Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_A11
         (1181 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0345 - 28142434-28142658,28143087-28143158,28143252-281433...   169   3e-42
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162...    31   1.8  
02_02_0707 + 13144147-13144788,13145115-13148663                       29   5.4  
10_08_0444 + 17971724-17971797,17972119-17972176,17972613-179727...    29   9.5  
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440...    29   9.5  

>02_05_0345 -
           28142434-28142658,28143087-28143158,28143252-28143371,
           28143483-28143674,28144919-28145017,28145448-28145594,
           28146310-28146513
          Length = 352

 Score =  169 bits (412), Expect = 3e-42
 Identities = 83/190 (43%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
 Frame = +2

Query: 353 KIGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRY 532
           ++GTH+G FHCDE L C++++   Q+  A+++RTRD   L+  D V+DVG V+D  + RY
Sbjct: 31  RVGTHNGSFHCDEALGCYLIRLTSQFAGADVVRTRDPQILDTLDAVLDVGGVYDPSRHRY 90

Query: 533 DHHQAGFNETLSTLRPELGDSYKIKLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIY 712
           DHHQ GFNE         G  +  KLSSAGLVY ++G++II   KE   S  +ED+  +Y
Sbjct: 91  DHHQKGFNEV-------FGHGFNTKLSSAGLVYKHFGKEII--AKELEVSEDHEDVHRLY 141

Query: 713 KKVYESFIQEIDAIDNGIPM--TEEQPKYDIHTHLSNRVKRLNPEWNSTQETNVDE--FF 880
             +Y+SF++ +DA+DNGI    T++ PKY  +THLS+RV RLNP+W    ++   E   F
Sbjct: 142 LAIYKSFVEALDAVDNGINQYDTDQPPKYVNNTHLSSRVGRLNPDWTDPDQSPEKENAAF 201

Query: 881 NKAMALVSED 910
            +AM L   +
Sbjct: 202 QQAMMLAGSE 211


>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
            1625603-1625887,1626016-1626030,1626339-1626419,
            1626909-1627322,1627423-1627719,1627801-1629864
          Length = 3057

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +2

Query: 467  KLNDCDIVVDVGSVFDHEKKRYDHHQAGFNETLSTLRPELGDSYKI 604
            K +  D + +VG+   HE    + H A   +TLS + P+ G++ K+
Sbjct: 2668 KASQEDALEEVGTELPHESLHENRHGAKDEQTLSLIEPDTGNAEKL 2713


>02_02_0707 + 13144147-13144788,13145115-13148663
          Length = 1396

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +2

Query: 194  TLNNEFYNLIKYNVTYRNITYVMLNRILPRTCSLLNSASYNFRHYC 331
            TLNN    ++ +   + +IT+++ + ++P  C+L+  A +   H C
Sbjct: 992  TLNNRDRIVLLWQGVFEHITHIVQSTVMP--CNLVEKAVFGLLHIC 1035


>10_08_0444 +
           17971724-17971797,17972119-17972176,17972613-17972708,
           17972974-17973000,17973019-17973075,17973604-17973687,
           17974304-17974384,17974928-17975071,17975218-17975309,
           17975998-17976079,17976818-17977000,17977360-17977438,
           17977555-17977613,17978162-17978290,17979188-17979367,
           17980312-17980446,17980528-17980602,17980890-17980947,
           17981035-17981282,17981594-17981733,17981961-17982132,
           17982797-17982887,17983099-17983221,17984951-17985032,
           17985715-17985835,17985886-17985915,17986427-17986549
          Length = 940

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +2

Query: 374 VFHCDEVLACF-MLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRYDHHQAG 550
           + H + V +C  +L  +   K A +    D N+L++C  ++  GS  +     Y  HQ  
Sbjct: 597 LMHNEVVTSCSNLLAGMEILKAAMVQLLNDYNRLSECVKIIPGGSTLNRNLPYYGVHQVH 656

Query: 551 F 553
           F
Sbjct: 657 F 657


>06_01_0609 +
           4404287-4405023,4405496-4405631,4405724-4405876,
           4405985-4406128,4406224-4406375,4406453-4406552,
           4406653-4406775,4406876-4407037,4407190-4407247,
           4407324-4407502,4408294-4408402,4408567-4408637,
           4408891-4408986,4409727-4409803,4410983-4411066,
           4411473-4411607,4411744-4411819,4413072-4413167,
           4413580-4413671,4413745-4413868,4413966-4414052
          Length = 996

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +2

Query: 674 STSLTNEDLKLIYKKVYESFIQEI-DAIDNGIPMTEEQPKYDIHTHLSNRVKRLNPEWNS 850
           +  L + +++ I +  Y    +E  DA D G  +   + +YDIH H   R+  ++ E   
Sbjct: 284 TNDLADIEMETILRHCYVMSPKEFKDASDQGDDVFYCEYEYDIHWHNFKRLADIDDE-PE 342

Query: 851 TQETNVDEFFNKAMALVSE 907
           T+E   DE +N     VS+
Sbjct: 343 TKEDPGDEPYNAGNDYVSD 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,025,240
Number of Sequences: 37544
Number of extensions: 446029
Number of successful extensions: 1053
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3619930760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)