Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_B02
         (1147 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   4.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   5.7  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   5.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 74  HSWXPGCHKFAASQQL 121
           H W P C K ++++QL
Sbjct: 234 HIWSPNCDKLSSTEQL 249


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 74  HSWXPGCHKFAASQQL 121
           H W P C K ++++QL
Sbjct: 467 HIWSPNCDKLSSTEQL 482


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 74  HSWXPGCHKFAASQQL 121
           H W P C K ++++QL
Sbjct: 467 HIWSPNCDKLSSTEQL 482


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 511 KKCFICEICDAIALFVTIISCNKQVN 588
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 534 NFTNKAFFSLH 502
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 534 NFTNKAFFSLH 502
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,167
Number of Sequences: 336
Number of extensions: 3764
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33300331
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)