Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P16
         (942 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.85 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   1.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   8.0  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 360 IPSSNLSIDCDICESFASINLSRLL 286
           +PS N ++DCD   +F +I L +LL
Sbjct: 640 VPSGNSTVDCDDVGTFGAI-LKKLL 663


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -1

Query: 426 NSKRVPLPPFLARNKATAPAFSIPSSNLSIDCDICESFASINLSRL 289
           +++  P P  L R   T PA ++  + L +D D C  +  ++LS L
Sbjct: 524 DARDAPAPFLLKRENYTLPASAVGIAWLYVDNDCCIRY-DVSLSGL 568


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 460 FVQKDRHVVQFQLKT 416
           FV  + HV QF LKT
Sbjct: 172 FVNVNAHVAQFTLKT 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,763
Number of Sequences: 336
Number of extensions: 3366
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26478848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)