Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_A04
(1211 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 9e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 9e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 9e-04
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.006
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 39 0.008
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 36 0.076
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 36 0.076
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 36 0.076
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 36 0.076
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 36 0.076
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 36 0.076
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 36 0.076
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 36 0.076
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 36 0.076
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 36 0.076
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.10
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 35 0.10
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 35 0.13
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 35 0.13
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 35 0.13
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 34 0.18
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 34 0.18
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.23
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.23
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 34 0.23
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.31
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 33 0.41
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 33 0.41
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.54
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.54
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.71
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 0.71
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.71
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 32 0.71
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 32 0.71
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.2
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 31 1.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.6
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.6
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.6
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.6
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.2
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 31 2.2
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 31 2.2
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 30 2.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.9
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 30 2.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.9
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 30 2.9
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 30 2.9
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 30 3.8
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 30 3.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 3.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 3.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 3.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.8
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 30 3.8
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 30 3.8
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 30 3.8
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 30 3.8
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 3.8
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 5.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.0
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 29 5.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.6
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 6.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 6.6
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 6.6
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 6.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.6
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 8.7
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 8.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 8.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 8.7
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 8.7
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 8.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 8.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 8.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 8.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 9.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.9 bits (94), Expect = 9e-04
Identities = 34/116 (29%), Positives = 36/116 (31%)
Frame = -3
Query: 1182 GXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGX 1003
G PP PPPP G PPPPPP P PP G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPI---TGGPPPPPPPGGLPPITGGPPP------PPPPGGL 751
Query: 1002 PKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPPXVLXPRF 835
P PP P PP P PP F G P PP P + P +
Sbjct: 752 PPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 803
Score = 33.5 bits (73), Expect = 0.31
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXX 985
PP PPPP G PPPPPP P PP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP--PPPPGMF 793
Query: 984 PPXFPQKXXFXPP 946
P P + PP
Sbjct: 794 APMAPVIPDYLPP 806
Score = 32.3 bits (70), Expect = 0.71
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 1162 PXKXXPPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
P PP PP GG PPPPPP PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PPG G P P G P + G P P PPG P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 823 PPXXKTGG*NP 855
PP GG P
Sbjct: 776 PPGGFKGGPPP 786
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/76 (30%), Positives = 25/76 (32%)
Frame = +1
Query: 670 GGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXPPPXXKTGG* 849
GG P P G P + G P P PPG + G PPP GG
Sbjct: 711 GGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 850 NPXGXGFPFXGGXXGP 897
P P G GP
Sbjct: 769 PPPPPPPPPGGFKGGP 784
Score = 28.7 bits (61), Expect = 8.7
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = -3
Query: 1020 PPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGA----PXXPPKXEXPPPX 853
PP G P PP P P P PP P PP PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 852 VLXPRFXXGGGXXPRNXGL 796
P GG P G+
Sbjct: 774 PPPPGGFKGGPPPPPPPGM 792
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.9 bits (94), Expect = 9e-04
Identities = 34/116 (29%), Positives = 36/116 (31%)
Frame = -3
Query: 1182 GXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGX 1003
G PP PPPP G PPPPPP P PP G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPI---TGGPPPPPPPGGLPPITGGPPP------PPPPGGL 751
Query: 1002 PKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPPXVLXPRF 835
P PP P PP P PP F G P PP P + P +
Sbjct: 752 PPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 803
Score = 33.5 bits (73), Expect = 0.31
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXX 985
PP PPPP G PPPPPP P PP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP--PPPPGMF 793
