Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_A11
(1181 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC694.04c |||conserved eukaryotic protein|Schizosaccharomyces ... 136 4e-33
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 32 0.18
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 30 0.54
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 29 1.7
SPBC6B1.12c |sus1||SAGA complex subunit Sus1 |Schizosaccharomyce... 28 2.2
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 28 2.9
SPBC13G1.02 |||mannose-1-phosphate guanyltransferase |Schizosacc... 27 5.1
SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|ch... 27 5.1
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 27 6.7
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 26 8.9
>SPAC694.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 136 bits (330), Expect = 4e-33
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
Frame = +2
Query: 350 MKIGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKR 529
+KI TH G FH DE LA +ML+ L ++ A+I+R+RD L+ CDI+VDVG +D K
Sbjct: 5 VKIATHSGTFHADEALAVYMLRRLDRFSGAQIVRSRDPQVLDSCDIIVDVGGKYD-GIKY 63
Query: 530 YDHHQAGFNETLSTLRPELGDSYKIKLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLI 709
+DHHQ FN+T S Y +LSSAGL+Y ++G ++I + + + +DL+ +
Sbjct: 64 FDHHQREFNDTFS-------PKYSTRLSSAGLIYKHFGREVIHAVLPQ-LKINEQDLETL 115
Query: 710 YKKVYESFIQEIDAIDNGIPMTEE--QPKYDIHTHLSNRVKRLNPEWNSTQETNVD--EF 877
Y+KVY+SF++ +DA DNGI +P + L V P WNS ++ + E
Sbjct: 116 YEKVYQSFVEGLDANDNGISAYPAGLKPSFKAAMSLPEMVSSFLPAWNSEKQDDQTYLEC 175
Query: 878 FNKAMALV 901
F KA L+
Sbjct: 176 FQKASDLM 183
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 31.9 bits (69), Expect = 0.18
Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +2
Query: 677 TSLTNEDLKLIYKKVYESFIQEIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLNPEWNSTQ 856
T+ +N+ L+ + K Y +++++ D + K + + N++ L+ + ++
Sbjct: 506 TAWSNDPLEEKWSKFYVDLLEKLEKFDEALEFASAISKGKVSIYNKNKILELSKKTAKSK 565
Query: 857 ETNVDEFFN----KAMALVSEDSYI 919
N+D+FF MA+V D I
Sbjct: 566 VWNLDDFFTIEIPHMMAVVPHDDGI 590
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 30.3 bits (65), Expect = 0.54
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Frame = +2
Query: 413 KNLPQYKDAEIIRTRDLNKLNDC-DIVVDVGSVF---DHEKKRYDHHQAGFNETLSTLRP 580
KNL D +I TR +N + IV DV + DH++ YD H++ F +
Sbjct: 115 KNLASEMD--VINTRIVNPTGELLKIVKDVDKLLLKRDHKQLDYDRHRSSFKKLQEKKDK 172
Query: 581 ELGDSYKI-----KLSSAGLVYAYYGEDIIQQL 664
L D K+ + Y YY E + ++L
Sbjct: 173 SLKDEKKLYEAETAFEQSSQEYEYYNEMLKEEL 205
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 803 THLSNRVKR-LNPEWNSTQETNVDE 874
TH + +K+ LNP WN T E NV +
Sbjct: 42 THTTTAIKKTLNPYWNETFEVNVTD 66
>SPBC6B1.12c |sus1||SAGA complex subunit Sus1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 108
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 659 QLKEESTSLTNEDLKLIYKKVYESFIQE-IDAIDNGIPM 772
QL++ + + N D K+ ++K+YES +Q ++I + + M
Sbjct: 44 QLRDYTRGIVNSDSKIDFQKLYESALQSATESIPDSVKM 82
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.9 bits (59), Expect = 2.9
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Frame = +2
Query: 554 NETLSTLRPELGDSYKIKLSSAGLVYAYYGEDIIQQLK-EESTS------LTNEDLKLIY 712
NE + PEL S I SS + ED++ + EESTS L L Y
Sbjct: 641 NEEMVIPTPELDASSAIPSSSIS-----HDEDLLPRKNTEESTSSSSFSSLITSPASLQY 695
Query: 713 KK--VYESFIQEIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLNPEWN 847
+ +S + E++ + +P + DIH + ++ V N E+N
Sbjct: 696 DENPFKQSVVAELNNNSSSVPFVDSAHASDIHAYDNDHVSTKNKEFN 742
>SPBC13G1.02 |||mannose-1-phosphate guanyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 414
Score = 27.1 bits (57), Expect = 5.1
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Frame = +2
Query: 461 LNKLNDCDIVVDVGSVFDHEKKRYDHHQAGFNETLSTLRPELGDSYKIKL--------SS 616
L+ + C I + S+FD KK Y+ + L +L + D ++ S
Sbjct: 177 LSNIISCGIYIFDASIFDEIKKAYERRLEEVEKQLRSLDEGMEDYLSLETDVLAPLCSDS 236
Query: 617 AGLVYAYYGEDIIQQLKEESTSLTNEDLKL 706
+ +YAY + +Q+K +++ L L
Sbjct: 237 SKAIYAYNTPEFWRQIKTAGSAVPANSLYL 266
>SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 388
Score = 27.1 bits (57), Expect = 5.1
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +2
Query: 653 IQQLKEESTSLTNEDLK-LIYKKVYESF---IQEIDAIDNGIPMTEEQPKYDIHTHLSNR 820
I + E+ N DL+ L KK S I+ I +D T Q + D +TH+ N
Sbjct: 139 INSILEKYLRFLNPDLQELSDKKAVSSTQKPIKTIGKVDLSNKSTSNQDQVD-NTHVQNS 197
Query: 821 VKRLNPEWNSTQETNVDEFFNKAMA 895
+N + + D+ NK+M+
Sbjct: 198 TDGVNQDTGMILDNTEDKEINKSMS 222
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 519 SWSKTLPTSTTISQSFSLFRSLV 451
SW+ T P+ SF LFRSL+
Sbjct: 1578 SWATTCPSRRLACNSFQLFRSLL 1600
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 26.2 bits (55), Expect = 8.9
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -1
Query: 542 GDDHNASFHGQKHFLHQQLYHSHSAYLDLLCG*SQHLCIEEDSLA*SKLELHRSGILRRE 363
G A+ + QK+ QQL + + +LL ++ LC++ D L S E S IL +
Sbjct: 664 GTLEEATSYYQKNTELQQLLKQNESASELLKSRNEKLCVDYDKLR-SVFEEDSSKILSLQ 722
Query: 362 SQSSSLK 342
++ +L+
Sbjct: 723 KENENLQ 729
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,105,298
Number of Sequences: 5004
Number of extensions: 83926
Number of successful extensions: 247
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 635506058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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