Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_B14
         (1278 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    54   7e-09
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    26   2.7  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 54.4 bits (125), Expect = 7e-09
 Identities = 27/91 (29%), Positives = 48/91 (52%)
 Frame = +1

Query: 325 QLRKGAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFVRSKQALGRAC 504
           QLR+G     K + +  ++L+I+A D +P+E+V+++P LC    VPY  ++ K  LG   
Sbjct: 141 QLRQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTL- 199

Query: 505 GVSRPIISCSITINEGSQLKPQIQTIQQEIE 597
            V R   +C       +  KP +  + + I+
Sbjct: 200 -VYRKTCTCVALTQFENADKPNLAKLVETIK 229


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 459 AICVC*V*ASTRSCLRCFQTHHILLD 536
           ++C   +   +R C RC+QT HI  D
Sbjct: 418 SVCPVRINIPSRRCYRCWQTDHISQD 443


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,027
Number of Sequences: 2352
Number of extensions: 9440
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 146740173
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)