Query: 984 PPXFPQKXXFXPP 946
P P + PP
Sbjct: 794 APMAPVIPDYLPP 806
Score = 32.3 bits (70), Expect = 0.71
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 1162 PXKXXPPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
P PP PP GG PPPPPP PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PPG G P P G P + G P P PPG P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 823 PPXXKTGG*NP 855
PP GG P
Sbjct: 776 PPGGFKGGPPP 786
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/76 (30%), Positives = 25/76 (32%)
Frame = +1
Query: 670 GGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXPPPXXKTGG* 849
GG P P G P + G P P PPG + G PPP GG
Sbjct: 711 GGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 850 NPXGXGFPFXGGXXGP 897
P P G GP
Sbjct: 769 PPPPPPPPPGGFKGGP 784
Score = 28.7 bits (61), Expect = 8.7
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = -3
Query: 1020 PPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGA----PXXPPKXEXPPPX 853
PP G P PP P P P PP P PP PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 852 VLXPRFXXGGGXXPRNXGL 796
P GG P G+
Sbjct: 774 PPPPGGFKGGPPPPPPPGM 792
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.9 bits (94), Expect = 9e-04
Identities = 34/116 (29%), Positives = 36/116 (31%)
Frame = -3
Query: 1182 GXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGX 1003
G PP PPPP G PPPPPP P PP G
Sbjct: 284 GGSSALPPITGGPPPPPGLPPI---TGGPPPPPPPGGLPPITGGPPP------PPPPGGL 334
Query: 1002 PKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPPXVLXPRF 835
P PP P PP P PP F G P PP P + P +
Sbjct: 335 PPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 386
Score = 33.5 bits (73), Expect = 0.31
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXX 985
PP PPPP G PPPPPP P PP P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP--PPPPGMF 376
Query: 984 PPXFPQKXXFXPP 946
P P + PP
Sbjct: 377 APMAPVIPDYLPP 389
Score = 32.3 bits (70), Expect = 0.71
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 1162 PXKXXPPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
P PP PP GG PPPPPP PP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PPG G P P G P + G P P PPG P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 823 PPXXKTGG*NP 855
PP GG P
Sbjct: 359 PPGGFKGGPPP 369
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/76 (30%), Positives = 25/76 (32%)
Frame = +1
Query: 670 GGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXPPPXXKTGG* 849
GG P P G P + G P P PPG + G PPP GG
Sbjct: 294 GGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 351
Query: 850 NPXGXGFPFXGGXXGP 897
P P G GP
Sbjct: 352 PPPPPPPPPGGFKGGP 367
Score = 28.7 bits (61), Expect = 8.7
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = -3
Query: 1020 PPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGA----PXXPPKXEXPPPX 853
PP G P PP P P P PP P PP PPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 852 VLXPRFXXGGGXXPRNXGL 796
P GG P G+
Sbjct: 357 PPPPGGFKGGPPPPPPPGM 375
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.1 bits (87), Expect = 0.006
Identities = 30/99 (30%), Positives = 31/99 (31%)
Frame = -3
Query: 1095 PPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPP 916
PPPPPP K P PP G P P PP G P PP
Sbjct: 237 PPPPPPP----KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 915 XXFFXFGAPXXPPKXEXPPPXVLXPRFXXGGGXXPRNXG 799
G+P PP PP P GG P G
Sbjct: 293 RA----GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 327
Score = 34.3 bits (75), Expect = 0.18
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXX 985
PP PPPP G PPPPPP P SPP G
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG--SPPPAGTGSPPPP 332
Query: 984 PPXFPQKXXFXPPLFXXGFPXPP 916
P Q PP PP
Sbjct: 333 PRQKRQAPERSPPTGSPPTGSPP 355
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPK 997
PP+ PPP G G PPPPP R + P SPP P+
Sbjct: 314 PPQAGGSPPPAGTGS--------PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPR 361
Score = 29.5 bits (63), Expect = 5.0
Identities = 34/135 (25%), Positives = 39/135 (28%), Gaps = 11/135 (8%)
Frame = -3
Query: 1182 GXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPP----PPXXRXKKKXXPXXXXXXFFSPP 1015
G P PPPP PPPP PP R P PP
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPP 284
Query: 1014 XXG---XPKXXXXPPXFPQK----XXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPP 856
G P+ PP P + PP G P P G+P PP+ + P
Sbjct: 285 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT----GSPPPPPRQKRQAP 340
Query: 855 XVLXPRFXXGGGXXP 811
P G P
Sbjct: 341 ERSPPTGSPPTGSPP 355
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.1 bits (87), Expect = 0.006
Identities = 30/99 (30%), Positives = 31/99 (31%)
Frame = -3
Query: 1095 PPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPP 916
PPPPPP K P PP G P P PP G P PP
Sbjct: 258 PPPPPPP----KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 915 XXFFXFGAPXXPPKXEXPPPXVLXPRFXXGGGXXPRNXG 799
G+P PP PP P GG P G
Sbjct: 314 RA----GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 348
Score = 34.3 bits (75), Expect = 0.18
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXX 985
PP PPPP G PPPPPP P SPP G
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG--SPPPAGTGSPPPP 353
Query: 984 PPXFPQKXXFXPPLFXXGFPXPP 916
P Q PP PP
Sbjct: 354 PRQKRQAPERSPPTGSPPTGSPP 376
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPK 997
PP+ PPP G G PPPPP R + P SPP P+
Sbjct: 335 PPQAGGSPPPAGTGS--------PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPR 382
Score = 29.5 bits (63), Expect = 5.0
Identities = 34/135 (25%), Positives = 39/135 (28%), Gaps = 11/135 (8%)
Frame = -3
Query: 1182 GXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPP----PPXXRXKKKXXPXXXXXXFFSPP 1015
G P PPPP PPPP PP R P PP
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPP 305
Query: 1014 XXG---XPKXXXXPPXFPQK----XXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPP 856
G P+ PP P + PP G P P G+P PP+ + P
Sbjct: 306 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT----GSPPPPPRQKRQAP 361
Query: 855 XVLXPRFXXGGGXXP 811
P G P
Sbjct: 362 ERSPPTGSPPTGSPP 376
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.1 bits (87), Expect = 0.006
Identities = 30/99 (30%), Positives = 31/99 (31%)
Frame = -3
Query: 1095 PPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPP 916
PPPPPP K P PP G P P PP G P PP
Sbjct: 243 PPPPPPP----KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 915 XXFFXFGAPXXPPKXEXPPPXVLXPRFXXGGGXXPRNXG 799
G+P PP PP P GG P G
Sbjct: 299 RA----GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 333
Score = 34.3 bits (75), Expect = 0.18
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXX 985
PP PPPP G PPPPPP P SPP G
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG--SPPPAGTGSPPPP 338
Query: 984 PPXFPQKXXFXPPLFXXGFPXPP 916
P Q PP PP
Sbjct: 339 PRQKRQAPERSPPTGSPPTGSPP 361
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPK 997
PP+ PPP G G PPPPP R + P SPP P+
Sbjct: 320 PPQAGGSPPPAGTGS--------PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPR 367
Score = 29.5 bits (63), Expect = 5.0
Identities = 34/135 (25%), Positives = 39/135 (28%), Gaps = 11/135 (8%)
Frame = -3
Query: 1182 GXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPP----PPXXRXKKKXXPXXXXXXFFSPP 1015
G P PPPP PPPP PP R P PP
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPP 290
Query: 1014 XXG---XPKXXXXPPXFPQK----XXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPP 856
