Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_A10
         (1241 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0527 + 3915670-3915821,3916866-3917054,3917477-3917582           97   3e-20
07_01_0525 + 3904388-3904390,3904485-3904645,3905347-3905394,390...    95   8e-20
03_06_0283 - 32832572-32832677,32833343-32833531,32833582-328337...    95   8e-20
07_01_0531 + 3928833-3928867,3930848-3930943,3931873-3931978           75   1e-13
03_05_0839 + 28097780-28097878,28098573-28098782,28099196-28099372     37   0.029
01_07_0179 - 41814886-41815074,41815172-41815222,41815365-418154...    31   1.9  

>07_01_0527 + 3915670-3915821,3916866-3917054,3917477-3917582
          Length = 148

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 41/84 (48%), Positives = 59/84 (70%)
 Frame = +3

Query: 276 LXKRXXXXXXXXVXKIXTLMSXPXQYXLPAWFLNRQKXIVXGKYSQLTSSNLDSKLREAL 455
           + KR        + ++ T+++ P Q+ +P WFLNR+K    G++SQ+ S+ LD KLR+ L
Sbjct: 48  MNKRAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDL 107

Query: 456 EXLKQLRAHRGMRHYWGLRVRGQH 527
           E LK++R HRG+RHYWGLRVRGQH
Sbjct: 108 ERLKKIRNHRGLRHYWGLRVRGQH 131


>07_01_0525 +
           3904388-3904390,3904485-3904645,3905347-3905394,
           3905714-3905902,3906872-3906977
          Length = 168

 Score = 95.5 bits (227), Expect = 8e-20
 Identities = 39/70 (55%), Positives = 55/70 (78%)
 Frame = +3

Query: 318 KIXTLMSXPXQYXLPAWFLNRQKXIVXGKYSQLTSSNLDSKLREALEXLKQLRAHRGMRH 497
           ++ T+++ P Q+ +P WFLNR+K    G++SQ+ S+ LD KLR+ LE LK++R HRG+RH
Sbjct: 82  RLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRH 141

Query: 498 YWGLRVRGQH 527
           YWGLRVRGQH
Sbjct: 142 YWGLRVRGQH 151


>03_06_0283 -
           32832572-32832677,32833343-32833531,32833582-32833796,
           32833900-32833902
          Length = 170

 Score = 95.5 bits (227), Expect = 8e-20
 Identities = 39/70 (55%), Positives = 55/70 (78%)
 Frame = +3

Query: 318 KIXTLMSXPXQYXLPAWFLNRQKXIVXGKYSQLTSSNLDSKLREALEXLKQLRAHRGMRH 497
           ++ T+++ P Q+ +P WFLNR+K    G++SQ+ S+ LD KLR+ LE LK++R HRG+RH
Sbjct: 84  RLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRH 143

Query: 498 YWGLRVRGQH 527
           YWGLRVRGQH
Sbjct: 144 YWGLRVRGQH 153


>07_01_0531 + 3928833-3928867,3930848-3930943,3931873-3931978
          Length = 78

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +3

Query: 363 AWFL-NRQKXIVXGKYSQLTSSNLDSKLREALEXLKQLRAHRGMRHYWGLRVRGQH 527
           +W L  R+K    G++SQ+ S+ LD KLR+ LE LK++R HRG+RHYWGLRVRGQH
Sbjct: 6   SWILPERKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 61


>03_05_0839 + 28097780-28097878,28098573-28098782,28099196-28099372
          Length = 161

 Score = 37.1 bits (82), Expect = 0.029
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 444 REALEXLKQLRAHRGMRHYWGLRVRGQ 524
           R A+E LK++R +RG+RH  GL VRGQ
Sbjct: 108 RVAIERLKEIRCYRGIRHKLGLPVRGQ 134


>01_07_0179 -
           41814886-41815074,41815172-41815222,41815365-41815469,
           41815852-41815945,41816056-41816150,41816581-41816700,
           41816737-41816832,41817272-41817569,41817777-41817853,
           41818932-41819447
          Length = 546

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 454 WXGSSSFALTEGCDITGAFVCVVSTLRLLAGEEELL 561
           W   S FA+  G D+   F+ +  T  LLA EE LL
Sbjct: 212 WQEESCFAIGAGTDVANLFISIKRTQLLLATEEWLL 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,335,667
Number of Sequences: 37544
Number of extensions: 156014
Number of successful extensions: 362
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3829445508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)