Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_A11
         (1181 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83113-8|CAB05549.1|  340|Caenorhabditis elegans Hypothetical pr...   196   3e-50
Z81042-6|CAB02797.1|  340|Caenorhabditis elegans Hypothetical pr...   196   3e-50
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    33   0.52 
Z78062-1|CAB01495.1|  447|Caenorhabditis elegans Hypothetical pr...    29   6.4  
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr...    29   8.5  
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr...    29   8.5  
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ...    29   8.5  

>Z83113-8|CAB05549.1|  340|Caenorhabditis elegans Hypothetical
           protein C27H6.8 protein.
          Length = 340

 Score =  196 bits (478), Expect = 3e-50
 Identities = 93/185 (50%), Positives = 122/185 (65%)
 Frame = +2

Query: 356 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRYD 535
           IGTH G FHCDE  ACFMLK LPQ+KD  I+RTRD  +L  CDI+VDVG +FDH K+RYD
Sbjct: 5   IGTHSGKFHCDEAFACFMLKQLPQFKDHSILRTRDAAQLEKCDIIVDVGGIFDHSKQRYD 64

Query: 536 HHQAGFNETLSTLRPELGDSYKIKLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIYK 715
           HHQ GF +T+ TL      ++  KLSSAGLVYA+YG ++I Q+   + S +  D  L Y 
Sbjct: 65  HHQRGFTDTMRTLEKL---NFDTKLSSAGLVYAHYGREVINQILGGNVSSSMID--LFYH 119

Query: 716 KVYESFIQEIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLNPEWNSTQETNVDEFFNKAMA 895
           ++YE F++ IDAIDNGI   +  P+Y    +LS+R  + N  WN   E + DE F +AM 
Sbjct: 120 RLYEQFVESIDAIDNGISQYDGVPRYHSSGNLSSRTGQFNSHWNE-PENDADERFQQAMQ 178

Query: 896 LVSED 910
            + E+
Sbjct: 179 FIGEE 183


>Z81042-6|CAB02797.1|  340|Caenorhabditis elegans Hypothetical
           protein C27H6.8 protein.
          Length = 340

 Score =  196 bits (478), Expect = 3e-50
 Identities = 93/185 (50%), Positives = 122/185 (65%)
 Frame = +2

Query: 356 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRYD 535
           IGTH G FHCDE  ACFMLK LPQ+KD  I+RTRD  +L  CDI+VDVG +FDH K+RYD
Sbjct: 5   IGTHSGKFHCDEAFACFMLKQLPQFKDHSILRTRDAAQLEKCDIIVDVGGIFDHSKQRYD 64

Query: 536 HHQAGFNETLSTLRPELGDSYKIKLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIYK 715
           HHQ GF +T+ TL      ++  KLSSAGLVYA+YG ++I Q+   + S +  D  L Y 
Sbjct: 65  HHQRGFTDTMRTLEKL---NFDTKLSSAGLVYAHYGREVINQILGGNVSSSMID--LFYH 119

Query: 716 KVYESFIQEIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLNPEWNSTQETNVDEFFNKAMA 895
           ++YE F++ IDAIDNGI   +  P+Y    +LS+R  + N  WN   E + DE F +AM 
Sbjct: 120 RLYEQFVESIDAIDNGISQYDGVPRYHSSGNLSSRTGQFNSHWNE-PENDADERFQQAMQ 178

Query: 896 LVSED 910
            + E+
Sbjct: 179 FIGEE 183


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
            protein W09B6.1a protein.
          Length = 2054

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 419  LPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKR 529
            L +  DAEI++ R  N LN+C +V  + +++  EK R
Sbjct: 1396 LTEISDAEILKKRSANALNNCGMVAWIMTLYTPEKPR 1432


>Z78062-1|CAB01495.1|  447|Caenorhabditis elegans Hypothetical
           protein F16D3.1 protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 185 CVETLNNE-FYNLIKYNVTYRNITYVMLNRILPRTCSLLNSASYNF 319
           C   ++NE  Y + K N+  R+ TY  LNR+L +  S + +AS  F
Sbjct: 200 CSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSI-TASLRF 244


>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical protein
            ZC247.1 protein.
          Length = 4404

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 797  IHTHLSNRVKRLNPE-WNSTQETNVDEFFNKAMALVSED 910
            IH+H S R +RL+P  W + +ET+   +  +     S D
Sbjct: 4153 IHSHSSPRQRRLSPHTWTTVRETSEVSYIKRVTVTSSTD 4191


>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical protein
            ZC247.1 protein.
          Length = 4404

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 797  IHTHLSNRVKRLNPE-WNSTQETNVDEFFNKAMALVSED 910
            IH+H S R +RL+P  W + +ET+   +  +     S D
Sbjct: 4153 IHSHSSPRQRRLSPHTWTTVRETSEVSYIKRVTVTSSTD 4191


>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
            protein ZC247.1 protein.
          Length = 4404

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 797  IHTHLSNRVKRLNPE-WNSTQETNVDEFFNKAMALVSED 910
            IH+H S R +RL+P  W + +ET+   +  +     S D
Sbjct: 4153 IHSHSSPRQRRLSPHTWTTVRETSEVSYIKRVTVTSSTD 4191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,015,612
Number of Sequences: 27780
Number of extensions: 440457
Number of successful extensions: 1196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)