G P+ PP P + PP G P P G+P PP+ + P
Sbjct: 291 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT----GSPPPPPRQKRQAP 346
Query: 855 XVLXPRFXXGGGXXP 811
P G P
Sbjct: 347 ERSPPTGSPPTGSPP 361
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 38.7 bits (86), Expect = 0.008
Identities = 22/58 (37%), Positives = 23/58 (39%)
Frame = -3
Query: 1029 FFSPPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPP 856
FF PP P PP P PP+F G P PP G P PP PPP
Sbjct: 63 FFIPPPV--PNGFIPPPPGPGGIPPPPPMFAGGIPPPPP--MMGGIPPPPPMFGAPPP 116
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = -3
Query: 1026 FSPPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGAPXXPP 877
F PP G PP F PP+ G P PP FGAP PP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMG-GIPPPPP---MFGAPPPPP 118
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -3
Query: 1020 PPXXGXPKXXXX-PPXFPQKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPP 856
PP PK PP P PP G P PP F G P PP PP
Sbjct: 53 PPGQSIPKPSFFIPPPVPN-GFIPPPPGPGGIPPPP-PMFAGGIPPPPPMMGGIPP 106
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 1209 PXXPXFFXXGXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPPPP 1078
P P F G P PPPP G PPPPPP
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFG-------APPPPPPP 120
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.076
Identities = 31/99 (31%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXX 819
PG+ P G PG GG L G P P GPPG VPG
Sbjct: 184 PGQKG-PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPG-T 241
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G P G P G G P
Sbjct: 242 PGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAP 280
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.076
Identities = 31/99 (31%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXX 819
PG+ P G PG GG L G P P GPPG VPG
Sbjct: 184 PGQKG-PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPG-T 241
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G P G P G G P
Sbjct: 242 PGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAP 280
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 35.5 bits (78), Expect = 0.076
Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGG-PFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PG+ P+G PG GG F G P P G PG PG
Sbjct: 343 PGRDG-PKGNSGPPGPPGGGTFNDGAPGPPGLPG--------RPGNPGPPGTDGYPGAPG 393
Query: 823 P--PXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGG 921
P P TGG P G+P G GPK K GG
Sbjct: 394 PAGPIGNTGG--PGLPGYPGNEGLPGPKGDKGDGG 426
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 35.5 bits (78), Expect = 0.076
Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGG-PFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PG+ P+G PG GG F G P P G PG PG
Sbjct: 342 PGRDG-PKGNSGPPGPPGGGTFNDGAPGPPGLPG--------RPGNPGPPGTDGYPGAPG 392
Query: 823 P--PXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGG 921
P P TGG P G+P G GPK K GG
Sbjct: 393 PAGPIGNTGG--PGLPGYPGNEGLPGPKGDKGDGG 425
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.076
Identities = 31/99 (31%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXX 819
PG+ P G PG GG L G P P GPPG VPG
Sbjct: 184 PGQKG-PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPG-T 241
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G P G P G G P
Sbjct: 242 PGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAP 280
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.076
Identities = 31/99 (31%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXX 819
PG+ P G PG GG L G P P GPPG VPG
Sbjct: 184 PGQKG-PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPG-T 241
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G P G P G G P
Sbjct: 242 PGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAP 280
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 35.5 bits (78), Expect = 0.076
Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGG-PFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PG+ P+G PG GG F G P P G PG PG
Sbjct: 342 PGRDG-PKGNSGPPGPPGGGTFNDGAPGPPGLPG--------RPGNPGPPGTDGYPGAPG 392
Query: 823 P--PXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGG 921
P P TGG P G+P G GPK K GG
Sbjct: 393 PAGPIGNTGG--PGLPGYPGNEGLPGPKGDKGDGG 425
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 35.5 bits (78), Expect = 0.076
Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGG-PFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PG+ P+G PG GG F G P P G PG PG
Sbjct: 343 PGRDG-PKGNSGPPGPPGGGTFNDGAPGPPGLPG--------RPGNPGPPGTDGYPGAPG 393
Query: 823 P--PXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGG 921
P P TGG P G+P G GPK K GG
Sbjct: 394 PAGPIGNTGG--PGLPGYPGNEGLPGPKGDKGDGG 426
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 35.5 bits (78), Expect = 0.076
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PGK P+ G P PG G P G P P GPPG
Sbjct: 225 PGKDA-PQEGSPVPGDPGPPGDSGIPGPPGPPG 256
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 35.5 bits (78), Expect = 0.076
Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGG-PFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PG+ P+G PG GG F G P P G PG PG
Sbjct: 379 PGRDG-PKGNSGPPGPPGGGTFNDGAPGPPGLPG--------RPGNPGPPGTDGYPGAPG 429
Query: 823 P--PXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGG 921
P P TGG P G+P G GPK K GG
Sbjct: 430 PAGPIGNTGG--PGLPGYPGNEGLPGPKGDKGDGG 462
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.10
Identities = 25/80 (31%), Positives = 25/80 (31%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PPG P F P GGP G P P GP G G P
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPG----------GFGP 435
Query: 823 PPXXKTGG*NPXGXGFPFXG 882
PP G P GFP G
Sbjct: 436 PPPGGPGAYGPPPTGFPPVG 455
Score = 31.5 bits (68), Expect = 1.2
Identities = 43/166 (25%), Positives = 46/166 (27%), Gaps = 16/166 (9%)
Frame = -3
Query: 1095 PPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXP-KXXXXPPXFPQKXXFXPPLFXXGFPXP 919
PPP P P F +PP G P + PP P + PP G P P
Sbjct: 296 PPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQG--GPPQGSFGAP-P 352
Query: 918 PXXFF-----XFGAP----------XXPPKXEXPPPXVLXPRFXXGGGXXPRNXGLSXXX 784
P F FG P PP PP P G P G
Sbjct: 353 PQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPP 412
Query: 783 XXXXXXXXXXXXPXXGAPGGXXPX*KRXPXXPRGXEXPPGXXPFXG 646
P G PGG P P P PP P G
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPP---PPGGPGAYGPPPTGFPPVG 455
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = -2
Query: 748 PXXGGPXGXXPXLKKXPPX---PPGXGXPPGXXPXXRG 644
P GGP P PP PPG PG P RG
Sbjct: 436 PPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARG 473
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 35.1 bits (77), Expect = 0.10
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 1156 KXXPPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
K PP PP + PPPPPP P K PP
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPP 100
Score = 32.3 bits (70), Expect = 0.71
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
PP PP PPPPPP P K PP
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
PP PP PPPPPP K PP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 34.7 bits (76), Expect = 0.13
Identities = 31/99 (31%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXX 819
PG+ P G PG GG L G P P GPPG VPG
Sbjct: 185 PGQKG-PSGAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGQVVDVPG-T 242
