Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_P23
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 104 9e-23
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 96 3e-20
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 88 7e-18
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 83 3e-16
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 74 1e-13
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 72 6e-13
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 72 6e-13
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 72 6e-13
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 68 1e-11
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 66 2e-11
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 58 8e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 58 8e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 58 8e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 57 2e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 57 2e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 56 4e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 53 2e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 53 2e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 53 2e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 51 1e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 51 1e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 49 5e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 46 3e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 46 3e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 46 5e-05
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 45 8e-05
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 42 4e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 41 0.001
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 39 0.004
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 39 0.004
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 39 0.004
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 39 0.004
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.005
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 38 0.009
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 37 0.021
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 37 0.021
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 36 0.028
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 31 1.4
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 30 1.8
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 3.2
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 3.2
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 29 3.2
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 29 4.2
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.2
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.2
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 5.6
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 5.6
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 5.6
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 104 bits (249), Expect = 9e-23
Identities = 47/116 (40%), Positives = 77/116 (66%)
Frame = +2
Query: 305 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 484
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 485 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHI 652
P + + + +++PT IQ+ WPIAMSG+++ +A+TGSGKTLA++LPA+VHI
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHI 191
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/112 (38%), Positives = 67/112 (59%)
Frame = +2
Query: 317 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 496
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 497 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHI 652
+ + ++ Y++PTPIQA P A+SG+++ G+A+TGSGKT AY+ PAIVHI
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHI 327
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 88.2 bits (209), Expect = 7e-18
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +2
Query: 410 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLX 589
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + +++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 590 GVAQTGSGKTLAYILPAIVHI 652
GVA+TGSGKT A++LP +V I
Sbjct: 343 GVAETGSGKTAAFLLPLLVWI 363
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Frame = +2
Query: 305 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 481
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 482 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHI 652
+ +K Y +PT IQAQ P MSG+++ G+A+TGSGKTLA++LP HI
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHI 366
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 661 PPIRRGDGPIALVXAPT 711
P + GDGPIA++ APT
Sbjct: 370 PELEEGDGPIAVILAPT 386
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/73 (45%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = +2
Query: 437 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSG 613
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 614 KTLAYILPAIVHI 652
KTLA++LPA++HI
Sbjct: 134 KTLAFLLPALLHI 146
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = +2
Query: 404 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 583
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 584 LXGVAQTGSGKTLAYILPAIVHI 652
L AQTGSGKT A++LP I HI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = +2
Query: 404 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 583
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 584 LXGVAQTGSGKTLAYILPAIVHI 652
L AQTGSGKT A++LP I HI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = +2
Query: 404 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 583
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 584 LXGVAQTGSGKTLAYILPAIVHI 652
L AQTGSGKT A++LP I HI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHI 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 67.7 bits (158), Expect = 1e-11
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = +2
Query: 428 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTG 607
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 608 SGKTLAYILPAI 643
SGKT A+++P +
Sbjct: 214 SGKTAAFLVPLV 225
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +2
Query: 365 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 541
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 542 IQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIV 646
IQ QG P+A+SG+++ G+A TGSGKT+ ++LP ++
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVM 250
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.0 bits (134), Expect = 8e-09
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2
Query: 458 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 637
P + F EAN + +Q+ V GY + TPIQ P+ G ++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 638 AIVHI 652
+ +
Sbjct: 399 IMTRL 403
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.0 bits (134), Expect = 8e-09
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2
Query: 458 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 637
P + F EAN + +Q+ V GY + TPIQ P+ G ++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 638 AIVHI 652
+ +
Sbjct: 399 IMTRL 403
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 58.0 bits (134), Expect = 8e-09
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2
Query: 458 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 637
P + F EAN + +Q+ V GY + TPIQ P+ G ++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 638 AIVHI 652
+ +
Sbjct: 399 IMTRL 403
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +2
Query: 458 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 637
P + F +++ P +++ V+ GY TPIQ P+ GK++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +2
Query: 458 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 637
P + F +++ P +++ V+ GY TPIQ P+ GK++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPIL 207
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 649
F EAN + +++ V GY + TPIQ P+ G ++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 650 I 652
+
Sbjct: 614 L 614
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 649
