Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P19
         (920 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    28   0.12 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    28   0.12 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.36 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   4.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.9  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = -3

Query: 597 RTHYEWNVIILNVV---TVFFQIEGAGLFSE 514
           RT+ EW V  L VV   TVFF + GA + S+
Sbjct: 50  RTYIEWGVKFLKVVTIITVFFVVLGAAVVSK 80



 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 107 YRMEQSETPTRTTHCPK 57
           YR+E S      THCP+
Sbjct: 825 YRVEYSAASDAFTHCPE 841


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = -3

Query: 597 RTHYEWNVIILNVV---TVFFQIEGAGLFSE 514
           RT+ EW V  L VV   TVFF + GA + S+
Sbjct: 50  RTYIEWGVKFLKVVTIITVFFVVLGAAVVSK 80



 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 107 YRMEQSETPTRTTHCPK 57
           YR+E S      THCP+
Sbjct: 825 YRVEYSAASDAFTHCPE 841


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.36
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 116 FLTNYLMFFL*IF*NAEYKFENILS 190
           F+T+YL+F   +  N EYK+  ILS
Sbjct: 142 FVTSYLLFDYFVQRNQEYKYYQILS 166


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 377 LTTSFGCVWIKRALHSGSPSMTCPT 303
           LTT   C  + R   SG   +TCP+
Sbjct: 45  LTTEGDCRDVVRCTKSGLKQITCPS 69


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -3

Query: 627 VVKMSSIWSDRTHYEWNVIILNVVTVFF 544
           V  M   W D   ++W V I  V  V F
Sbjct: 188 VQSMPQCWIDLQTWQWKVYITLVALVLF 215


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 107 YRMEQSETPTRTTHCPK 57
           YR+E S      THCP+
Sbjct: 592 YRVEYSAASDAFTHCPE 608


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,272
Number of Sequences: 336
Number of extensions: 4114
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)