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G P G P G G P
Sbjct: 243 PGPAGPPGPPGPAGAPGQPGQSGSAQPGGPGPQGDAGAP 281
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 34.7 bits (76), Expect = 0.13
Identities = 31/99 (31%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXX 819
PG+ P G PG GG L G P P GPPG VPG
Sbjct: 181 PGQKG-PSGAPGVPGQTGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGQVVDVPG-T 238
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G P G P G G P
Sbjct: 239 PGPAGPPGPPGPAGAPGQPGQSGSGQPGGPGPQGDAGAP 277
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 34.7 bits (76), Expect = 0.13
Identities = 31/99 (31%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXX 819
PG+ P G PG GG L G P P GPPG VPG
Sbjct: 182 PGQKG-PSGAPGQPGRSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGHVVDVPG-T 239
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G P G P G G P
Sbjct: 240 PGPAGPPGPAGPAGAPGQPGQAGHAQPGQPGPQGDAGAP 278
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 34.3 bits (75), Expect = 0.18
Identities = 31/105 (29%), Positives = 31/105 (29%), Gaps = 3/105 (2%)
Frame = +1
Query: 643 PPGKXXXP-RGGFPX-PGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGX 816
PPG P G P PG P L G P GPPG PG
Sbjct: 162 PPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPG- 220
Query: 817 XPPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKPXXKKG 948
P G P G G P G GP K G P G
Sbjct: 221 APGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDG 265
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 34.3 bits (75), Expect = 0.18
Identities = 31/105 (29%), Positives = 31/105 (29%), Gaps = 3/105 (2%)
Frame = +1
Query: 643 PPGKXXXP-RGGFPX-PGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGX 816
PPG P G P PG P L G P GPPG PG
Sbjct: 162 PPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPG- 220
Query: 817 XPPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKPXXKKG 948
P G P G G P G GP K G P G
Sbjct: 221 APGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDG 265
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.23
Identities = 28/103 (27%), Positives = 31/103 (30%), Gaps = 1/103 (0%)
Frame = -3
Query: 1146 PPPPXGXGXFFXXXXKXP-PPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFP 970
PPP G P PPPPP P PP PP P
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Query: 969 QKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPPXVLXP 841
+ P + G P PP FG P PPP + P
Sbjct: 305 GRTPGPPGM--PGMPPPPPP-SRFGPPGMGGMPPPPPPGMRYP 344
Score = 32.3 bits (70), Expect = 0.71
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -3
Query: 1161 PKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXP 982
P PPPP G PPPPPP R P + P P P
Sbjct: 314 PGMPPPPPPSRFGP--PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
Query: 981 PXFPQKXXFXPP 946
P P PP
Sbjct: 372 PAPPSGHGMIPP 383
Score = 29.5 bits (63), Expect = 5.0
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Frame = -3
Query: 1095 PPPPPPXXRXKKKXXPXXXXXXFFSPPXX------GXPKXXXXPPXFPQKXXFXPPLFXX 934
PPP PP + P + PP G P PP P F PP
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP-PPPSRFGPP-GMG 331
Query: 933 GFPXPPXXFFXFGAPXXPPKXEXPPP 856
G P PP + PP PPP
Sbjct: 332 GMPPPPPPGMRYPGGMPPP----PPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.23
Identities = 28/103 (27%), Positives = 31/103 (30%), Gaps = 1/103 (0%)
Frame = -3
Query: 1146 PPPPXGXGXFFXXXXKXP-PPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFP 970
PPP G P PPPPP P PP PP P
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Query: 969 QKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPPXVLXP 841
+ P + G P PP FG P PPP + P
Sbjct: 315 GRTPGPPGM--PGMPPPPPP-SRFGPPGMGGMPPPPPPGMRYP 354
Score = 32.3 bits (70), Expect = 0.71
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -3
Query: 1161 PKXXXPPPPXGXGXFFXXXXKXPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXP 982
P PPPP G PPPPPP R P + P P P
Sbjct: 324 PGMPPPPPPSRFGP--PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
Query: 981 PXFPQKXXFXPP 946
P P PP
Sbjct: 382 PAPPSGHGMIPP 393
Score = 29.5 bits (63), Expect = 5.0
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Frame = -3
Query: 1095 PPPPPPXXRXKKKXXPXXXXXXFFSPPXX------GXPKXXXXPPXFPQKXXFXPPLFXX 934
PPP PP + P + PP G P PP P F PP
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP-PPPSRFGPP-GMG 341
Query: 933 GFPXPPXXFFXFGAPXXPPKXEXPPP 856
G P PP + PP PPP
Sbjct: 342 GMPPPPPPGMRYPGGMPPP----PPP 363
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.23
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 634 FFXPPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
F P G P G PG G P G P P GPPG
Sbjct: 120 FMSPTGCIRCPAGPPGSPGDHGSPGEPGYPGPSGPPG 156
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.5 bits (73), Expect = 0.31
Identities = 29/103 (28%), Positives = 32/103 (31%), Gaps = 1/103 (0%)
Frame = +3
Query: 858 GXGXPXXGGXXGPQXXKXXXGXGETXXXKGGXKXXFFGEXGGGXXXFXGTXXXXGKKXXX 1037
G G G G G G GG +G GGG F G G
Sbjct: 116 GGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGG-YGGGGMGGGG 174
Query: 1038 XXXGGXXFFFXGXXGGGG-GGXXXXXKKXPPXPGGXGGXXFXG 1163
GG + G GGGG GG GG GG + G
Sbjct: 175 YGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGG 217
Score = 30.3 bits (65), Expect = 2.9
Identities = 28/102 (27%), Positives = 31/102 (30%)
Frame = +3
Query: 858 GXGXPXXGGXXGPQXXKXXXGXGETXXXKGGXKXXFFGEXGGGXXXFXGTXXXXGKKXXX 1037
G G GG G G G+ GG G GGG G G
Sbjct: 81 GSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGG-GGYGGYGGGGYGG 139
Query: 1038 XXXGGXXFFFXGXXGGGGGGXXXXXKKXPPXPGGXGGXXFXG 1163
G + G GGGGGG GG GG + G
Sbjct: 140 MGGGPGGYGMGGYGGGGGGGGDFGGY----GGGGMGGGGYGG 177
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 33.1 bits (72), Expect = 0.41
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = +1
Query: 595 PXXGGKXXXXG*XFFXPPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
P GK G P G P G P PG GG G P P GPPG
Sbjct: 203 PGAPGKDGEKGKGEPGPAGPPGPPGPGGP-PGDAGGAGSDGAPGPQGPPG 251
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 33.1 bits (72), Expect = 0.41
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 945 GGXKXXFFGEXGGGXXXFXGTXXXXGKKXXXXXXGGXXFFFXGXXGGGGGG 1097
GG FFG GGG G G GG G GGGGGG
Sbjct: 44 GGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGG 94
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 32.7 bits (71), Expect = 0.54
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 1209 PXXPXFFXXGXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPPPP 1078
P P F P PPPP G PPPPPP
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 31.9 bits (69), Expect = 0.94
Identities = 27/102 (26%), Positives = 30/102 (29%), Gaps = 5/102 (4%)
Frame = -3
Query: 1146 PPPPXGXGXFFXXXXKXPPPPP-PXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFP 970
PPPP + PPPPP R P + +P PP P
Sbjct: 558 PPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPP 617
Query: 969 QKXXFXPPLFXXGFPXPPXXFFXFGAP----XXPPKXEXPPP 856
Q P P PP G P PP PPP
Sbjct: 618 QSFGMAP--ISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 1161 PKXXXPPPPXGXGXFFXXXXKXPPPPPP 1078
P PPPP G PPPPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPP 636
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXP 1070
PP PP G PPPPPP P
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 32.7 bits (71), Expect = 0.54
