Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_A19
         (1209 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical pr...   256   2e-68
AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical ...   148   7e-36
AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical...    33   0.54 
Z32683-6|CAA83623.1|  728|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z81077-4|CAB03071.3|  618|Caenorhabditis elegans Hypothetical pr...    29   8.7  
Z50874-1|CAA90763.1|  377|Caenorhabditis elegans Hypothetical pr...    29   8.7  

>Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical
           protein K07C5.4 protein.
          Length = 486

 Score =  256 bits (628), Expect = 2e-68
 Identities = 130/261 (49%), Positives = 178/261 (68%), Gaps = 4/261 (1%)
 Frame = +2

Query: 128 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 307
           +VL+EH+AG+AL ++ EF++    L +V+ +  D  +F+ +V L +F P K+   ALEN 
Sbjct: 7   FVLYEHAAGYALMKIKEFDDAGLILQEVDAAHADGYKFSQIVELASFDPFKNTEAALENC 66

Query: 308 NAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEAL-EIQCTHTGAVPEI 484
           N++SEG+   DL  FL+  LPK+KK     LG+ D KL  +++EA  +++    G + EI
Sbjct: 67  NSISEGLAHPDLTNFLQKSLPKKKKH--VVLGINDSKLAGSLTEAFPDLKLVFGGVITEI 124

Query: 485 LRGIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKD 664
           LRG R HF  L K L   + S AQL LGHSYSR++VKF+VHRVDNM+IQSIALLDQLDKD
Sbjct: 125 LRGTRVHFERLAKNLPHHSLSKAQLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKD 184

Query: 665 VNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFIKDRKTLCE-ESLE-PLTEIL-GDS 835
           +N F MRIREWYSYH+PEL  + P+ + Y++ A  I DR  + E E+LE  + EIL  DS
Sbjct: 185 INLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAENENLENEILEILDNDS 244

Query: 836 EKAQAIVDASKMSMGMDIHQL 898
           EK   I++A++ SMGMDI  L
Sbjct: 245 EKTAQIIEAARTSMGMDISDL 265



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = +1

Query: 877  GNGYSPVDLINIQMFAGRVVALSNYRKQISEYLA**DEXXXTEFGLXXL-EIKLEPGLIS 1053
            G   S +DL NI+ FA RV +L  YR+Q+ EY+   D        L  L   ++   LIS
Sbjct: 259  GMDISDLDLENIKRFAARVSSLMEYRQQLHEYIK--DRMDHCAPSLSALIGEQVGARLIS 316

Query: 1054 XXGSLXTSPSIRHXHXXNWGXKKXPFRALK 1143
              GSL              G +K  FRALK
Sbjct: 317  HAGSLTNLAKYPASTVQILGAEKALFRALK 346


>AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical
            protein W01B11.3 protein.
          Length = 487

 Score =  148 bits (359), Expect = 7e-36
 Identities = 88/293 (30%), Positives = 161/293 (54%)
 Frame = +2

Query: 131  VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 310
            VLFE +AG+A+F+++  ++L   +  + E  +  ++    + L++F+  K+   A+E  +
Sbjct: 3    VLFEVAAGYAVFKLSNEKKLKN-VDNIWEEFSTAEKAQENLQLVSFKKFKTTAGAVEATS 61

Query: 311  AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 490
             ++EG L + L   L+  + + +K     L V D KLG  I E L + C H  ++ E++R
Sbjct: 62   EITEGKLSKTLKKLLKSSVDETEK-----LAVGDAKLGNLIKEKLSLNCVHDSSINELMR 116

Query: 491  GIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVN 670
            G+R H   L+     +  +   L + HS +R +VKFN  ++D MI+Q+++LLD LDK++N
Sbjct: 117  GVRAHIEDLLAEHK-EEMNAMNLAVAHSLARYKVKFNPEKIDTMIVQAVSLLDDLDKELN 175

Query: 671  TFSMRIREWYSYHFPELVSIVPENHLYTKCAEFIKDRKTLCEESLEPLTEILGDSEKAQA 850
             + MR+REWY +HFPEL   + ++  Y K  + I  R+  C  +   L+ IL + E  + 
Sbjct: 176  NYVMRVREWYGWHFPELGKTIQDHQAYAKIIKAIGMRQN-CINT--DLSSILPE-ELEEK 231

Query: 851  IVDASKMSMGMDIHQLT*LTSKCLLAE**HSAIIENRFQNTWHSKMNXVXPNL 1009
            + + +++SMG DI  +  +  K L  +    +    +  +   ++M  + PNL
Sbjct: 232  VKEDAEISMGTDISDIDLIHIKGLCDQVIELSAYRAQLFDYLKNRMTALAPNL 284


>AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical
            protein Y110A7A.8 protein.
          Length = 504

 Score = 32.7 bits (71), Expect = 0.54
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
 Frame = +2

Query: 620  MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFIKDRKTLCEE 799
            +I++   +   +D ++N     +R+ Y   FPEL ++VP    Y    + +   +   + 
Sbjct: 101  LIVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLL-GNEINSKV 159

Query: 800  SLEPLTEILGDSE-KAQAIVDASKMSMGMDIHQLT*LTSKCLLAE**HSAIIENRFQNTW 976
              E L  IL  S     ++  ++   + ++ ++L  +   C LA   H   +E      W
Sbjct: 160  VKEQLGGILDASTCMVVSVTVSTTQGVKLEPNELETVMDACNLAAQLHVNRLEMHQLVEW 219

Query: 977  HSKMNXVXPNLV 1012
              +M  + PNLV
Sbjct: 220  --RMALIAPNLV 229


>Z32683-6|CAA83623.1|  728|Caenorhabditis elegans Hypothetical
           protein R07E5.8 protein.
          Length = 728

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +2

Query: 752 TKCAEFIKDRKTLC-EESLEPLTEILGDSEKAQAIVDASKMSM 877
           +KC EF +  K L  EE  EP  E+L + EK+   +D+S++SM
Sbjct: 672 SKCDEFNELLKKLKDEEDFEPFAEVLSE-EKSCNPIDSSEVSM 713


>Z81077-4|CAB03071.3|  618|Caenorhabditis elegans Hypothetical
           protein F36A2.4 protein.
          Length = 618

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 746 LYTKCAEFIKDRKTLCEESLEPLTEILGDSEKAQAIVDASKM 871
           L+ KC E+ + RK   E   +PL  + GD E  + I+D  ++
Sbjct: 185 LWNKCLEWKRKRKG--EVEADPLQPMFGDDENEEEILDRVRL 224


>Z50874-1|CAA90763.1|  377|Caenorhabditis elegans Hypothetical
           protein R10E4.1 protein.
          Length = 377

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 779 RKTLCEESLEPLTEILGDSEKAQAIVDASKMSMGMDIHQLT*LTSKC 919
           R+ + ++SL+ L + L D  + Q IVDA +M M    H+    T KC
Sbjct: 210 RQPVTKKSLDYLLQ-LADRYQCQPIVDACEMFMCAHYHEYQKKTEKC 255


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,295,988
Number of Sequences: 27780
Number of extensions: 539919
Number of successful extensions: 1250
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)