Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_B07
(1233 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 172 1e-41
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 79 3e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 67 8e-10
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 62 2e-08
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 53 2e-05
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 45 0.004
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 41 0.057
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 39 0.23
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 37 1.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 172 bits (419), Expect = 1e-41
Identities = 83/117 (70%), Positives = 84/117 (71%)
Frame = +2
Query: 632 SKXPXTVKXPXXXXFXIGXAPLTSXXKIDAQXXGGXTRQDXKXTRXFPLKAPSXALLFRP 811
SK T F IG APLTS KIDAQ GG TRQD K TR FPL+APS ALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 812 CRLPDTCPPFSLREAWRFLIAHAVGISXRCRSXAPXWXVCTXPXXSPTGGPYXVXIV 982
CRLPDTCPPFSLREAWRFLIAHAVGIS RCRS AP W VCT P SPT PY V IV
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIV 118
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 78.6 bits (185), Expect = 3e-13
Identities = 54/112 (48%), Positives = 57/112 (50%)
Frame = +2
Query: 488 GALPFPRSLTRXARSFGXGXXXQXTQXX*YGXPXNXGITQEKTCXQXASKXPXTVKXPXX 667
G +P PRSLTR ARSFG G + T G E T + SK P
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEEIR---PRR 81
Query: 668 XXFXIGXAPLTSXXKIDAQXXGGXTRQDXKXTRXFPLKAPSXALLFRPCRLP 823
F IG APLTS K DAQ GG TRQD K R FPL APS ALLF P LP
Sbjct: 82 SRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 67.3 bits (157), Expect = 8e-10
Identities = 34/54 (62%), Positives = 35/54 (64%)
Frame = +2
Query: 650 VKXPXXXXFXIGXAPLTSXXKIDAQXXGGXTRQDXKXTRXFPLKAPSXALLFRP 811
V+ P F IG APLTS K DAQ GG TRQD K TR FPL APS ALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 62.5 bits (145), Expect = 2e-08
Identities = 33/75 (44%), Positives = 40/75 (53%)
Frame = -3
Query: 997 PGXXXXDXYXIRXXXRAXXGXXAHXPXWSXRPTPX*DTYSVSYEKAPRFPKGERRTGIR* 818
PG D Y RA G A+ P WS RP P DT SVSYEKAPRFPKG++ +
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV-- 65
Query: 817 TAGSEQESXRGSFQG 773
+G Q R + +G
Sbjct: 66 -SGKRQGRNRRAHEG 79
Score = 43.2 bits (97), Expect = 0.014
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -1
Query: 843 EKGGQVSGKRQGRNRRAHEGAFRGKXLVXLXSCRVXPP 730
+K QVSGKRQGRNRRAHEGA K L PP
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPP 97
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 52.8 bits (121), Expect = 2e-05
Identities = 31/82 (37%), Positives = 34/82 (41%)
Frame = +2
Query: 734 GXTRQDXKXTRXFPLKAPSXALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISXRCRSXA 913
G TRQD K P P PPFSL + + GIS RCRS A
Sbjct: 26 GETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFA 85
Query: 914 PXWXVCTXPXXSPTGGPYXVXI 979
P W V P SPT PY V +
Sbjct: 86 PSWAVSKNPPFSPTAAPYPVTV 107
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 52.4 bits (120), Expect = 2e-05
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +1
Query: 823 GYLSAFLPSGSVALSHSSRCRYLXXV 900
GYLSAFLPSGSVALSHSSRCRYL V
Sbjct: 12 GYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 45.2 bits (102), Expect = 0.004
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2
Query: 584 PXNXGITQEKTCXQXASKXPXTVKXPXXXXFXIGXAPLTSXXKIDAQXXGGXTRQDXKXT 763
P N I ++ + + + P T F PLT+ KI Q T+ + K T
Sbjct: 39 PRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYT 98
Query: 764 RXFPLKAPSXALLFRP 811
FPL++PS +LLF P
Sbjct: 99 TPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 41.1 bits (92), Expect = 0.057
Identities = 18/34 (52%), Positives = 18/34 (52%)
Frame = -3
Query: 997 PGXXXXDXYXIRXXXRAXXGXXAHXPXWSXRPTP 896
PG D Y IR RA G AH P WS RPTP
Sbjct: 8 PGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 39.1 bits (87), Expect = 0.23
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -3
Query: 997 PGXXXXDXYXIRXXXRAXXGXXAHXPXWSXRPTPX*DT 884
PG + Y IR RA G A+ P WS RPTP DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 36.7 bits (81), Expect = 1.2
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +1
Query: 535 RXXXXVSXHSXXVIRXSTXSGDNAGKN 615
R VS HS VIR ST SGDNAGKN
Sbjct: 32 RLRRAVSAHSKAVIRLSTESGDNAGKN 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,047,543
Number of Sequences: 1657284
Number of extensions: 6011428
Number of successful extensions: 9655
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9645
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 124315585013
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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