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 1209 PXXPXFFXXGXXXXXPPKXXXPPPPXGXGXFFXXXXKXPPPPPP 1078
P P F P PPPP G PPPPPP
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 31.9 bits (69), Expect = 0.94
Identities = 27/102 (26%), Positives = 30/102 (29%), Gaps = 5/102 (4%)
Frame = -3
Query: 1146 PPPPXGXGXFFXXXXKXPPPPP-PXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFP 970
PPPP + PPPPP R P + +P PP P
Sbjct: 384 PPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPP 443
Query: 969 QKXXFXPPLFXXGFPXPPXXFFXFGAP----XXPPKXEXPPP 856
Q P P PP G P PP PPP
Sbjct: 444 QSFGMAP--ISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 1161 PKXXXPPPPXGXGXFFXXXXKXPPPPPP 1078
P PPPP G PPPPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPP 462
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXP 1070
PP PP G PPPPPP P
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPP 464
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.71
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPPPP 1078
PP PPPP F PPPPPP
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPP 68
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.3 bits (70), Expect = 0.71
Identities = 31/108 (28%), Positives = 33/108 (30%), Gaps = 6/108 (5%)
Frame = +1
Query: 643 PPGKXXXPRGG--FPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGX 816
P + P GG F PG GGP G P P G PG
Sbjct: 111 PQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGG 170
Query: 817 XPPPXXKTGG*NPXGXGF----PFXGGXXGPKXKKXXGGXGKPXXKKG 948
P G P G G P GG GP + GG G P G
Sbjct: 171 MGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQ--GGPGGPGGPGG 216
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.71
Identities = 31/108 (28%), Positives = 33/108 (30%), Gaps = 6/108 (5%)
Frame = +1
Query: 643 PPGKXXXPRGG--FPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGX 816
P + P GG F PG GGP G P P G PG
Sbjct: 391 PQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGG 450
Query: 817 XPPPXXKTGG*NPXGXGF----PFXGGXXGPKXKKXXGGXGKPXXKKG 948
P G P G G P GG GP + GG G P G
Sbjct: 451 MGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQ--GGPGGPGGPGG 496
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 32.3 bits (70), Expect = 0.71
Identities = 28/98 (28%), Positives = 30/98 (30%), Gaps = 1/98 (1%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PPG P G PG P G P GPPG +PG
Sbjct: 161 PPGDSGEP-GSPGLPGQDAAPGEPGPKGPKGPPG-APGAPEHQESQECPRGEPLIPGEPG 218
Query: 823 PPXXKTGG*NPXGXGFPFXGGXXG-PKXKKXXGGXGKP 933
PP P G P G G P K G G+P
Sbjct: 219 PPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQP 256
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 32.3 bits (70), Expect = 0.71
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +1
Query: 643 PPGKXXX--PRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PPGK P G PG GG L G P P GP G
Sbjct: 193 PPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQG 228
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 1071 GXXGGGGGGXXXXXKKXPPXPGGXGG 1148
G GGGGGG PP PGG G
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPG 114
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +1
Query: 595 PXXGGKXXXXG*XFFXPPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
P GGK G PPG+ R G P PG G P G P GP G
Sbjct: 182 PGPGGKPGPAG-----PPGENG--RNGEPQPGSPGEPGRPGQPGSRGPAG 224
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PPG P G G G P G P P GPPG
Sbjct: 163 PPGPEG-PNGTAGNKGPAGPPGPGGKPGPAGPPG 195
Score = 28.7 bits (61), Expect = 8.7
Identities = 27/98 (27%), Positives = 28/98 (28%), Gaps = 1/98 (1%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PP P G PG G P G P GPPG PG P
Sbjct: 132 PPPCKPCPEG---PPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKP 188
Query: 823 PPXXKTGG*NPXGXGFPFXGGXXG-PKXKKXXGGXGKP 933
P G G P G G P G G+P
Sbjct: 189 GPAGPPGENGRNGEPQPGSPGEPGRPGQPGSRGPAGQP 226
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 1071 GXXGGGGGGXXXXXKKXPPXPGGXGG 1148
G GGGGGG PP PGG G
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPG 114
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/105 (27%), Positives = 29/105 (27%), Gaps = 3/105 (2%)
Frame = +1
Query: 643 PPGKXXXPRG-GFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPG 813
P G P G G P P GGP G P P GP G PG
Sbjct: 157 PKGPPGPPGGHGEPGPAGRGGP--RGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPG 214
Query: 814 XXPPPXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGGXGKPXXKKG 948
P G P G P G GP G K G
Sbjct: 215 EPGQPGEPGGPGEPGADGRPGHPGRAGPPGPPGDNGPNGEPGKDG 259
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG 750
P P+G PG G P G P GPPG G
Sbjct: 151 PAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPG 185
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 1071 GXXGGGGGGXXXXXKKXPPXPGGXGG 1148
G GGGGGG PP PGG G
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPG 114
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 1071 GXXGGGGGGXXXXXKKXPPXPGGXGG 1148
G GGGGGG PP PGG G
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPG 114
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 31.5 bits (68), Expect = 1.2
Identities = 30/99 (30%), Positives = 31/99 (31%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXX 819
PG+ P G PG GG L G P P G PG VPG
Sbjct: 219 PGQKG-PSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAPGQVVDVPG-A 276
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G P G P G G P
Sbjct: 277 PGPAGPPGPPGPSGAPGHPGQAGSSLPGAPGPQGDAGAP 315
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXK--XPPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXX 991
PP PPPP G PPPPPP P PP G P
Sbjct: 536 PPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPP---PPPMLGGPPPP 592
Query: 990 XXPP 979
PP
Sbjct: 593 PPPP 596
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.1 bits (67), Expect = 1.6
Identities = 29/105 (27%), Positives = 30/105 (28%), Gaps = 3/105 (2%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVP--GX 816
PPG P G PG G G P P GPPG P
Sbjct: 155 PPGAPGDP-GEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPG 213
Query: 817 XPPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKPXXKKG 948
P +G P G G P G GP K G P G
Sbjct: 214 APGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADG 258
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 1/94 (1%)
Frame = +1
Query: 643 PPGKXXXP-RGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXX 819
PPG P G P P + G P P GPP G PG
Sbjct: 196 PPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQGPP--GPPGQAGPDGQPGAPGGPGTPGSK 253
Query: 820 PPPXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGG 921
PP P G P G GP K G
Sbjct: 254 GPPGNPGA---PGADGKPGAPGQAGPAGAKGEKG 284
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.6
Identities = 30/103 (29%), Positives = 32/103 (31%), Gaps = 6/103 (5%)
Frame = +1
Query: 643 PPGKXXXPR-GGFPX-PGXXGGPFLXGXPXP---XGPPGXGXXXXXXXXXXXXXXXXXXV 807
PPG P G P PG G G P P GPPG +
Sbjct: 155 PPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLI 214
Query: 808 PGXXPPPXXKTGG*NPXGXGFPFXGGXXG-PKXKKXXGGXGKP 933
PG PP P G P G G P K G G+P
Sbjct: 215 PGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQP 257
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.1 bits (67), Expect = 1.6
Identities = 29/105 (27%), Positives = 30/105 (28%), Gaps = 3/105 (2%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVP--GX 816
PPG P G PG G G P P GPPG P
