Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_A11
         (1181 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    24   3.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   5.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   5.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   6.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   6.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   9.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   9.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   9.1  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 413 LA*SKLELHRSGILRRESQSSSLKYLTNSNDENYMMQN 300
           LA  + + + +G+ R  S SS     TN+ND++Y  QN
Sbjct: 344 LARKQFQKNTTGLERSRSWSSLDN--TNTNDQDYSSQN 379


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = +2

Query: 203 NEFYNLIKYNVTYRNITYVMLNRILPRTCSLLNSASYNFRHY 328
           NEF  L+K+ +  R   + M+N+ +     +L    Y+ + +
Sbjct: 78  NEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLYSAKTF 119


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = +2

Query: 203 NEFYNLIKYNVTYRNITYVMLNRILPRTCSLLNSASYNFRHY 328
           NEF  L+K+ +  R   + M+N+ +     +L    Y+ + +
Sbjct: 78  NEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLYSAKTF 119


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
 Frame = +2

Query: 599 KIKLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIYKKVYES--FIQEIDAIDNGIPM 772
           + K+S   ++ A Y  + +QQ  E+   L  + +   Y + YE   F+ E D +   I +
Sbjct: 82  RTKMSLQLVLAALYPPNKLQQWNED---LNWQPIATKYLRRYEDNIFLPE-DCLLFTIEL 137

Query: 773 TE--EQPKYDIHTHLSNRVKRLNPEWNSTQETNVDEFFNKAMALVSEDSY 916
               E P+        +++K+   EW     T   +++     LV+E SY
Sbjct: 138 DRVLESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQSY 187


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
 Frame = +2

Query: 599 KIKLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIYKKVYES--FIQEIDAIDNGIPM 772
           + K+S   ++ A Y  + +QQ  E+   L  + +   Y + YE   F+ E D +   I +
Sbjct: 97  RTKMSLQLVLAALYPPNKLQQWNED---LNWQPIATKYLRRYEDNIFLPE-DCLLFTIEL 152

Query: 773 TE--EQPKYDIHTHLSNRVKRLNPEWNSTQETNVDEFFNKAMALVSEDSY 916
               E P+        +++K+   EW     T   +++     LV+E SY
Sbjct: 153 DRVLESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQSY 202


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 743 IDAIDNGIPMTEEQPKYDIHT 805
           +DAID+G  + E   K DI+T
Sbjct: 337 MDAIDSGYLIDEYGKKIDIYT 357


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 743 IDAIDNGIPMTEEQPKYDIHT 805
           +DAID+G  + E   K DI+T
Sbjct: 337 MDAIDSGYLIDEYGKKIDIYT 357


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 595 AVSEFRPQGTQGLIKTGLVMIIT 527
           ++S  +  GT+G+ K+G V++ T
Sbjct: 186 SISYVKDDGTEGIAKSGDVLVET 208


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,664
Number of Sequences: 438
Number of extensions: 5877
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40247334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)