Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_B09
         (1239 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537972-1|CAD97936.1|  345|Homo sapiens hypothetical protein pr...    66   2e-10
BC084545-1|AAH84545.1|  296|Homo sapiens LYSMD4 protein protein.       47   1e-04
BC033515-1|AAH33515.1|  215|Homo sapiens LysM, putative peptidog...    47   1e-04
AY125955-1|AAM94507.1|  215|Homo sapiens putative peptidoglycan ...    47   1e-04
BC031649-1|AAH31649.1|  227|Homo sapiens LysM, putative peptidog...    46   4e-04
AL592424-6|CAI16380.1|  227|Homo sapiens LysM, putative peptidog...    46   4e-04
BC073134-1|AAH73134.1|  505|Homo sapiens KIAA1787 protein protein.     33   2.1  
AL136870-1|CAB66804.1| 1514|Homo sapiens hypothetical protein pr...    33   2.1  
AB058690-1|BAB47416.1| 1564|Homo sapiens KIAA1787 protein protein.     33   2.1  

>BX537972-1|CAD97936.1|  345|Homo sapiens hypothetical protein
           protein.
          Length = 345

 Score = 66.1 bits (154), Expect = 2e-10
 Identities = 27/53 (50%), Positives = 41/53 (77%)
 Frame = +2

Query: 341 VQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPVTPYSVLTELI 499
           +QEGDTL AIAL++ C++A++KR+N +  D + FA R+IK+PV  +S LTE +
Sbjct: 108 IQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFSSLTETL 160


>BC084545-1|AAH84545.1|  296|Homo sapiens LYSMD4 protein protein.
          Length = 296

 Score = 47.2 bits (107), Expect = 1e-04
 Identities = 14/55 (25%), Positives = 39/55 (70%)
 Frame = +2

Query: 329 IEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPVTPYSVLTE 493
           ++ ++ + D+L  +AL++ C +A++K++N   ++ +++A +++K+PV  + +L E
Sbjct: 74  LQRELAQEDSLNKLALQYGCKVADIKKVNNFIREQDLYALKSVKIPVRNHGILME 128


>BC033515-1|AAH33515.1|  215|Homo sapiens LysM, putative
           peptidoglycan-binding, domain containing 2 protein.
          Length = 215

 Score = 47.2 bits (107), Expect = 1e-04
 Identities = 19/50 (38%), Positives = 36/50 (72%)
 Frame = +2

Query: 320 EHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 469
           E  +E +V+ GDTLQ IAL++  ++ ++KR N++  ++ IF ++T+ +PV
Sbjct: 68  ERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLNIPV 117


>AY125955-1|AAM94507.1|  215|Homo sapiens putative peptidoglycan
           binding domain protein-like protein protein.
          Length = 215

 Score = 47.2 bits (107), Expect = 1e-04
 Identities = 19/50 (38%), Positives = 36/50 (72%)
 Frame = +2

Query: 320 EHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 469
           E  +E +V+ GDTLQ IAL++  ++ ++KR N++  ++ IF ++T+ +PV
Sbjct: 68  ERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLNIPV 117


>BC031649-1|AAH31649.1|  227|Homo sapiens LysM, putative
           peptidoglycan-binding, domain containing 1 protein.
          Length = 227

 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 16/51 (31%), Positives = 37/51 (72%)
 Frame = +2

Query: 317 QEHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 469
           +E  +E Q++ GDTL  +AL++  ++ ++KR N+++ ++ IF ++T+ +P+
Sbjct: 36  RERRLEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86


>AL592424-6|CAI16380.1|  227|Homo sapiens LysM, putative
           peptidoglycan-binding, domain containing 1 protein.
          Length = 227

 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 16/51 (31%), Positives = 37/51 (72%)
 Frame = +2

Query: 317 QEHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 469
           +E  +E Q++ GDTL  +AL++  ++ ++KR N+++ ++ IF ++T+ +P+
Sbjct: 36  RERRLEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86


>BC073134-1|AAH73134.1|  505|Homo sapiens KIAA1787 protein protein.
          Length = 505

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 526 FNLETNAKIDTATLTKQWHTAVTSKQFTAKR 618
           FNL  N +++  TLTK+WH A       A R
Sbjct: 342 FNLRVNPRLEAGTLTKKWHMAYHGSNVAAVR 372


>AL136870-1|CAB66804.1| 1514|Homo sapiens hypothetical protein
            protein.
          Length = 1514

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 526  FNLETNAKIDTATLTKQWHTAVTSKQFTAKR 618
            FNL  N +++  TLTK+WH A       A R
Sbjct: 1351 FNLRVNPRLEAGTLTKKWHMAYHGSNVAAVR 1381


>AB058690-1|BAB47416.1| 1564|Homo sapiens KIAA1787 protein protein.
          Length = 1564

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 526  FNLETNAKIDTATLTKQWHTAVTSKQFTAKR 618
            FNL  N +++  TLTK+WH A       A R
Sbjct: 1401 FNLRVNPRLEAGTLTKKWHMAYHGSNVAAVR 1431


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,910,922
Number of Sequences: 237096
Number of extensions: 2224337
Number of successful extensions: 4860
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4860
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17614793600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)