Sbjct: 155 PPGAPGDP-GEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPG 213
Query: 817 XPPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKPXXKKG 948
P +G P G G P G GP K G P G
Sbjct: 214 APGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADG 258
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.6
Identities = 31/125 (24%), Positives = 36/125 (28%), Gaps = 7/125 (5%)
Frame = +3
Query: 858 GXGXPXXGGXXGPQXXKXXXGXGETXXXKGGXKXXFFGEXGGGXXX-----FXGTXXXXG 1022
G G GG G G G GG + + G GGG + G G
Sbjct: 53 GGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGG 112
Query: 1023 KKXXXXXX--GGXXFFFXGXXGGGGGGXXXXXKKXPPXPGGXGGXXFXGXXXXXXXXKKX 1196
GG G GG GGG + PP G G G +
Sbjct: 113 GNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRG 172
Query: 1197 XGXGG 1211
G GG
Sbjct: 173 GGGGG 177
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.6
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 1/98 (1%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PPG P G G G P G P P GPPG PG
Sbjct: 165 PPGPEG-PNGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQRG 223
Query: 823 PPXXKTGG*NPXGXGFPFXGGXXG-PKXKKXXGGXGKP 933
P +P G G G G P G G+P
Sbjct: 224 PAGEPGKDGSPGGQGEKGASGEPGQPGRDGQPGHPGQP 261
Score = 28.7 bits (61), Expect = 8.7
Identities = 27/98 (27%), Positives = 28/98 (28%), Gaps = 1/98 (1%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXXP 822
PP P G PG G P G P GPPG PG P
Sbjct: 134 PPPCKPCPEG---PPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKP 190
Query: 823 PPXXKTGG*NPXGXGFPFXGGXXG-PKXKKXXGGXGKP 933
P G G P G G P G G+P
Sbjct: 191 GPAGPPGENGNNGEPQPGAPGEPGQPGQPGQRGPAGEP 228
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.6
Identities = 30/103 (29%), Positives = 32/103 (31%), Gaps = 6/103 (5%)
Frame = +1
Query: 643 PPGKXXXPR-GGFPX-PGXXGGPFLXGXPXP---XGPPGXGXXXXXXXXXXXXXXXXXXV 807
PPG P G P PG G G P P GPPG +
Sbjct: 155 PPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLI 214
Query: 808 PGXXPPPXXKTGG*NPXGXGFPFXGGXXG-PKXKKXXGGXGKP 933
PG PP P G P G G P K G G+P
Sbjct: 215 PGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQP 257
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = +1
Query: 643 PPGKXXXPRGGFPX-----PGXXGGPFLXGXPXPXGPPG 744
PPG P GG+ PG G P G P P G PG
Sbjct: 266 PPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPG 304
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 646 PGKXXXP-RGGFPXPGXXGGPFLXGXPXPXGPPG 744
PG+ P + G P GG G P P GPPG
Sbjct: 232 PGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPG 265
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 748 PXXGGPXGXXPXLKKXPPXPPGXGXPPG 665
P GP G + PP PPG PPG
Sbjct: 191 PGPAGPAGEDAAAPESPPGPPGPPGPPG 218
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.2
Identities = 29/105 (27%), Positives = 30/105 (28%), Gaps = 3/105 (2%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVP--GX 816
PPG P G PG G G P P GPPG P
Sbjct: 160 PPGAPGDP-GEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPG 218
Query: 817 XPPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKPXXKKG 948
P +G P G G P G GP K G P G
Sbjct: 219 APGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDG 263
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/84 (26%), Positives = 25/84 (29%)
Frame = -3
Query: 1092 PPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPPX 913
PPPPP + P F PP P P + F P P P
Sbjct: 100 PPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGP------PGPHR 153
Query: 912 XFFXFGAPXXPPKXEXPPPXVLXP 841
+ P P PPP L P
Sbjct: 154 PPEHYPGPPRPQAPAAPPPKSLFP 177
Score = 29.5 bits (63), Expect = 5.0
Identities = 30/115 (26%), Positives = 36/115 (31%), Gaps = 12/115 (10%)
Frame = -3
Query: 1164 PPKXXXPPPPXGXGXFFXXXXKXPPPP-------PPXXRXK---KKXXPXXXXXXFFSPP 1015
PP+ PPPP G + + PPP PP + + P F PP
Sbjct: 95 PPRGYPPPPPQGADTW-----RGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPP 149
Query: 1014 XXGXPKXXXXPPXFPQKXXFXPP--LFXXGFPXPPXXFFXFGAPXXPPKXEXPPP 856
P P PQ PP LF P AP + PPP
Sbjct: 150 GPHRPPEHYPGPPRPQAPAAPPPKSLFPSAQKPKPLFAAASSAPSFFGAPQRPPP 204
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PPG+ P G PG G G P P GPPG
Sbjct: 211 PPGEPGPP-GAHGDPGDLGEEGPPGLPGPKGPPG 243
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 30.3 bits (65), Expect = 2.9
Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 4/88 (4%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXG----GPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVP 810
PPG+ P G PG G GP G P P GPPG P
Sbjct: 238 PPGQDGHP-GDAGAPGAPGQVVAGPGSVGPPGPQGPPGLAGPDGQPGHGGGGQPGPQGPP 296
Query: 811 GXXPPPXXKTGG*NPXGXGFPFXGGXXG 894
G P G P G G G
Sbjct: 297 GDDGHPGEDGGAGGPGQPGQDGGSGGSG 324
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 30.3 bits (65), Expect = 2.9
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = -3
Query: 1092 PPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPX-FPQKXXFXPPLFXXGFPXPP 916
PPPPP K P + S PK PP P P P PP
Sbjct: 434 PPPPPSAPPTIKF-PISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPP 492
Query: 915 XXFFXFGAPXXPPKXEXPPP 856
P P PPP
Sbjct: 493 PPLPPIATPSSVPPPPPPPP 512
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.3 bits (65), Expect = 2.9
Identities = 31/101 (30%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = +1
Query: 643 PPGKXXXPRG-GFPX-PGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGX 816
PPG G G P PG G P G P GP G PG
Sbjct: 125 PPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPG- 183
Query: 817 XPPPXXKTGG*NPXG-XGFPFXGGXXG-PKXKKXXGGXGKP 933
P P G P G G P G G P K G G+P
Sbjct: 184 APGPQGTPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQP 224
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.9
Identities = 31/101 (30%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = +1
Query: 643 PPGKXXXPRG-GFPX-PGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGX 816
PPG G G P PG G P G P GP G PG
Sbjct: 158 PPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPG- 216
Query: 817 XPPPXXKTGG*NPXG-XGFPFXGGXXG-PKXKKXXGGXGKP 933
P P G P G G P G G P K G G+P
Sbjct: 217 APGPQGTPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQP 257
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.9
Identities = 30/101 (29%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Frame = +1
Query: 643 PPGKXXXPRGGFPX--PGXXGGPFLXGXPXPXGPPG-XGXXXXXXXXXXXXXXXXXXVPG 813
P G P G P P GP G P P GPPG G G
Sbjct: 175 PDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAG 234
Query: 814 XXPPPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGGXGKP 933
P P G P G G G GP K G G+P
Sbjct: 235 --PGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAGQP 273
Score = 29.5 bits (63), Expect = 5.0
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPX----PXGPPGXGXXXXXXXXXXXXXXXXXXVP 810
PP P G PG G P G P P GP G G P
Sbjct: 159 PPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQP 218
Query: 811 GXXPPPXXKTGG--*NPXGXGFPFXGGXXGPKXKKXXGGXGKPXXK 942
G + G P G P G GP + G G P K
Sbjct: 219 GGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPK 264
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 1071 GXXGGGGGGXXXXXKKXPPXPGGXGG 1148
G GGGGG PP PGG G
Sbjct: 104 GEAAGGGGGCTGCCNPGPPGPGGRPG 129
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 667 RGGFPXPGXXGGPFLXGXPXPXGPPG 744
+GG PG G P G P P GPPG
Sbjct: 246 QGGPGSPGLAGAPGDSGAPGPQGPPG 271
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PPG PRG PG G P L G P G PG
