Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P24
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.60 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   7.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   7.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -2

Query: 674 PKVFLYFSITFKHLLSACNSLSYFLAKHFLWIDLAFLSIFSLAISPICFVSLIIYC 507
           P  FL F  T    L   +++ Y    +  ++ LA L+I  +  + +C +SLII C
Sbjct: 221 PIAFLIFFATLD-FLDNVDTIMYEKT-NVTFVHLAVLNILRVGKNFVCLLSLIILC 274


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -2

Query: 602 LAKHFLWIDLAFLSIFSLAISPICFVSLIIYCFI 501
           LA  F W  L FL+I  L       + LI+YC I
Sbjct: 228 LANTF-WSALYFLTIIFLFFIIPLIILLILYCII 260


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 351 CIGVFNTRCYAIKTCLCHISHVTLVLVIER 262
           CI VFN R Y  K     +   T  ++ ER
Sbjct: 230 CIYVFNPRYYLEKKVTRRLHRFTKSVIAER 259


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 351 CIGVFNTRCYAIKTCLCHISHVTLVLVIER 262
           CI VFN R Y  K     +   T  ++ ER
Sbjct: 230 CIYVFNPRYYLEKKVTRRLHRFTKSVIAER 259


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +2

Query: 476 YYFLRIYQL*NSI*LMKQNRLVKLPKKKLTKRLNQSKENA*QGNKTNYYRLTRDV*TLSK 655
           YY   +  L N +    ++R   L  +KL     QSK      N  NYYR+  D   +  
Sbjct: 180 YYEFLLISLINILIRSFKSRYKDL-NQKLETACEQSKSVEELMNIANYYRILGDTVEIFN 238

Query: 656 SI 661
           S+
Sbjct: 239 SL 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,531
Number of Sequences: 336
Number of extensions: 4062
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)