (496), Expect = 9e-52
Identities = 104/175 (59%), Positives = 124/175 (70%)
Frame = +2
Query: 302 LTLIXILEXTVSPDRNELEAAVRYLDHAATTNXTTCIKMLSDVLLQGGNSQVARMAAGLQ 481
+ LI ILE TVSPDR ELEAA ++L+ AA N T + LS VL GNSQVAR+AAGLQ
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQ 60
Query: 482 LKNHLTSKDPTLKQQYQQRWLALAEDVRLXIKENILAAIGTENSRPSLAAQCVAYVAVAE 661
+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS A+QCVA +A AE
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 662 LPVGQWNDLIPILVENVVHVQSXELKKEAXLEAIGYICXDIDAEXLTXRSNRILT 826
+PV QW +LIP LV NV + S E KE+ LEAIGYIC DID E L +SN ILT
Sbjct: 121 IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILT 175
>BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 203 bits (496), Expect = 9e-52
Identities = 104/175 (59%), Positives = 124/175 (70%)
Frame = +2
Query: 302 LTLIXILEXTVSPDRNELEAAVRYLDHAATTNXTTCIKMLSDVLLQGGNSQVARMAAGLQ 481
+ LI ILE TVSPDR ELEAA ++L+ AA N T + LS VL GNSQVAR+AAGLQ
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQ 60
Query: 482 LKNHLTSKDPTLKQQYQQRWLALAEDVRLXIKENILAAIGTENSRPSLAAQCVAYVAVAE 661
+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS A+QCVA +A AE
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 662 LPVGQWNDLIPILVENVVHVQSXELKKEAXLEAIGYICXDIDAEXLTXRSNRILT 826
+PV QW +LIP LV NV + S E KE+ LEAIGYIC DID E L +SN ILT
Sbjct: 121 IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILT 175
>L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein.
Length = 876
Score = 203 bits (495), Expect = 1e-51
Identities = 104/175 (59%), Positives = 124/175 (70%)
Frame = +2
Query: 302 LTLIXILEXTVSPDRNELEAAVRYLDHAATTNXTTCIKMLSDVLLQGGNSQVARMAAGLQ 481
+ LI ILE TVSPDR ELEAA ++L+ AA N T + LS VL GNSQVAR+AAGLQ
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQ 60
Query: 482 LKNHLTSKDPTLKQQYQQRWLALAEDVRLXIKENILAAIGTENSRPSLAAQCVAYVAVAE 661
+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS A+QCVA +A AE
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYRPSSASQCVAGIACAE 120
Query: 662 LPVGQWNDLIPILVENVVHVQSXELKKEAXLEAIGYICXDIDAEXLTXRSNRILT 826
+PV QW +LIP LV NV + S E KE+ LEAIGYIC DID E L +SN ILT
Sbjct: 121 IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILT 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,067,986
Number of Sequences: 237096
Number of extensions: 2011973
Number of successful extensions: 3134
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3134
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18110209670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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