Sbjct: 168 PPG----PRGPPGVPGITGAPGLDGIPGRHGTPG 197
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPP 741
P G+ P+G PG G P G P P GPP
Sbjct: 66 PSGQPPGPQGPSDLPGPSGAP--PGPPHPSGPP 96
Score = 28.7 bits (61), Expect = 8.7
Identities = 28/86 (32%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPF-LXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXX 819
PPG P G P G GPF G P GPPG P
Sbjct: 166 PPG-LFDPSGA-PPSGGPPGPFGPSGAPPSGGPPG---PFNPSEAPPSGGPTGPFDPSGA 220
Query: 820 PPPXXKTGG*NPXGXGFPFXGGXXGP 897
PP G NP G P GG GP
Sbjct: 221 PPSGGPPGPFNPSGA--PPSGGPPGP 244
Score = 28.7 bits (61), Expect = 8.7
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPF-LXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGXX 819
PPG G P G GPF G P GPPG P
Sbjct: 361 PPGPFDP--SGAPPSGGPPGPFDPSGAPPSGGPPG---PFDPSGAPPSGGPPGPFNPSGA 415
Query: 820 PPPXXKTGG*NPXGXGFPFXGGXXGP 897
PP G NP G P GG GP
Sbjct: 416 PPSGGPPGPFNPSGA--PPSGGPPGP 439
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 2.9
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = -3
Query: 1092 PPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPX-FPQKXXFXPPLFXXGFPXPP 916
PPPPP K P + S PK PP P P P PP
Sbjct: 441 PPPPPSAPPTIKF-PISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPP 499
Query: 915 XXFFXFGAPXXPPKXEXPPP 856
P P PPP
Sbjct: 500 PPLPPIATPSSVPPPPPPPP 519
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 1047 GGXXFFFXGXXGGGGGGXXXXXKKXPPXPGGXG 1145
GG G GGGGGG + PP P G G
Sbjct: 5 GGPGGPMYGGAGGGGGGPPRGPPQQPPQPQGGG 37
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Frame = -3
Query: 984 PPXFPQKXXFXPPLFXXGFP--XPPXXFFXFGAPXXPPKXEXPP-PXVLXPRFXXGG 823
PP +P + P+ G P PP F GA P PP P + P GG
Sbjct: 393 PPSYPSPGQYPGPMHYPGMPPMMPPGAPFSAGASYPPMGGPFPPNPYGMHPGMTPGG 449
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PPG P G PG G P G P P GPPG
Sbjct: 233 PPG----PMGARGEPGHRGLPGDNGMPGPMGPPG 262
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +1
Query: 643 PPGKXXXP--RGGFPXPGXXGGPFLXGXPXPXGPPG 744
PPG P RG PG G P G P P GP G
Sbjct: 153 PPGPDGEPGVRGPNGPPGPNGHPGQPGRPGPAGPAG 188
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.9 bits (64), Expect = 3.8
Identities = 31/116 (26%), Positives = 35/116 (30%), Gaps = 3/116 (2%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG-XGXXXXXXXXXXXXXXXXXXVPGXX 819
PPG+ P G G P G P P GPPG G P
Sbjct: 157 PPGQPGAPG----EQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPGQVRTVPAPPGN 212
Query: 820 PPPXXKTGG*NPXG-XGFPFXGGXXGPKXKK-XXGGXGKPXXKKGGXKXXFLGKXG 981
P + G P G G P G GP + G G P + GK G
Sbjct: 213 PGQPGEPGAQGPPGEDGRPGNSGPQGPPGPQGEPGQDGAPGNPGAPGEAGEPGKDG 268
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 950 PPFXXXGFPXPPXXFXXLGPXXPPXXGXPXPXG 852
PP+ G P PP P PP G P P G
Sbjct: 809 PPYPYPGGPVPPGPPQNRMPPPPPAQGAPSPSG 841
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -2
Query: 748 PXXGGPXGXXPXLKKXPPXPPGXGXP-PGXXPXXRGXQ 638
P GGP P + PP PP G P P G Q
Sbjct: 812 PYPGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQ 849
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = -2
Query: 748 PXXGGPXGXXPXLKKXPPXPPG--XGXPPGXXPXXRGXQKXXXXXXXFXPPK 599
P G P G P + + P PG PPG P Q+ PPK
Sbjct: 133 PPPGAPYGYPPQMMRPPMMAPGDMVRMPPGPTPTEWAAQQQAQAASRSVPPK 184
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 29.9 bits (64), Expect = 3.8
Identities = 27/94 (28%), Positives = 30/94 (31%), Gaps = 1/94 (1%)
Frame = +3
Query: 870 PXXGGXXGPQXXKXXXGXGETXXXKGGXKXXFFGEXGGGXXXFXGTXXXXGKKXXXXXXG 1049
P GG G + G G +GG + G GGG G G G
Sbjct: 34 PFFGGRSGG-WGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGG 92
Query: 1050 GXXFFFXGXXG-GGGGGXXXXXKKXPPXPGGXGG 1148
G G G GGGGG GG GG
Sbjct: 93 GRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.9 bits (64), Expect = 3.8
Identities = 30/109 (27%), Positives = 31/109 (28%), Gaps = 7/109 (6%)
Frame = +1
Query: 643 PPGKXXXP--RGGFPXPGXXGGPFLXGXPXPXGPPGXGXXXXXXXXXXXXXXXXXXVPGX 816
PPG P +G G G P L G P P GP G P
Sbjct: 166 PPGPKGLPGPQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPG 225
Query: 817 XPPPXXKTGG*NPXG----XGFPFXGGXXG-PKXKKXXGGXGKPXXKKG 948
P P G P G G P G G P G G P G
Sbjct: 226 PPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHGG 274
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 718 PXLKKXPPXPPGXGXPPG 665
P +K PP PPG PPG
Sbjct: 151 PPCQKCPPGPPGPAGPPG 168
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 3.8
Identities = 24/83 (28%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Frame = -3
Query: 1095 PPPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXF---PQKXXFXPPLFXXGFP 925
PPPPPP P SPP P+ PP P++ PP P
Sbjct: 122 PPPPPP---------PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
Query: 924 XPPXXFFXFGAPXXPPKXEXPPP 856
P P PP PPP
Sbjct: 173 RTPPSPEPRNPPRTPPSPIPPPP 195
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical protein
T26C11.2 protein.
Length = 343
Score = 29.9 bits (64), Expect = 3.8
Identities = 21/79 (26%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = -3
Query: 1092 PPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFPQKXXFXPPL-FXXGFPXPP 916
P P P + K K P F P P P FP+ F P+ F P
Sbjct: 38 PKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPMPFPKPMPKSK 97
Query: 915 XXFFXFGAPXXPPKXEXPP 859
F P PK + P
Sbjct: 98 PKSEPFPNPMPFPKPKPMP 116
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/88 (26%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = -3
Query: 1092 PPPPPXXRXKKKXXPXXXXXXFFSPPXXGXPKXXXXPPXFPQKXXFXPPL---FXXGFPX 922
P P P K K P F P PK P FP+ F P+ P
Sbjct: 44 PKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPMPFPKPMPKSKPKSEPF 103
Query: 921 PPXXFFXFGAPXXPPKXEXPPPXVLXPR 838
P F P K + P +L P+
Sbjct: 104 PNPMPFPKPKPMPKHKPKPFPKPMLFPK 131
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.9 bits (64), Expect = 3.8
Identities = 28/102 (27%), Positives = 33/102 (32%), Gaps = 1/102 (0%)
Frame = +1
Query: 649 GKXXXPRGGFPXPGXXGGPFLXGXPXP-XGPPGXGXXXXXXXXXXXXXXXXXXVPGXXPP 825
G+ GG G GGP G P GP G G G
Sbjct: 214 GQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGG 273
Query: 826 PXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGGXGKPXXKKGG 951
P + GG G GG GP+ ++ GG G P GG
Sbjct: 274 PQQQQGGGGWGQQGGGGQGGWGGPQ-QQQQGGWGGPQQGGGG 314
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.9 bits (64), Expect = 3.8
Identities = 28/102 (27%), Positives = 33/102 (32%), Gaps = 1/102 (0%)
Frame = +1
Query: 649 GKXXXPRGGFPXPGXXGGPFLXGXPXP-XGPPGXGXXXXXXXXXXXXXXXXXXVPGXXPP 825
G+ GG G GGP G P GP G G G
Sbjct: 176 GQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGG 235
Query: 826 PXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGGXGKPXXKKGG 951
P + GG G GG GP+ ++ GG G P GG
Sbjct: 236 PQQQQGGGGWGQQGGGGQGGWGGPQ-QQQQGGWGGPQQGGGG 276
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.9 bits (64), Expect = 3.8
Identities = 28/102 (27%), Positives = 33/102 (32%), Gaps = 1/102 (0%)
Frame = +1
Query: 649 GKXXXPRGGFPXPGXXGGPFLXGXPXP-XGPPGXGXXXXXXXXXXXXXXXXXXVPGXXPP 825
G+ GG G GGP G P GP G G G
Sbjct: 214 GQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGG 273
Query: 826 PXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGGXGKPXXKKGG 951
P + GG G GG GP+ ++ GG G P GG
Sbjct: 274 PQQQQGGGGWGQQGGGGQGGWGGPQ-QQQQGGWGGPQQGGGG 314
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 643 PPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PPG P GG PG GG G P P GPPG
Sbjct: 212 PPG----PAGGPGQPGHSGGA---GSPGPQGPPG 238
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 664 PRGGFPXPGXXGGPFLXGXPXPXGPPG 744
P G PG GGP G P P GP G
Sbjct: 230 PPGPAGSPGAPGGPGQAGAPGPKGPSG 256
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 664 PRGGFPXPGXXGGPFLXGXPXPXGPPG 744
P G PG GGP G P P GP G
Sbjct: 230 PPGPAGSPGAPGGPGQAGAPGPKGPSG 256
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 664 PRGGFPXPGXXGGPFLXGXPXPXGPPG 744
P G PG GGP G P P GP G
Sbjct: 230 PPGPAGSPGAPGGPGQAGAPGPKGPSG 256
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical protein
ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPP 1079
PP PP GG + + PPPPPP
Sbjct: 41 PPPPPPCGGGY----EAPPPPPP 59
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.5 bits (63), Expect = 5.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PG+ PRGG PG G P G P G PG
Sbjct: 246 PGQPG-PRGGPGEPGQDGAPGQPGLPGSDGTPG 277
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
PG+ P G PG GG + G P P GP G
Sbjct: 173 PGQAGAP-GNDGRPGQSGGAAIPGPPGPPGPSG 204
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.5 bits (63), Expect = 5.0
Identities = 29/99 (29%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Frame = +1
Query: 646 PGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG-XGXXXXXXXXXXXXXXXXXXVPGXXP 822
P P G PG G L G P P G PG G PG
Sbjct: 84 PQASNCPAGPPGPPGASGDRGLDGQPGPAGKPGQPGVAGPAHHQQQECIKCPQGAPGPAG 143
Query: 823 PPXXKTGG*NPXG-XGFPFXGGXXGPKXKKXXGG-XGKP 933
P G P G G P GG GP G G P
Sbjct: 144 AP-GNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSP 181
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 1161 PKXXXPPPPXGXGXFFXXXXKXPPPPPP 1078
P PPPP F PPPPPP
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPP 77
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 29.5 bits (63), Expect = 5.0
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +1
Query: 643 PPGKXXXP--RGGFPXPGXXGGPFLXGXPXPXGPPG 744
PPG P +G PG G P G P P GP G
Sbjct: 481 PPGLPGPPGEKGDLGPPGLPGQPGSLGLPGPPGPMG 516
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.6
Identities = 31/119 (26%), Positives = 32/119 (26%), Gaps = 1/119 (0%)
Frame = +3
Query: 858 GXGXPXXGGXXGPQXXKXXXGXGETXXXKGGXKXXFFG-EXGGGXXXFXGTXXXXGKKXX 1034
G G GG G G G GG G GGG G+ G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSS 152
Query: 1035 XXXXGGXXFFFXGXXGGGGGGXXXXXKKXPPXPGGXGGXXFXGXXXXXXXXKKXXGXGG 1211
GG G GGG GG P G GG G G GG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.6
Identities = 31/119 (26%), Positives = 32/119 (26%), Gaps = 1/119 (0%)
Frame = +3
Query: 858 GXGXPXXGGXXGPQXXKXXXGXGETXXXKGGXKXXFFG-EXGGGXXXFXGTXXXXGKKXX 1034
G G GG G G G GG G GGG G+ G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSS 152
Query: 1035 XXXXGGXXFFFXGXXGGGGGGXXXXXKKXPPXPGGXGGXXFXGXXXXXXXXKKXXGXGG 1211
GG G GGG GG P G GG G G GG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
PP PG GG PP PP P K + PP
Sbjct: 627 PPRGPGGGG---GGGPTGPPAPPKPPAKPRGRPP 657
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
PP PG GG PP PP P K + PP
Sbjct: 627 PPRGPGGGG---GGGPTGPPAPPKPPAKPRGRPP 657
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.1 bits (62), Expect = 6.6
Identities = 28/103 (27%), Positives = 33/103 (32%), Gaps = 2/103 (1%)
Frame = +1
Query: 649 GKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXXP 822
G+ GG G GGP G P G PG G G
Sbjct: 176 GQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWG 235
Query: 823 PPXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGGXGKPXXKKGG 951
P + GG G GG GP+ ++ GG G P GG
Sbjct: 236 GPQQQQGGGGWGQQGGGGQGGWGGPQ-QQQQGGWGGPQQGGGG 277
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.1 bits (62), Expect = 6.6
Identities = 28/103 (27%), Positives = 33/103 (32%), Gaps = 2/103 (1%)
Frame = +1
Query: 649 GKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPGXG--XXXXXXXXXXXXXXXXXXVPGXXP 822
G+ GG G GGP G P G PG G G
Sbjct: 214 GQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWG 273
Query: 823 PPXXKTGG*NPXGXGFPFXGGXXGPKXKKXXGGXGKPXXKKGG 951
P + GG G GG GP+ ++ GG G P GG
Sbjct: 274 GPQQQQGGGGWGQQGGGGQGGWGGPQ-QQQQGGWGGPQQGGGG 315
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = -3
Query: 1026 FSPPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPPXVL 847
+ PP PP F F PP FP PP F G P PP PP +
Sbjct: 276 YGPPHPMHHPYAMMPPPF----GFFPPPPRGHFPPPPPHFMGRGMP--PPFMPPPPHFGM 329
Query: 846 XP 841
P
Sbjct: 330 GP 331
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = -3
Query: 1026 FSPPXXGXPKXXXXPPXFPQKXXFXPPLFXXGFPXPPXXFFXFGAPXXPPKXEXPPPXVL 847
+ PP PP F F PP FP PP F G P PP PP +
Sbjct: 276 YGPPHPMHHPYAMMPPPF----GFFPPPPRGHFPPPPPHFMGRGMP--PPFMPPPPHFGM 329
Query: 846 XP 841
P
Sbjct: 330 GP 331
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 667 RGGFPXPGXXGGPFLXGXPXPXGPPG 744
RG PG G P G P P GPPG
Sbjct: 978 RGESGQPGQPGLPGRDGQPGPVGPPG 1003
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 667 RGGFPXPGXXGGPFLXGXPXPXGPPG 744
RG PG G P G P P GPPG
Sbjct: 1235 RGESGQPGQPGLPGRDGQPGPVGPPG 1260
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 667 RGGFPXPGXXGGPFLXGXPXPXGPPG 744
RG PG G P G P P GPPG
Sbjct: 1234 RGESGQPGQPGLPGRDGQPGPVGPPG 1259
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2
Query: 1162 PXKXXPPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
P PP PPG G PP PP P ++ PP
Sbjct: 238 PSPSDPPGPPGPPG----PPTRRPPGPPGPPTRRPPGPP 272
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
P PP GG PPPPP P PP
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 249
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +1
Query: 604 GGKXXXXG*XFFXPPGKXXXPRGGFPXPGXXGGPFLXGXPXPXGPPG 744
GG G PG P GG PG GGP G P G PG
Sbjct: 101 GGPGNPGGPGGLGTPGGPGTP-GGPGNPGGLGGPGNPGGPGTPGGPG 146
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.7 bits (61), Expect = 8.7
Identities = 22/91 (24%), Positives = 27/91 (29%), Gaps = 1/91 (1%)
Frame = +1
Query: 715 GXPXPXGPPGX-GXXXXXXXXXXXXXXXXXXVPGXXPPPXXKTGG*NPXGXGFPFXGGXX 891
G P P GPPG G PG P P G P G
Sbjct: 137 GAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRG 196
Query: 892 GPKXKKXXGGXGKPXXKKGGXKXXFLGKXGG 984
G + + G G+P + G+ GG
Sbjct: 197 GQRSRGTPGASGRPGPQGPAGAPGQPGRSGG 227
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 643 PPGKXXX--PRG--GFPXP-GXXGGPFLXGXPXPXGPPG 744
PPG P G G P P G G P G P P GPPG
Sbjct: 185 PPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPG 223
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
P PP GG PPPPP P PP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 235
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPPXXPXKKKXXPP 1046
P PP GG PPPPP P PP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 235
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 23.8 bits (49), Expect(2) = 9.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 1147 PPXPPGXGGXFFXXXKXPPPPPP 1079
PP PP G PPPPPP
Sbjct: 538 PPPPPPVG----MANGGPPPPPP 556
Score = 23.0 bits (47), Expect(2) = 9.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 1096 PPPPPPXXP 1070
PPPPPP P
Sbjct: 576 PPPPPPPPP 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,318,339
Number of Sequences: 27780
Number of extensions: 369801
Number of successful extensions: 5713
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3497
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3339026560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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