Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P20
         (862 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           103   5e-24
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    61   5e-11
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    27   0.97 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.2  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.2  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   5.2  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   6.8  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   6.8  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  103 bits (248), Expect = 5e-24
 Identities = 46/103 (44%), Positives = 70/103 (67%)
 Frame = +3

Query: 111 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 290
           K+++LG+S VGK+SL+ +FV  +F    ++TIGA FLT+ + +DD  V  +IWDTAGQER
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 291 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASP 419
           + SL   +YRGA   ++V+D+   ++F   ++W  E   QASP
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASP 128



 Score = 41.5 bits (93), Expect = 3e-05
 Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 433 NFPFVILGNKVDLDN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALA 609
           N    + GNK DL N R V  +  +Q+    N + + ETSAK AVNV   F  IA+    
Sbjct: 129 NIVIALAGNKADLANSRVVDYEEAKQYADD-NRLLFMETSAKTAVNVNDIFLAIAKKLPK 187

Query: 610 QETEAELYNEFPDQIKLN 663
            E      N  P Q + N
Sbjct: 188 NEGAGPQQNIRPTQNETN 205


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 60.9 bits (141), Expect = 5e-11
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = +3

Query: 108 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 287
           +K +++GD  VGKT ++  +    F  +Y  T   D  +  ++VD   V++ +WDTAGQE
Sbjct: 7   IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPT-SFDNYSAPMVVDGVQVSLGLWDTAGQE 65

Query: 288 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDE 398
            +  L    Y   D  ++ + V +P++F+++ S W  E
Sbjct: 66  DYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPE 103


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 26.6 bits (56), Expect = 0.97
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 454 GNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 555
           G  VDL   ++ VK  +  C  +N++PY E   K
Sbjct: 109 GEYVDLARPSMIVKCTRNVCTGRNEVPYREQCVK 142


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 120 ILGDSGVGKTSLMN 161
           ++G SG GKT+L+N
Sbjct: 131 VMGSSGAGKTTLLN 144


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 120 ILGDSGVGKTSLMN 161
           ++G SG GKT+L+N
Sbjct: 131 VMGSSGAGKTTLLN 144


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 120 ILGDSGVGKTSLMN 161
           ++G SG GKT+L+N
Sbjct: 109 VMGSSGAGKTTLLN 122


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 81  KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 188
           K+ +  K    V + G+ G GKT+ +N F  +KF++
Sbjct: 8   KLGASGKKPFTVFVEGNIGSGKTTFLNHF--QKFND 41


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 81  KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 188
           K+ +  K    V + G+ G GKT+ +N F  +KF++
Sbjct: 8   KLGASGKKPFTVFVEGNIGSGKTTFLNHF--QKFND 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,203
Number of Sequences: 2352
Number of extensions: 17155
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)