Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_P17
(977 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 26 0.39
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 0.48
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 27 1.1
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 25 2.6
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 6.0
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 6.0
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 6.0
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 25.8 bits (54), Expect(2) = 0.39
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = -2
Query: 598 PPPPPPXKKXXGXGGGGXXFXXPSXPPPXPGXXKF 494
PPPPPP GG PP P F
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGF 619
Score = 24.2 bits (50), Expect = 6.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -2
Query: 601 PPPPPPPXKKXXGXGGGGXXFXXPSXPP 518
PPPPPP GG S PP
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPP 612
Score = 23.8 bits (49), Expect = 8.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 601 PPPPPPP 581
PPPPPPP
Sbjct: 530 PPPPPPP 536
Score = 23.8 bits (49), Expect = 8.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 644 PPPPGGGXFLXXXXXPPPPP 585
PPPP GG L PPP
Sbjct: 532 PPPPPGGAVLNIPPQFLPPP 551
Score = 20.6 bits (41), Expect(2) = 0.39
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -2
Query: 601 PPPPPPP 581
PPP PPP
Sbjct: 581 PPPAPPP 587
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.4 bits (53), Expect = 2.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 510 GXGGGXXGXXKXXPPPPXPXXFFXGGGGGGG 602
G GGG G P P GGGGGGG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPG----GGGGGGG 232
Score = 25.0 bits (52), Expect(2) = 0.48
Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 450 PPPXQKXGXGXPF-LKNFXXPGXGGGXXGXXKXXPPPPXPXXFFXGGGGGGG 602
PPP Q+ P + + G G P GGGGGGG
Sbjct: 124 PPPQQQQQQQAPLGIPSVAHGGGSGAIHASPNAQNPSSGGRSSSGGGGGGGG 175
Score = 24.2 bits (50), Expect = 6.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 583 GGGGGGXXXXXKKXPPPGGGG 645
GGG G P PGGGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGG 228
Score = 21.0 bits (42), Expect(2) = 0.48
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +3
Query: 582 GGGGGGGXXXXQKXPPPRXGG 644
GGG GG P P GG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGG 228
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 26.6 bits (56), Expect = 1.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -1
Query: 641 PPPGGGXFLXXXXXPPPPPPXKKXXXXXGG 552
P P F PPPPPP GG
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLSPGG 798
Score = 23.8 bits (49), Expect = 8.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 581 GGGGGGGXXXXPKKXPPPXGGXXXFXXXSPPXP 679
GGGG G + PP G SPP P
Sbjct: 127 GGGGYGHQGSMMRAMPPELGMYGGGCYGSPPVP 159
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 25.4 bits (53), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 581 GGGGGGGXXXXPKKXPP 631
GGGGGGG K PP
Sbjct: 394 GGGGGGGDGGSDGKKPP 410
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.2 bits (50), Expect = 6.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 581 GGGGGGGXXXXPKKXP 628
GGGGGGG P + P
Sbjct: 303 GGGGGGGGSAGPVQQP 318
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 24.2 bits (50), Expect = 6.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 581 GGGGGGGXXXXPKKXP 628
GGGGGGG P + P
Sbjct: 303 GGGGGGGGSAGPVQQP 318
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 24.2 bits (50), Expect = 6.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 581 GGGGGGGXXXXPKKXP 628
GGGGGGG P + P
Sbjct: 255 GGGGGGGGSAGPVQQP 270
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,693
Number of Sequences: 2352
Number of extensions: 12607
Number of successful extensions: 261
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106885740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -