Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_B12
         (1167 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   5.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   5.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   5.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   5.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   7.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   7.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 930 CTKCRYXCVXQSL 968
           C KC Y CV +S+
Sbjct: 261 CNKCDYTCVNKSM 273


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 930 CTKCRYXCVXQSL 968
           C KC Y CV +S+
Sbjct: 19  CNKCDYTCVNKSM 31


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -1

Query: 756 HISLIIPWLYIQNNIRLCN*HWLFSFLCIICSKTLFLYLSCFST-LLF 616
           H+    P++    +  LC  ++ ++F+ ++C    +     F+  LLF
Sbjct: 82  HLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 548 FSD*IQSEVILLDDSKVSTRTCRLMTKLR 462
           F+D IQ E I LDD+++ +   R    L+
Sbjct: 112 FADLIQLEQIHLDDNRIESLERRAFMNLK 140


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 782 QSALMASCGVPLN*CLWLMVSISCKFPVLLK--MIRFLLIGLL 904
           +S   ASC       LW  +    K P+L+K  +++ L+I L+
Sbjct: 386 KSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRLLQTLIISLV 428


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 782 QSALMASCGVPLN*CLWLMVSISCKFPVLLK--MIRFLLIGLL 904
           +S   ASC       LW  +    K P+L+K  +++ L+I L+
Sbjct: 386 KSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRLLQTLIISLV 428


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,105
Number of Sequences: 336
Number of extensions: 3834
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34022010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)