Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_B05
(1226 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein. 37 0.13
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 37 0.13
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 37 0.13
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 37 0.13
S44195-1|AAB23327.1| 62|Homo sapiens agrin protein. 34 0.92
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 34 0.92
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 33 2.8
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 33 2.8
BC040029-1|AAH40029.1| 298|Homo sapiens SMARCA2 protein protein. 33 2.8
AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix... 33 2.8
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 33 2.8
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 33 2.8
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 33 2.8
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 33 2.8
Y07921-1|CAA69226.1| 480|Homo sapiens novel serine protease, PR... 32 3.7
D87258-1|BAA13322.1| 480|Homo sapiens serin protease with IGF-b... 32 3.7
BC011352-1|AAH11352.1| 445|Homo sapiens HTRA1 protein protein. 32 3.7
AF157623-1|AAD41525.1| 480|Homo sapiens HTRA serine protease pr... 32 3.7
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 32 4.9
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 32 4.9
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 32 4.9
AK095564-1|BAC04575.1| 175|Homo sapiens protein ( Homo sapiens ... 31 8.5
>BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein.
Length = 719
Score = 37.1 bits (82), Expect = 0.13
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 399 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 539
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 104 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 146
Score = 34.7 bits (76), Expect = 0.69
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 381 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 539
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 184 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 232
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 37.1 bits (82), Expect = 0.13
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 399 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 539
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 622 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 664
Score = 34.7 bits (76), Expect = 0.69
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 381 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 539
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 702 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 750
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 37.1 bits (82), Expect = 0.13
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 399 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 539
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 603 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 645
Score = 34.7 bits (76), Expect = 0.69
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 381 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 539
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 683 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 731
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 37.1 bits (82), Expect = 0.13
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 399 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 539
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 622 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 664
Score = 34.7 bits (76), Expect = 0.69
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 381 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 539
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 702 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 750
>S44195-1|AAB23327.1| 62|Homo sapiens agrin protein.
Length = 62
Score = 34.3 bits (75), Expect = 0.92
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 399 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCREST 509
RC PP GPVC D T+ + CEL +C + T
Sbjct: 23 RCEHPPHGPVCGSDGV----TYGSACELREAACLQQT 55
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 34.3 bits (75), Expect = 0.92
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 285 IPTRLGSVKEV-SAPDMRAPGELVRARVREGVPPPLCAGRCVAPPAGPV 428
+P R S K S P+ AP E + R R +PPP +G +PPA P+
Sbjct: 475 VPPRPASPKVTRSPPETAAPVEDMARRTRPTMPPPQVSGSRSSPPAPPL 523
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 430 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 296
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 430 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 296
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>BC040029-1|AAH40029.1| 298|Homo sapiens SMARCA2 protein protein.
Length = 298
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 430 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 296
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 559
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 430 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 296
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 430 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 296
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 430 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 296
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 430 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 296
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 430 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 296
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>Y07921-1|CAA69226.1| 480|Homo sapiens novel serine protease,
PRSS11 protein.
Length = 480
Score = 32.3 bits (70), Expect = 3.7
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 393 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 500
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>D87258-1|BAA13322.1| 480|Homo sapiens serin protease with
IGF-binding motif protein.
Length = 480
Score = 32.3 bits (70), Expect = 3.7
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 393 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 500
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>BC011352-1|AAH11352.1| 445|Homo sapiens HTRA1 protein protein.
Length = 445
Score = 32.3 bits (70), Expect = 3.7
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 393 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 500
AG CV + PVC D A T+A LC+L A S R
Sbjct: 72 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 103
>AF157623-1|AAD41525.1| 480|Homo sapiens HTRA serine protease
protein.
Length = 480
Score = 32.3 bits (70), Expect = 3.7
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 393 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 500
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 31.9 bits (69), Expect = 4.9
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 487 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 323
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 31.9 bits (69), Expect = 4.9
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 487 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 323
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 31.9 bits (69), Expect = 4.9
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 487 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 323
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>AK095564-1|BAC04575.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ38245 fis, clone FCBBF2007186. ).
Length = 175
Score = 31.1 bits (67), Expect = 8.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 470 SSECPRRSGCIKGAHWSCRRGHAPP 396
S CP R+G ++ WS R G APP
Sbjct: 27 SCPCPGRAGSLRTPTWSMRLGQAPP 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,187,119
Number of Sequences: 237096
Number of extensions: 3267442
Number of successful extensions: 10562
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 9078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10494
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17394608680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -