Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_B08
         (1242 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        32   5.0  
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     32   5.0  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    32   5.0  

>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
 Frame = +2

Query: 740 PXPXXPXXPXXVXXSXXXKXLAPXXGXXXEXPXXPHRXG-XXPVTXGXDPPPGXXGDSXP 916
           P P  P  P            AP      E P  P   G   P      PPPG  G   P
Sbjct: 126 PPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPP 185

Query: 917 PPXXP 931
           PP  P
Sbjct: 186 PPPPP 190


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
 Frame = +2

Query: 740 PXPXXPXXPXXVXXSXXXKXLAPXXGXXXEXPXXPHRXG-XXPVTXGXDPPPGXXGDSXP 916
           P P  P  P            AP      E P  P   G   P      PPPG  G   P
Sbjct: 544 PPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPP 603

Query: 917 PPXXP 931
           PP  P
Sbjct: 604 PPPPP 608


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
 Frame = +2

Query: 740 PXPXXPXXPXXVXXSXXXKXLAPXXGXXXEXPXXPHRXG-XXPVTXGXDPPPGXXGDSXP 916
           P P  P  P            AP      E P  P   G   P      PPPG  G   P
Sbjct: 435 PPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPP 494

Query: 917 PPXXP 931
           PP  P
Sbjct: 495 PPPPP 499


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,617,325
Number of Sequences: 237096
Number of extensions: 2004651
Number of successful extensions: 4425
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4022
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17669839830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)