Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_A22
(1150 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 564 e-161
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 564 e-161
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 564 e-161
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 562 e-160
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 531 e-151
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 531 e-151
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 526 e-150
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 524 e-149
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 520 e-148
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 520 e-148
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 520 e-148
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 506 e-143
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 491 e-139
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 485 e-137
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 462 e-130
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 448 e-126
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 272 3e-73
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 272 3e-73
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 269 2e-72
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 267 1e-71
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 267 1e-71
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 266 3e-71
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 207 1e-53
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 207 1e-53
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 144 1e-34
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 144 1e-34
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.88
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 6.2
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 6.2
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 6.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin MEC-12
protein.
Length = 450
Score = 564 bits (1393), Expect = e-161
Identities = 260/326 (79%), Positives = 281/326 (86%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDLTEF TNLVPYPRIHFPL T++PVISA YHEQ SV EI N C P N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHN 300
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PRHG + G P+
Sbjct: 301 QMVKCDPRHGKYMAVCLLFRGDVVPK 326
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 564 bits (1393), Expect = e-161
Identities = 260/326 (79%), Positives = 281/326 (86%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDLTEF TNLVPYPRIHFPL T++PVISA YHEQ SV EI N C P N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHN 300
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PRHG + G P+
Sbjct: 301 QMVKCDPRHGKYMAVCLLFRGDVVPK 326
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 564 bits (1393), Expect = e-161
Identities = 260/326 (79%), Positives = 281/326 (86%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDLTEF TNLVPYPRIHFPL T++PVISA YHEQ SV EI N C P N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHN 300
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PRHG + G P+
Sbjct: 301 QMVKCDPRHGKYMAVCLLFRGDVVPK 326
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 562 bits (1388), Expect = e-160
Identities = 259/325 (79%), Positives = 280/325 (86%)
Frame = +1
Query: 139 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 318
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 319 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 678
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 679 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 858
VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITAS
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITAS 240
Query: 859 LRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPANQ 1038
LRFDGALNVDLTEF TNLVPYPRIHFPL T++PVISA YHEQ SV EI N C P NQ
Sbjct: 241 LRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQ 300
Query: 1039 MXKXXPRHGXVNGLXYXVPGXXXPR 1113
M K PRHG + G P+
Sbjct: 301 MVKCDPRHGKYMAVCLLFRGDVVPK 325
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 531 bits (1311), Expect = e-151
Identities = 244/326 (74%), Positives = 272/326 (83%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDL EF TNLVPYPRIHFPL Y P+ISA YHE SV +I N+C PAN
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPAN 298
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PRHG + G P+
Sbjct: 299 QMVKCDPRHGKYMAVCLLYRGDVVPK 324
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 531 bits (1311), Expect = e-151
Identities = 244/326 (74%), Positives = 272/326 (83%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDL EF TNLVPYPRIHFPL Y P+ISA YHE SV +I N+C PAN
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPAN 298
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PRHG + G P+
Sbjct: 299 QMVKCDPRHGKYMAVCLLYRGDVVPK 324
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical protein
F26E4.8 protein.
Length = 449
Score = 526 bits (1299), Expect = e-150
Identities = 241/326 (73%), Positives = 271/326 (83%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDL EF TNLVPYPRIHFPL Y P+ISA YHE SV +I N+C PAN
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPAN 298
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PRHG + G P+
Sbjct: 299 QMVKCDPRHGKYMAVCLLYRGDVVPK 324
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 524 bits (1294), Expect = e-149
Identities = 240/326 (73%), Positives = 270/326 (82%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDL EF TNLVPYPRIHFPL Y P+ISA YHE SV +I N+C PAN
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPAN 298
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PRHG + G P+
Sbjct: 299 QMVKCDPRHGKYMAVCLLYRGDVVPK 324
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 520 bits (1284), Expect = e-148
Identities = 238/326 (73%), Positives = 271/326 (83%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDL EF TNLVPYPRIHFPL +Y P+ISA YHE SV +I N+C PAN
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPAN 298
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PR+G + G P+
Sbjct: 299 QMVKCDPRNGKYMAVCLLYRGDVVPK 324
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 520 bits (1284), Expect = e-148
Identities = 237/327 (72%), Positives = 266/327 (81%)
Frame = +1
Query: 133 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 312
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 313 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 492
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 493 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 672
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQVST
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 673 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 852
++VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLD+ RPTYTNLNRLI Q++SS+T
Sbjct: 185 SMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVT 244
Query: 853 ASLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPA 1032
ASLRFDGALNVDLTEF TNLVPYPRIHFPL TYAP+ISA YHEQ +V EI C P
Sbjct: 245 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPG 304
Query: 1033 NQMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PR G G P+
Sbjct: 305 AQMVKCDPRRGKYMACCLLYRGDVVPK 331
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 520 bits (1284), Expect = e-148
Identities = 238/326 (73%), Positives = 271/326 (83%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDL EF TNLVPYPRIHFPL +Y P+ISA YHE SV +I N+C PAN
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPAN 298
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PR+G + G P+
Sbjct: 299 QMVKCDPRNGKYMAVCLLYRGDVVPK 324
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical protein
F16D3.1 protein.
Length = 447
Score = 506 bits (1248), Expect = e-143
Identities = 228/326 (69%), Positives = 267/326 (81%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
+VEPYNS+LTTHTTLEHSDC+F++DNEAIY+I + NL + PTYT+LNRL+ Q+VSSITA
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITA 240
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDLTEF TNLVPYPRIHFPLVTYAP+ISA YHEQ SV EI N C P +
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGS 300
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K PR+G G P+
Sbjct: 301 QMVKCDPRNGKYMACCLLYRGDVVPK 326
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical protein
F32H2.9 protein.
Length = 464
Score = 491 bits (1212), Expect = e-139
Identities = 226/325 (69%), Positives = 259/325 (79%)
Frame = +1
Query: 139 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 318
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 319 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 678
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQVST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 679 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 858
VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSITAS
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITAS 247
Query: 859 LRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPANQ 1038
LRF+GALNVDLTEF TNLVPYPRIHFPLVTYAP++SA HEQ +V ++ +AC P Q
Sbjct: 248 LRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQ 307
Query: 1039 MXKXXPRHGXVNGLXYXVPGXXXPR 1113
M K PR G + G P+
Sbjct: 308 MVKCDPRRGKYMAVCLLYRGDVVPK 332
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical protein
T28D6.2 protein.
Length = 444
Score = 485 bits (1196), Expect = e-137
Identities = 225/326 (69%), Positives = 257/326 (78%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL + RPTY NLNR+I Q+VSSITA
Sbjct: 178 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITA 237
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
SLRFDGALNVDL EF TNLVPYPRIHFPLV Y P+IS+ +HE SV EI +C +N
Sbjct: 238 SLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLISS--AHHEFLSVDEITKSCFEASN 295
Query: 1036 QMXKXXPRHGXVNGLXYXVPGXXXPR 1113
QM K P+HG + G P+
Sbjct: 296 QMVKCDPKHGKYMAVCLLYRGDVVPK 321
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical protein
ZK899.4 protein.
Length = 452
Score = 462 bits (1140), Expect = e-130
Identities = 213/325 (65%), Positives = 250/325 (76%)
Frame = +1
Query: 139 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 318
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 319 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 678
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQVST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 679 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 858
VEPYNSILTTHTTLE SDC+FMVDNEAIYD+CR+ L +ERP+Y+NLNRLI Q+VSSITAS
Sbjct: 185 VEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITAS 244
Query: 859 LRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPANQ 1038
LRFDGALNVDL EF TNLVPYPRIHFPL TYAPVISA +HE SV +I + C ANQ
Sbjct: 245 LRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQ 304
Query: 1039 MXKXXPRHGXVNGLXYXVPGXXXPR 1113
M K P G + G P+
Sbjct: 305 MVKCDPSAGKYMAVCLLYRGDVVPK 329
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 448 bits (1103), Expect = e-126
Identities = 206/304 (67%), Positives = 239/304 (78%)
Frame = +1
Query: 202 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 381
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 382 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 561
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 562 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 741
LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 742 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFXTNLVPY 921
MVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSITASLRF+GALNVDLTEF TNLVPY
Sbjct: 181 MVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPY 240
Query: 922 PRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPANQMXKXXPRHGXVNGLXYXVPGX 1101
PRIHFPLVTYAP++SA HEQ +V ++ +AC P QM K PR G + G
Sbjct: 241 PRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGD 300
Query: 1102 XXPR 1113
P+
Sbjct: 301 VVPK 304
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 272 bits (667), Expect = 3e-73
Identities = 129/310 (41%), Positives = 183/310 (59%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
LRF G LN DL + N+VP+PR+HF + +AP+ S + +V E+ C N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKN 298
Query: 1036 QMXKXXPRHG 1065
M PRHG
Sbjct: 299 MMAACDPRHG 308
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 272 bits (667), Expect = 3e-73
Identities = 129/310 (41%), Positives = 183/310 (59%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
LRF G LN DL + N+VP+PR+HF + +AP+ S + +V E+ C N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKN 298
Query: 1036 QMXKXXPRHG 1065
M PRHG
Sbjct: 299 MMAACDPRHG 308
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical protein
C54C6.2 protein.
Length = 444
Score = 269 bits (660), Expect = 2e-72
Identities = 129/310 (41%), Positives = 182/310 (58%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTT 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
LRF G LN DL + N+VP+PR+HF + +AP+ + + +V E+ N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKN 298
Query: 1036 QMXKXXPRHG 1065
M PRHG
Sbjct: 299 MMAACDPRHG 308
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical protein
B0272.1 protein.
Length = 444
Score = 267 bits (654), Expect = 1e-71
Identities = 127/310 (40%), Positives = 179/310 (57%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+P+VS
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTT 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
LRF G LN DL + N+VP+PR+HF + +AP+ S + +V E+ N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKN 298
Query: 1036 QMXKXXPRHG 1065
M PRHG
Sbjct: 299 MMAACDPRHG 308
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical protein
C36E8.5 protein.
Length = 450
Score = 267 bits (654), Expect = 1e-71
Identities = 128/310 (41%), Positives = 183/310 (59%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
LRF G LN DL + N+VP+PR+HF + +AP+ + + +V E+ N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKN 298
Query: 1036 QMXKXXPRHG 1065
M PRHG
Sbjct: 299 MMAACDPRHG 308
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 266 bits (651), Expect = 3e-71
Identities = 127/310 (40%), Positives = 183/310 (59%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
LRF G LN DL + N+VP+PR+HF + +AP+ + + +V E+ N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKN 298
Query: 1036 QMXKXXPRHG 1065
M PRHG
Sbjct: 299 MMAACDPRHG 308
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 207 bits (505), Expect = 1e-53
Identities = 111/276 (40%), Positives = 159/276 (57%), Gaps = 1/276 (0%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSIT 852
VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L +S IT
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
Query: 853 ASLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPV 960
RF G L D+ + N PR+HF + ++APV
Sbjct: 239 TFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPV 272
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 207 bits (505), Expect = 1e-53
Identities = 111/276 (40%), Positives = 159/276 (57%), Gaps = 1/276 (0%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSIT 852
VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L +S IT
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
Query: 853 ASLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPV 960
RF G L D+ + N PR+HF + ++APV
Sbjct: 239 TFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPV 272
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 144 bits (348), Expect = 1e-34
Identities = 88/308 (28%), Positives = 151/308 (49%), Gaps = 4/308 (1%)
Frame = +1
Query: 148 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 327
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 328 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDR 498
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 675
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ TA
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
RF+ A+ + +L P+P +HF +PV+ + + SV ++ P +
Sbjct: 244 PYRFNSAMCPSIR--YLDLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTS 301
Query: 1036 QMXKXXPR 1059
M R
Sbjct: 302 MMVSTASR 309
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 144 bits (348), Expect = 1e-34
Identities = 88/308 (28%), Positives = 151/308 (49%), Gaps = 4/308 (1%)
Frame = +1
Query: 148 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 327
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 328 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDR 498
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 675
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ TA
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 856 SLRFDGALNVDLTEFXTNLVPYPRIHFPLVTYAPVISAXXXYHEQXSVXEIXNACXXPAN 1035
RF+ A+ + +L P+P +HF +PV+ + + SV ++ P +
Sbjct: 244 PYRFNSAMCPSIR--YLDLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTS 301
Query: 1036 QMXKXXPR 1059
M R
Sbjct: 302 MMVSTASR 309
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.88
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 164 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 319
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 178 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 357
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 358 VDE 366
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 178 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 357
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 358 VDE 366
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 178 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 357
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 358 VDE 366
DE
Sbjct: 116 ADE 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,640,320
Number of Sequences: 27780
Number of extensions: 501565
Number of successful extensions: 1302
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3119902942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -