Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P18
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0133 - 1057679-1057880,1058112-1058377                           30   2.8  
02_05_0874 - 32377906-32378131,32378269-32378384,32378516-323789...    29   4.9  
07_03_1415 + 26410999-26411148,26411228-26411290,26412623-264126...    29   6.5  
03_06_0040 + 31240164-31241102,31241280-31241897                       28   8.6  

>03_01_0133 - 1057679-1057880,1058112-1058377
          Length = 155

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 562 CTQ--RLSWPCRSKQPKMRGLEPNQRLPSTLR 473
           CT+  RL WPCR  QP  +GL P  R    L+
Sbjct: 64  CTRGARLGWPCR--QPNTKGLHPWMRASELLK 93


>02_05_0874 -
           32377906-32378131,32378269-32378384,32378516-32378921,
           32379023-32379139,32379229-32379291,32380183-32380373
          Length = 372

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = -3

Query: 762 ILINTRFFLYTTTPKCLLASAVSNLLPAVVFIIPLGCKSIDGVHLKVQHSLELSLLPLFT 583
           +L    +++         ASA+ N+LPAV F++ L  + ++ V LK  HS       LFT
Sbjct: 87  VLDQNLYYMGANLTSAGFASALINVLPAVTFVMALVLR-MEKVKLKSVHSQAKIAGTLFT 145

Query: 582 Q*VRNRTVHKDFHGHV 535
             V    +   +HG V
Sbjct: 146 --VAGAVLMVLYHGPV 159


>07_03_1415 +
           26410999-26411148,26411228-26411290,26412623-26412694,
           26412798-26412905,26413023-26413103,26413176-26413229,
           26413282-26413315,26413405-26413451,26413538-26413747,
           26413861-26413962,26414240-26414356,26414460-26414531,
           26414645-26414719,26414866-26414970
          Length = 429

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 157 GHFAGRIGLELYENHTHQH*QKLDNLETSCGRFRQLCSNLKDSL*XICK 11
           GH    I  E++E +   +  +L      C  +RQLC++L + L  ICK
Sbjct: 361 GHGNLLISAEVFEINESLYVVELKRSSGDCSLYRQLCASLSEDL-GICK 408


>03_06_0040 + 31240164-31241102,31241280-31241897
          Length = 518

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +1

Query: 571 PDSLSEERQKAQ-LQRMLDLKVNPIDGLASKWDY 669
           PD+ ++   +AQ L+ +LD ++NP+ G A+ WDY
Sbjct: 202 PDADTDMSMEAQELRHVLD-ELNPLIGAANLWDY 234


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,302,571
Number of Sequences: 37544
Number of extensions: 521347
Number of successful extensions: 1300
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)