F EAN + +++ V GY + TPIQ P+ G ++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 650 I 652
+
Sbjct: 614 L 614
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 649
F EAN + +++ V GY + TPIQ P+ G ++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 650 I 652
+
Sbjct: 614 L 614
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/64 (31%), Positives = 38/64 (59%)
Frame = +2
Query: 452 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYI 631
H +++ V + ++ G+ +PTPIQ + P M GK++ +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 632 LPAI 643
+P +
Sbjct: 80 IPML 83
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/64 (31%), Positives = 38/64 (59%)
Frame = +2
Query: 452 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYI 631
H +++ V + ++ G+ +PTPIQ + P M GK++ +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 632 LPAI 643
+P +
Sbjct: 80 IPML 83
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +2
Query: 377 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 556
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 557 WPIAMSGKNLXGVAQTGSGKTLAYILPAIVHI 652
P +N+ A TGSGKTLA+ LP I I
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEI 188
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 488 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLXGVAQTGSGKTLAYILPAIVHI 652
P+ V + ++ MG+ EPT IQ+ P A+ + ++ G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL 218
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
F + ++ Q ++TM K TP+QA P + G ++ G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
F + ++ Q ++TM K TP+QA P + G ++ G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +2
Query: 407 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 586
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 587 XGVAQTGSGKTLAYILPAIVHI 652
A TGSGKTLA+++P ++ +
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +2
Query: 407 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 586
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 587 XGVAQTGSGKTLAYILPAIVHI 652
A TGSGKTLA+++P ++ +
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKL 798
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 503 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
+G+K Y +PT IQ +++G ++ G A+TGSGKTLA ++P +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
F E + + +G+ +P+ IQ P A+ GK++ G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 503 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
+ V+ +G+ T IQA+ + GK++ A+TGSGKTLA++LPAI
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI 127
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +2
Query: 506 GVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHI 652
G+ G+++P+PIQ +A++G+++ A+ G+GKT AY +P I I
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI 105
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
F + + + + + +G+++ +Q +A+ KN+ G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 461 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVAQTGSGKTLAYIL 634
I F E V + + TM ++ PT IQ P+ + NL AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 635 PAIVHI 652
+ I
Sbjct: 268 TMLCRI 273
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 461 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVAQTGSGKTLAYIL 634
I F E V + + TM ++ PT IQ P+ + NL AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 635 PAIVHI 652
+ I
Sbjct: 293 TMLCRI 298
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 461 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVAQTGSGKTLAYIL 634
I F E V + + TM ++ PT IQ P+ + NL AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 635 PAIVHI 652
+ I
Sbjct: 677 TMLCRI 682
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 524 YKEPTPIQAQGWPIAMSGK-NLXGVAQTGSGKTLAYILPAIVHI 652
+ EPT IQ+ P A+ + ++ G A+TGSGKTLA+ +P + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL 51
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 649
FE + +K + P+P+QA+ P+ + G+++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 650 I 652
+
Sbjct: 84 L 84
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 649
FE + +K + P+P+QA+ P+ + G+++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 650 I 652
+
Sbjct: 84 L 84
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 470 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 637
FEE + + ++ + PT +Q++ P + G + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = +2
Query: 455 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYIL 634
N I F++ + + +G+ G+++P+ IQ + P + +++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 635 PAI 643
+
Sbjct: 83 SVL 85
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/64 (23%), Positives = 36/64 (56%)
Frame = +2
Query: 461 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPA 640
++ F++ + + +G+ G+++P+ IQ + +GK++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 641 IVHI 652
+ I
Sbjct: 88 LQRI 91
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/64 (23%), Positives = 36/64 (56%)
Frame = +2
Query: 461 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPA 640
++ F++ + + +G+ G+++P+ IQ + +GK++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 641 IVHI 652
+ I
Sbjct: 88 LQRI 91
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 36.3 bits (80), Expect = 0.028
Identities = 14/61 (22%), Positives = 34/61 (55%)
Frame = +2
Query: 461 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPA 640
I F++ + + +G+ G+++P+ IQ + P + +++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 641 I 643
+
Sbjct: 85 L 85
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2
Query: 566 AMSGKNLXGVAQTGSGKTLAYILPAIVHI 652
A+ GKN VA TGSGKT I A+ HI
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHI 410
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2
Query: 461 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPA 640
++ F E P+ ++ V YK T +Q ++ ++ + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 641 IVHIXXXRL 667
+ I +L
Sbjct: 68 MRMIQNAKL 76
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 503 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYIL 634
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLI 52
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 171 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 287
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 542 IQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
+Q + G+ L A TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 542 IQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 643
+Q + G+ L A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 602 TGSGKTLAYILPAIVH 649
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 85 PASEXIHSLNKHLQLNPKNNHVW 153
PAS +H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 583 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 404
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 403 D 401
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 583 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 404
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 403 D 401
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 226 RRIIAEFVASSKFGTTVSTAIIPV 155
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 226 RRIIAEFVASSKFGTTVSTAIIPV 155
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 539 PIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIV 646
P+Q MS ++ + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 539 PIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIV 646
P+Q MS ++ + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 560 PIAMSGKNLXGVAQTGSGKTLAYILPAIVHI 652
P + +++ A TGSGKT+ Y+LP + +
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAV 181
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 365 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 523
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 365 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 523
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,238,420
Number of Sequences: 27780
Number of extensions: 325733
Number of successful extensions: 942
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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