Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_B14
         (1278 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF208396-1|AAF20209.1|  127|Drosophila melanogaster Hoi-polloi p...   179   9e-45
AE014134-1677|AAF52798.2|  127|Drosophila melanogaster CG3949-PA...   179   9e-45
BT023752-1|AAZ41760.1|  160|Drosophila melanogaster RH66170p pro...    64   5e-10
AF217228-1|AAF27630.1|  160|Drosophila melanogaster nucleolar pr...    64   5e-10
AE014296-2434|AAF49701.1|  160|Drosophila melanogaster CG5258-PA...    64   5e-10
X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...    53   1e-06
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...    53   1e-06
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...    53   1e-06
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...    53   1e-06
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...    53   1e-06

>AF208396-1|AAF20209.1|  127|Drosophila melanogaster Hoi-polloi
           protein.
          Length = 127

 Score =  179 bits (435), Expect = 9e-45
 Identities = 81/107 (75%), Positives = 97/107 (90%)
 Frame = +1

Query: 289 ILNLVQQAXNYKQLRKGAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYV 468
           I+NL+QQA NY QLRKGA  ATK LNRGL++++++A DAEP+EI+LH+P+LCE KNVPYV
Sbjct: 21  IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80

Query: 469 FVRSKQALGRACGVSRPIISCSITINEGSQLKPQIQTIQQEIERLLV 609
           FVRSKQALGRACGVSRPI++CS+T NEGSQLK QI +IQQEIERLLV
Sbjct: 81  FVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIERLLV 127


>AE014134-1677|AAF52798.2|  127|Drosophila melanogaster CG3949-PA
           protein.
          Length = 127

 Score =  179 bits (435), Expect = 9e-45
 Identities = 81/107 (75%), Positives = 97/107 (90%)
 Frame = +1

Query: 289 ILNLVQQAXNYKQLRKGAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYV 468
           I+NL+QQA NY QLRKGA  ATK LNRGL++++++A DAEP+EI+LH+P+LCE KNVPYV
Sbjct: 21  IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80

Query: 469 FVRSKQALGRACGVSRPIISCSITINEGSQLKPQIQTIQQEIERLLV 609
           FVRSKQALGRACGVSRPI++CS+T NEGSQLK QI +IQQEIERLLV
Sbjct: 81  FVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIERLLV 127


>BT023752-1|AAZ41760.1|  160|Drosophila melanogaster RH66170p
           protein.
          Length = 160

 Score = 63.7 bits (148), Expect = 5e-10
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +1

Query: 298 LVQQAXNYKQ-LRKGAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFV 474
           LV++A  +K  LR G       L +G + + I A D  P++I+ H+P +CE K +PY + 
Sbjct: 56  LVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYT 115

Query: 475 RSKQALGRACGVSRPIISCSITINEGSQLKPQIQTIQQEIERL 603
            S+  LG A GV R  ++  +  NE  + K     +++E+  L
Sbjct: 116 PSRADLGAAMGVKRGTVALLVRQNE--EYKDLYDEVKEELSAL 156


>AF217228-1|AAF27630.1|  160|Drosophila melanogaster nucleolar
           protein NHP2 protein.
          Length = 160

 Score = 63.7 bits (148), Expect = 5e-10
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +1

Query: 298 LVQQAXNYKQ-LRKGAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFV 474
           LV++A  +K  LR G       L +G + + I A D  P++I+ H+P +CE K +PY + 
Sbjct: 56  LVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYT 115

Query: 475 RSKQALGRACGVSRPIISCSITINEGSQLKPQIQTIQQEIERL 603
            S+  LG A GV R  ++  +  NE  + K     +++E+  L
Sbjct: 116 PSRADLGAAMGVKRGTVALLVRQNE--EYKDLYDEVKEELSAL 156


>AE014296-2434|AAF49701.1|  160|Drosophila melanogaster CG5258-PA
           protein.
          Length = 160

 Score = 63.7 bits (148), Expect = 5e-10
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +1

Query: 298 LVQQAXNYKQ-LRKGAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFV 474
           LV++A  +K  LR G       L +G + + I A D  P++I+ H+P +CE K +PY + 
Sbjct: 56  LVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYT 115

Query: 475 RSKQALGRACGVSRPIISCSITINEGSQLKPQIQTIQQEIERL 603
            S+  LG A GV R  ++  +  NE  + K     +++E+  L
Sbjct: 116 PSRADLGAAMGVKRGTVALLVRQNE--EYKDLYDEVKEELSAL 156


>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 22/54 (40%), Positives = 33/54 (61%)
 Frame = +1

Query: 337 GAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFVRSKQALGR 498
           G    TK + +  ++L+++A D +PLE+VL +P LC    VPY  V+ K  LGR
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGR 197


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 22/54 (40%), Positives = 33/54 (61%)
 Frame = +1

Query: 337 GAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFVRSKQALGR 498
           G    TK + +  ++L+++A D +PLE+VL +P LC    VPY  V+ K  LGR
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGR 197


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 22/54 (40%), Positives = 33/54 (61%)
 Frame = +1

Query: 337 GAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFVRSKQALGR 498
           G    TK + +  ++L+++A D +PLE+VL +P LC    VPY  V+ K  LGR
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGR 197


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 22/54 (40%), Positives = 33/54 (61%)
 Frame = +1

Query: 337 GAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFVRSKQALGR 498
           G    TK + +  ++L+++A D +PLE+VL +P LC    VPY  V+ K  LGR
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGR 197


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 22/54 (40%), Positives = 33/54 (61%)
 Frame = +1

Query: 337 GAXXATKXLNRGLSELIIMAADAEPLEIVLHIPILCEXKNVPYVFVRSKQALGR 498
           G    TK + +  ++L+++A D +PLE+VL +P LC    VPY  V+ K  LGR
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGR 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,210,695
Number of Sequences: 53049
Number of extensions: 493437
Number of successful extensions: 2658
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2595
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6886109490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)