BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_B01
(1191 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023673-1|AAY85073.1| 156|Drosophila melanogaster IP04450p pro... 169 5e-42
AE013599-194|AAF57371.1| 156|Drosophila melanogaster CG15908-PA... 169 5e-42
BT029108-1|ABJ17041.1| 327|Drosophila melanogaster IP14812p pro... 32 1.3
AY157148-1|AAN71718.1| 285|Drosophila melanogaster small conduc... 32 1.3
AY157147-1|AAN71717.1| 285|Drosophila melanogaster small conduc... 32 1.3
AY119529-1|AAM50183.1| 522|Drosophila melanogaster GH16664p pro... 32 1.3
AE014298-735|AAN09137.1| 519|Drosophila melanogaster CG10706-PD... 32 1.3
AE014298-734|AAF46030.2| 573|Drosophila melanogaster CG10706-PE... 32 1.3
AE014298-732|AAF46027.3| 809|Drosophila melanogaster CG10706-PB... 32 1.3
AE014298-731|AAF46029.3| 809|Drosophila melanogaster CG10706-PA... 32 1.3
AE014298-730|AAS65264.1| 924|Drosophila melanogaster CG10706-PF... 32 1.3
AE014298-729|AAN09136.2| 924|Drosophila melanogaster CG10706-PC... 32 1.3
>BT023673-1|AAY85073.1| 156|Drosophila melanogaster IP04450p
protein.
Length = 156
Score = 169 bits (412), Expect = 5e-42
Identities = 74/145 (51%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Frame = +1
Query: 331 SNTTESQLEDKWMIRNCDIYEDEYDECTSFRARFHQYFIFGETLDCNQWKKDYDNCCKWE 510
S+ ++ L+D W IR C +Y++EYD+CTSF+ARFHQYFIFG+ DC+QW DY NC +++
Sbjct: 12 SDKSKESLDDAWAIRPCHLYKEEYDDCTSFKARFHQYFIFGKDTDCSQWLTDYRNCERYQ 71
Query: 511 SK--KDVKAAEALINSEKTRRLERLKGHYNNSIWKKRSAPPANWDKPLPEWMSKRDENTY 684
DV A +A+I SE+ RR RL+ H+ N W+KR PP +W PLP+WM KR+ENTY
Sbjct: 72 QSNGNDVAAGKAVIKSEEERRRIRLRAHFANDTWQKRKKPPLDWAAPLPDWMEKRNENTY 131
Query: 685 LALKAKEF--REGNVKEEKSFCSIM 753
L LK KE + EE+S C+IM
Sbjct: 132 LELKQKELSGQAAPQGEERSLCTIM 156
>AE013599-194|AAF57371.1| 156|Drosophila melanogaster CG15908-PA
protein.
Length = 156
Score = 169 bits (412), Expect = 5e-42
Identities = 74/145 (51%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Frame = +1
Query: 331 SNTTESQLEDKWMIRNCDIYEDEYDECTSFRARFHQYFIFGETLDCNQWKKDYDNCCKWE 510
S+ ++ L+D W IR C +Y++EYD+CTSF+ARFHQYFIFG+ DC+QW DY NC +++
Sbjct: 12 SDKSKESLDDAWAIRPCHLYKEEYDDCTSFKARFHQYFIFGKDTDCSQWLTDYRNCERYQ 71
Query: 511 SK--KDVKAAEALINSEKTRRLERLKGHYNNSIWKKRSAPPANWDKPLPEWMSKRDENTY 684
DV A +A+I SE+ RR RL+ H+ N W+KR PP +W PLP+WM KR+ENTY
Sbjct: 72 QSNGNDVAAGKAVIKSEEERRRIRLRAHFANDTWQKRKKPPLDWAAPLPDWMEKRNENTY 131
Query: 685 LALKAKEF--REGNVKEEKSFCSIM 753
L LK KE + EE+S C+IM
Sbjct: 132 LELKQKELSGQAAPQGEERSLCTIM 156
>BT029108-1|ABJ17041.1| 327|Drosophila melanogaster IP14812p
protein.
Length = 327
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 217 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 264
>AY157148-1|AAN71718.1| 285|Drosophila melanogaster small
conductance calcium-activatedpotassium channel SK splice
variant 6b protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 138 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 185
>AY157147-1|AAN71717.1| 285|Drosophila melanogaster small
conductance calcium-activatedpotassium channel SK splice
variant 6a protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 138 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 185
>AY119529-1|AAM50183.1| 522|Drosophila melanogaster GH16664p
protein.
Length = 522
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 215 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 262
>AE014298-735|AAN09137.1| 519|Drosophila melanogaster CG10706-PD,
isoform D protein.
Length = 519
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 212 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 259
>AE014298-734|AAF46030.2| 573|Drosophila melanogaster CG10706-PE,
isoform E protein.
Length = 573
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 212 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 259
>AE014298-732|AAF46027.3| 809|Drosophila melanogaster CG10706-PB,
isoform B protein.
Length = 809
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 617 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 664
>AE014298-731|AAF46029.3| 809|Drosophila melanogaster CG10706-PA,
isoform A protein.
Length = 809
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 617 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 664
>AE014298-730|AAS65264.1| 924|Drosophila melanogaster CG10706-PF,
isoform F protein.
Length = 924
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 617 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 664
>AE014298-729|AAN09136.2| 924|Drosophila melanogaster CG10706-PC,
isoform C protein.
Length = 924
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 767 YIICHIML--QKLF---SSFTFPSLNSLAFNARYVFSSLFDIHSGNGL 639
Y+IC +ML KLF SS + +LN + FN R+V +L I G L
Sbjct: 617 YLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVL 664
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,000,578
Number of Sequences: 53049
Number of extensions: 487730
Number of successful extensions: 1552
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6332107740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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